Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 Y_RNA.114-201ENST00000363265 113 ntBASIC1.39□□□□□ -2.19
SOX2P48431 RNU6-690P-201ENST00000365242 106 ntBASIC1.39□□□□□ -2.19
SOX2P48431 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SOX2P48431 RNU6-406P-201ENST00000516470 107 ntBASIC1.39□□□□□ -2.19
SOX2P48431 RNU6-971P-201ENST00000516920 106 ntBASIC1.39□□□□□ -2.19
SOX2P48431 MIR3192-201ENST00000584920 77 ntBASIC1.39□□□□□ -2.19
SOX2P48431 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
SOX2P48431 RNU6-349P-201ENST00000362402 107 ntBASIC1.38□□□□□ -2.19
SOX2P48431 RNU6-647P-201ENST00000364243 107 ntBASIC1.38□□□□□ -2.19
SOX2P48431 Y_RNA.294-201ENST00000364916 102 ntBASIC1.38□□□□□ -2.19
SOX2P48431 RNA5SP261-201ENST00000410536 106 ntBASIC1.38□□□□□ -2.19
SOX2P48431 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.38□□□□□ -2.19
SOX2P48431 RNU6-548P-201ENST00000517083 115 ntBASIC1.38□□□□□ -2.19
SOX2P48431 DNAJC19P9-201ENST00000555084 351 ntBASIC1.38□□□□□ -2.19
SOX2P48431 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SOX2P48431 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SOX2P48431 RNU6-959P-201ENST00000384671 107 ntBASIC1.37□□□□□ -2.19
SOX2P48431 RNU6-913P-201ENST00000390913 95 ntBASIC1.37□□□□□ -2.19
SOX2P48431 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.37□□□□□ -2.19
SOX2P48431 AL133373.1-201ENST00000497098 94 ntBASIC1.37□□□□□ -2.19
SOX2P48431 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.37□□□□□ -2.19
SOX2P48431 RNU6-240P-201ENST00000516098 97 ntBASIC1.37□□□□□ -2.19
SOX2P48431 RNA5SP458-201ENST00000516188 119 ntBASIC1.37□□□□□ -2.19
SOX2P48431 RN7SKP88-201ENST00000516847 250 ntBASIC1.37□□□□□ -2.19
SOX2P48431 MIR3152-201ENST00000579801 74 ntBASIC1.37□□□□□ -2.19
SOX2P48431 MIR502-201ENST00000606349 86 ntBASIC1.37□□□□□ -2.19
SOX2P48431 AL020996.3-201ENST00000606617 222 ntBASIC1.37□□□□□ -2.19
SOX2P48431 7SK.8-201ENST00000612110 250 ntBASIC1.37□□□□□ -2.19
SOX2P48431 7SK.11-201ENST00000615477 250 ntBASIC1.37□□□□□ -2.19
SOX2P48431 7SK.13-201ENST00000622040 250 ntBASIC1.37□□□□□ -2.19
SOX2P48431 AL158147.1-201ENST00000443970 75 ntBASIC1.36□□□□□ -2.19
SOX2P48431 AC009474.2-201ENST00000451383 136 ntBASIC1.36□□□□□ -2.19
SOX2P48431 RNU6-165P-201ENST00000517170 99 ntBASIC1.36□□□□□ -2.19
SOX2P48431 AC015712.3-201ENST00000559380 164 ntBASIC1.36□□□□□ -2.19
SOX2P48431 AC133485.4-201ENST00000561835 220 ntBASIC1.36□□□□□ -2.19
SOX2P48431 AC138907.4-201ENST00000570107 226 ntBASIC1.36□□□□□ -2.19
SOX2P48431 MIR548AO-201ENST00000579992 96 ntBASIC1.36□□□□□ -2.19
SOX2P48431 AC021613.1-201ENST00000623880 111 ntBASIC1.36□□□□□ -2.19
SOX2P48431 SNORA1.1-201ENST00000364671 133 ntBASIC1.35□□□□□ -2.19
SOX2P48431 RNU4-16P-201ENST00000364737 141 ntBASIC1.35□□□□□ -2.19
SOX2P48431 Y_RNA.280-201ENST00000364765 112 ntBASIC1.35□□□□□ -2.19
SOX2P48431 MIR320A-201ENST00000385302 82 ntBASIC1.35□□□□□ -2.19
SOX2P48431 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.35□□□□□ -2.19
SOX2P48431 RNU6-1319P-201ENST00000390855 104 ntBASIC1.35□□□□□ -2.19
SOX2P48431 RNU6-747P-201ENST00000390928 104 ntBASIC1.35□□□□□ -2.19
SOX2P48431 RNU6-241P-201ENST00000391148 104 ntBASIC1.35□□□□□ -2.19
SOX2P48431 MIR1304-201ENST00000408243 91 ntBASIC1.35□□□□□ -2.19
SOX2P48431 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
SOX2P48431 RNU6-177P-201ENST00000411257 104 ntBASIC1.35□□□□□ -2.19
SOX2P48431 AL591806.2-201ENST00000433122 173 ntBASIC1.35□□□□□ -2.19
SOX2P48431 RNU7-45P-201ENST00000459460 63 ntBASIC1.35□□□□□ -2.19
SOX2P48431 SNORA31.4-201ENST00000516049 129 ntBASIC1.35□□□□□ -2.19
SOX2P48431 AL353997.5-201ENST00000618886 171 ntBASIC1.35□□□□□ -2.19
SOX2P48431 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SOX2P48431 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SOX2P48431 RNU6-235P-201ENST00000362644 107 ntBASIC1.34□□□□□ -2.19
SOX2P48431 SNORA25.3-201ENST00000363205 127 ntBASIC1.34□□□□□ -2.19
SOX2P48431 RNU6-80P-201ENST00000384195 107 ntBASIC1.34□□□□□ -2.19
SOX2P48431 U8.13-201ENST00000390842 128 ntBASIC1.34□□□□□ -2.19
SOX2P48431 RNU6-893P-201ENST00000458841 100 ntBASIC1.34□□□□□ -2.19
SOX2P48431 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.34□□□□□ -2.19
SOX2P48431 CYP3A52P-201ENST00000563326 91 ntBASIC1.34□□□□□ -2.19
SOX2P48431 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.34□□□□□ -2.19
SOX2P48431 HSPE1P19-201ENST00000603327 295 ntBASIC1.34□□□□□ -2.19
SOX2P48431 AC108081.1-201ENST00000604358 221 ntBASIC1.34□□□□□ -2.19
SOX2P48431 BX248123.2-201ENST00000606318 124 ntBASIC1.34□□□□□ -2.19
SOX2P48431 MIR8055-201ENST00000610739 97 ntBASIC1.34□□□□□ -2.19
SOX2P48431 MIR6845-201ENST00000613182 61 ntBASIC1.34□□□□□ -2.19
SOX2P48431 AL137067.1-201ENST00000615933 120 ntBASIC1.34□□□□□ -2.19
SOX2P48431 MIR6717-201ENST00000622747 73 ntBASIC1.34□□□□□ -2.19
SOX2P48431 AL161722.3-201ENST00000605789 2983 ntBASIC1.33□□□□□ -2.2
SOX2P48431 Y_RNA.218-201ENST00000364218 104 ntBASIC1.33□□□□□ -2.2
SOX2P48431 Y_RNA.366-201ENST00000365540 102 ntBASIC1.33□□□□□ -2.2
SOX2P48431 RNU6-1117P-201ENST00000384525 104 ntBASIC1.33□□□□□ -2.2
SOX2P48431 SNORA26.6-201ENST00000391256 115 ntBASIC1.33□□□□□ -2.2
SOX2P48431 RNU6-1190P-201ENST00000410811 104 ntBASIC1.33□□□□□ -2.2
SOX2P48431 RPS3AP1-201ENST00000413190 320 ntBASIC1.33□□□□□ -2.2
SOX2P48431 HMGN1P33-201ENST00000432945 451 ntBASIC1.33□□□□□ -2.2
SOX2P48431 Y_RNA.676-201ENST00000516393 96 ntBASIC1.33□□□□□ -2.2
SOX2P48431 MIR3683-201ENST00000580847 82 ntBASIC1.33□□□□□ -2.2
SOX2P48431 AC021443.1-201ENST00000604478 211 ntBASIC1.33□□□□□ -2.2
SOX2P48431 Z97988.1-201ENST00000637697 135 ntBASIC1.33□□□□□ -2.2
SOX2P48431 AL157777.2-201ENST00000258070 137 ntBASIC1.32□□□□□ -2.2
SOX2P48431 MIR103A2-201ENST00000362154 78 ntBASIC1.32□□□□□ -2.2
SOX2P48431 Y_RNA.71-201ENST00000362892 104 ntBASIC1.32□□□□□ -2.2
SOX2P48431 SNORD113-1-201ENST00000365321 69 ntBASIC1.32□□□□□ -2.2
SOX2P48431 Y_RNA.430-201ENST00000384081 110 ntBASIC1.32□□□□□ -2.2
SOX2P48431 SNORA19-201ENST00000384737 128 ntBASIC1.32□□□□□ -2.2
SOX2P48431 RNU6-1054P-201ENST00000411293 104 ntBASIC1.32□□□□□ -2.2
SOX2P48431 AC245047.7-201ENST00000440265 293 ntBASIC1.32□□□□□ -2.2
SOX2P48431 snoU13.25-201ENST00000458945 104 ntBASIC1.32□□□□□ -2.2
SOX2P48431 RN7SKP19-201ENST00000516016 252 ntBASIC1.32□□□□□ -2.2
SOX2P48431 SNORA25.15-201ENST00000516487 89 ntBASIC1.32□□□□□ -2.2
SOX2P48431 RNU6-1234P-201ENST00000516877 103 ntBASIC1.32□□□□□ -2.2
SOX2P48431 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
SOX2P48431 RNA5SP264-201ENST00000363115 107 ntBASIC1.31□□□□□ -2.2
SOX2P48431 Y_RNA.354-201ENST00000365448 111 ntBASIC1.31□□□□□ -2.2
SOX2P48431 SNORD116-14-201ENST00000383894 92 ntBASIC1.31□□□□□ -2.2
SOX2P48431 SNORD116-17-201ENST00000383929 92 ntBASIC1.31□□□□□ -2.2
SOX2P48431 SNORD116-15-201ENST00000384445 92 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms