Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 SNORA26.7-201ENST00000391288 122 ntBASIC2.76□□□□□ -1.97
CHRNA4P43681 AL138827.1-201ENST00000402666 306 ntBASIC2.76□□□□□ -1.97
CHRNA4P43681 RNA5SP344-201ENST00000411081 104 ntBASIC2.76□□□□□ -1.97
CHRNA4P43681 RNU6-602P-201ENST00000411155 105 ntBASIC2.76□□□□□ -1.97
CHRNA4P43681 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.76□□□□□ -1.97
CHRNA4P43681 AC087499.2-201ENST00000432861 149 ntBASIC2.76□□□□□ -1.97
CHRNA4P43681 AC245047.7-201ENST00000440265 293 ntBASIC2.76□□□□□ -1.97
CHRNA4P43681 RNU7-48P-201ENST00000458875 63 ntBASIC2.76□□□□□ -1.97
CHRNA4P43681 CKS1BP2-201ENST00000497342 240 ntBASIC2.76□□□□□ -1.97
CHRNA4P43681 RN7SKP132-201ENST00000516001 208 ntBASIC2.76□□□□□ -1.97
CHRNA4P43681 SNORA9.3-201ENST00000516383 129 ntBASIC2.76□□□□□ -1.97
CHRNA4P43681 RNU6-70P-201ENST00000516438 60 ntBASIC2.76□□□□□ -1.97
CHRNA4P43681 RNU7-137P-201ENST00000516788 62 ntBASIC2.76□□□□□ -1.97
CHRNA4P43681 MIR8054-201ENST00000620877 86 ntBASIC2.76□□□□□ -1.97
CHRNA4P43681 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.76□□□□□ -1.97
CHRNA4P43681 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CHRNA4P43681 RNU6-161P-201ENST00000363051 106 ntBASIC2.75□□□□□ -1.97
CHRNA4P43681 Y_RNA.98-201ENST00000363109 102 ntBASIC2.75□□□□□ -1.97
CHRNA4P43681 RNU6-800P-201ENST00000384473 103 ntBASIC2.75□□□□□ -1.97
CHRNA4P43681 RNA5SP109-201ENST00000391010 116 ntBASIC2.75□□□□□ -1.97
CHRNA4P43681 RNU6-807P-201ENST00000516805 107 ntBASIC2.75□□□□□ -1.97
CHRNA4P43681 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.75□□□□□ -1.97
CHRNA4P43681 MIR4796-201ENST00000580742 81 ntBASIC2.75□□□□□ -1.97
CHRNA4P43681 MIR4672-201ENST00000583126 81 ntBASIC2.75□□□□□ -1.97
CHRNA4P43681 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.75□□□□□ -1.97
CHRNA4P43681 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.75□□□□□ -1.97
CHRNA4P43681 MIR1297-201ENST00000637311 77 ntBASIC2.75□□□□□ -1.97
CHRNA4P43681 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CHRNA4P43681 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CHRNA4P43681 SNORA68.1-201ENST00000364537 132 ntBASIC2.74□□□□□ -1.97
CHRNA4P43681 SNORA25.9-201ENST00000365087 128 ntBASIC2.74□□□□□ -1.97
CHRNA4P43681 Y_RNA.508-201ENST00000384502 114 ntBASIC2.74□□□□□ -1.97
CHRNA4P43681 RNU6-160P-201ENST00000384591 107 ntBASIC2.74□□□□□ -1.97
CHRNA4P43681 RNU6-667P-201ENST00000517186 102 ntBASIC2.74□□□□□ -1.97
CHRNA4P43681 AP001362.1-201ENST00000625165 124 ntBASIC2.74□□□□□ -1.97
CHRNA4P43681 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.73□□□□□ -1.97
CHRNA4P43681 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CHRNA4P43681 HSBP1P2-201ENST00000299671 229 ntBASIC2.73□□□□□ -1.97
CHRNA4P43681 RNU6-296P-201ENST00000384608 107 ntBASIC2.73□□□□□ -1.97
CHRNA4P43681 RNU6-540P-201ENST00000384622 101 ntBASIC2.73□□□□□ -1.97
CHRNA4P43681 RNU6-1086P-201ENST00000410930 100 ntBASIC2.73□□□□□ -1.97
CHRNA4P43681 RNU7-85P-201ENST00000458851 63 ntBASIC2.73□□□□□ -1.97
CHRNA4P43681 RNU6-1108P-201ENST00000516308 104 ntBASIC2.73□□□□□ -1.97
CHRNA4P43681 MIR3945-201ENST00000581853 98 ntBASIC2.73□□□□□ -1.97
CHRNA4P43681 AL512598.1-201ENST00000610158 273 ntBASIC2.73□□□□□ -1.97
CHRNA4P43681 AC105081.1-201ENST00000617727 106 ntBASIC2.73□□□□□ -1.97
CHRNA4P43681 AC243994.1-201ENST00000618627 109 ntBASIC2.73□□□□□ -1.97
CHRNA4P43681 U6.111-201ENST00000636093 83 ntBASIC2.73□□□□□ -1.97
CHRNA4P43681 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHRNA4P43681 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CHRNA4P43681 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.72□□□□□ -1.97
CHRNA4P43681 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.72□□□□□ -1.97
CHRNA4P43681 RNA5SP432-201ENST00000362480 116 ntBASIC2.72□□□□□ -1.97
CHRNA4P43681 RNU5F-1-201ENST00000362507 117 ntBASIC2.72□□□□□ -1.97
CHRNA4P43681 RNU6-587P-201ENST00000391282 106 ntBASIC2.72□□□□□ -1.97
CHRNA4P43681 SNORD30.1-201ENST00000391309 70 ntBASIC2.72□□□□□ -1.97
CHRNA4P43681 SNORD88.1-201ENST00000408684 91 ntBASIC2.72□□□□□ -1.97
CHRNA4P43681 HMGN1P33-201ENST00000432945 451 ntBASIC2.72□□□□□ -1.97
CHRNA4P43681 AC105272.1-201ENST00000438604 198 ntBASIC2.72□□□□□ -1.97
CHRNA4P43681 AC018868.1-201ENST00000491307 315 ntBASIC2.72□□□□□ -1.97
CHRNA4P43681 RNU7-79P-201ENST00000516082 62 ntBASIC2.72□□□□□ -1.97
CHRNA4P43681 MIR8065-201ENST00000620577 100 ntBASIC2.72□□□□□ -1.97
CHRNA4P43681 MIR6733-201ENST00000635723 61 ntBASIC2.72□□□□□ -1.97
CHRNA4P43681 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.72□□□□□ -1.97
CHRNA4P43681 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.97
CHRNA4P43681 MIR449A-201ENST00000362113 91 ntBASIC2.71□□□□□ -1.98
CHRNA4P43681 MIR520H-201ENST00000385126 88 ntBASIC2.71□□□□□ -1.98
CHRNA4P43681 MIR516B2-201ENST00000385190 85 ntBASIC2.71□□□□□ -1.98
CHRNA4P43681 U8.16-201ENST00000391279 133 ntBASIC2.71□□□□□ -1.98
CHRNA4P43681 RNA5SP21-201ENST00000410917 96 ntBASIC2.71□□□□□ -1.98
CHRNA4P43681 RNA5SP492-201ENST00000411330 114 ntBASIC2.71□□□□□ -1.98
CHRNA4P43681 MIR4484-201ENST00000582855 83 ntBASIC2.71□□□□□ -1.98
CHRNA4P43681 MIR8055-201ENST00000610739 97 ntBASIC2.71□□□□□ -1.98
CHRNA4P43681 MIR8066-201ENST00000617280 78 ntBASIC2.71□□□□□ -1.98
CHRNA4P43681 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CHRNA4P43681 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.71□□□□□ -1.98
CHRNA4P43681 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.7□□□□□ -1.98
CHRNA4P43681 MIR635-201ENST00000384830 98 ntBASIC2.7□□□□□ -1.98
CHRNA4P43681 MIR452-201ENST00000385020 85 ntBASIC2.7□□□□□ -1.98
CHRNA4P43681 MIR561-201ENST00000385216 97 ntBASIC2.7□□□□□ -1.98
CHRNA4P43681 SNORA31.10-201ENST00000516482 106 ntBASIC2.7□□□□□ -1.98
CHRNA4P43681 MIR4635-201ENST00000583759 79 ntBASIC2.7□□□□□ -1.98
CHRNA4P43681 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.7□□□□□ -1.98
CHRNA4P43681 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.7□□□□□ -1.98
CHRNA4P43681 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CHRNA4P43681 RNU1-109P-201ENST00000383960 147 ntBASIC2.69□□□□□ -1.98
CHRNA4P43681 MIR136-201ENST00000385207 82 ntBASIC2.69□□□□□ -1.98
CHRNA4P43681 MIR1262-201ENST00000408276 93 ntBASIC2.69□□□□□ -1.98
CHRNA4P43681 MIR548AR-201ENST00000582191 57 ntBASIC2.69□□□□□ -1.98
CHRNA4P43681 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.69□□□□□ -1.98
CHRNA4P43681 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CHRNA4P43681 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CHRNA4P43681 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.68□□□□□ -1.98
CHRNA4P43681 Y_RNA.354-201ENST00000365448 111 ntBASIC2.68□□□□□ -1.98
CHRNA4P43681 RNU6-1072P-201ENST00000384703 107 ntBASIC2.68□□□□□ -1.98
CHRNA4P43681 RNU6-443P-201ENST00000384780 107 ntBASIC2.68□□□□□ -1.98
CHRNA4P43681 SNORD28B-201ENST00000390993 75 ntBASIC2.68□□□□□ -1.98
CHRNA4P43681 RNU6-141P-201ENST00000410499 105 ntBASIC2.68□□□□□ -1.98
CHRNA4P43681 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.68□□□□□ -1.98
CHRNA4P43681 GTF3AP2-201ENST00000557014 266 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms