Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 Y_RNA.247-201ENST00000364500 92 ntBASIC3.1□□□□□ -1.91
CLCN1P35523 RNU6-497P-201ENST00000365316 104 ntBASIC3.1□□□□□ -1.91
CLCN1P35523 RNU6-813P-201ENST00000384691 107 ntBASIC3.1□□□□□ -1.91
CLCN1P35523 RNU6-1086P-201ENST00000410930 100 ntBASIC3.1□□□□□ -1.91
CLCN1P35523 UBL5P1-201ENST00000507979 193 ntBASIC3.1□□□□□ -1.91
CLCN1P35523 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.1□□□□□ -1.91
CLCN1P35523 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLCN1P35523 RPS29P28-201ENST00000446439 141 ntBASIC3.09□□□□□ -1.91
CLCN1P35523 RN7SL429P-201ENST00000479090 223 ntBASIC3.09□□□□□ -1.91
CLCN1P35523 RN7SL489P-201ENST00000486185 223 ntBASIC3.09□□□□□ -1.91
CLCN1P35523 RN7SL327P-201ENST00000488659 223 ntBASIC3.09□□□□□ -1.91
CLCN1P35523 RNA5SP341-201ENST00000516261 117 ntBASIC3.09□□□□□ -1.91
CLCN1P35523 RNA5SP82-201ENST00000516707 92 ntBASIC3.09□□□□□ -1.91
CLCN1P35523 MIR4529-201ENST00000578110 78 ntBASIC3.09□□□□□ -1.91
CLCN1P35523 RN7SL853P-201ENST00000617250 223 ntBASIC3.09□□□□□ -1.91
CLCN1P35523 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.09□□□□□ -1.91
CLCN1P35523 SNORD38.1-201ENST00000363863 68 ntBASIC3.08□□□□□ -1.92
CLCN1P35523 RNU6-865P-201ENST00000364772 107 ntBASIC3.08□□□□□ -1.92
CLCN1P35523 SNORA9.2-201ENST00000365361 133 ntBASIC3.08□□□□□ -1.92
CLCN1P35523 U8.15-201ENST00000390947 134 ntBASIC3.08□□□□□ -1.92
CLCN1P35523 RNU6-602P-201ENST00000411155 105 ntBASIC3.08□□□□□ -1.92
CLCN1P35523 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.08□□□□□ -1.92
CLCN1P35523 DEFB122-202ENST00000569013 197 ntBASIC3.08□□□□□ -1.92
CLCN1P35523 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CLCN1P35523 MIR26A1-201ENST00000362205 77 ntBASIC3.07□□□□□ -1.92
CLCN1P35523 SNORD116-10-201ENST00000363791 102 ntBASIC3.07□□□□□ -1.92
CLCN1P35523 SNORA3A-201ENST00000364113 130 ntBASIC3.07□□□□□ -1.92
CLCN1P35523 RNU6-1124P-201ENST00000384169 107 ntBASIC3.07□□□□□ -1.92
CLCN1P35523 RNU6-301P-201ENST00000384277 107 ntBASIC3.07□□□□□ -1.92
CLCN1P35523 RNU6-1307P-201ENST00000391012 103 ntBASIC3.07□□□□□ -1.92
CLCN1P35523 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.07□□□□□ -1.92
CLCN1P35523 RNU7-79P-201ENST00000516082 62 ntBASIC3.07□□□□□ -1.92
CLCN1P35523 SNORD67.1-201ENST00000516618 108 ntBASIC3.07□□□□□ -1.92
CLCN1P35523 SNORA31.25-201ENST00000517242 134 ntBASIC3.07□□□□□ -1.92
CLCN1P35523 ELOCP29-201ENST00000588193 334 ntBASIC3.07□□□□□ -1.92
CLCN1P35523 RNU6-86P-201ENST00000606534 107 ntBASIC3.07□□□□□ -1.92
CLCN1P35523 MIR7106-201ENST00000612419 65 ntBASIC3.07□□□□□ -1.92
CLCN1P35523 AC005336.3-201ENST00000623833 2679 ntBASIC3.07□□□□□ -1.92
CLCN1P35523 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.07□□□□□ -1.92
CLCN1P35523 SNORA5B-201ENST00000363786 132 ntBASIC3.06□□□□□ -1.92
CLCN1P35523 RNU6-203P-201ENST00000384038 104 ntBASIC3.06□□□□□ -1.92
CLCN1P35523 Y_RNA.448-201ENST00000384185 108 ntBASIC3.06□□□□□ -1.92
CLCN1P35523 RNU6-675P-201ENST00000384236 104 ntBASIC3.06□□□□□ -1.92
CLCN1P35523 MIR34C-201ENST00000384831 77 ntBASIC3.06□□□□□ -1.92
CLCN1P35523 S100A11P2-201ENST00000467589 312 ntBASIC3.06□□□□□ -1.92
CLCN1P35523 RNU6-322P-201ENST00000516010 103 ntBASIC3.06□□□□□ -1.92
CLCN1P35523 RNA5SP367-201ENST00000516557 118 ntBASIC3.06□□□□□ -1.92
CLCN1P35523 MIR3202-2-201ENST00000635980 79 ntBASIC3.06□□□□□ -1.92
CLCN1P35523 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLCN1P35523 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.05□□□□□ -1.92
CLCN1P35523 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.05□□□□□ -1.92
CLCN1P35523 RNU6-228P-201ENST00000362700 106 ntBASIC3.05□□□□□ -1.92
CLCN1P35523 Y_RNA.140-201ENST00000363474 103 ntBASIC3.05□□□□□ -1.92
CLCN1P35523 RNU6-1276P-201ENST00000365372 104 ntBASIC3.05□□□□□ -1.92
CLCN1P35523 RNU7-193P-201ENST00000516723 65 ntBASIC3.05□□□□□ -1.92
CLCN1P35523 RNU6-1006P-201ENST00000516998 103 ntBASIC3.05□□□□□ -1.92
CLCN1P35523 MIR548AO-201ENST00000579992 96 ntBASIC3.05□□□□□ -1.92
CLCN1P35523 AC104984.5-201ENST00000586878 94 ntBASIC3.05□□□□□ -1.92
CLCN1P35523 AC103810.7-201ENST00000607821 91 ntBASIC3.05□□□□□ -1.92
CLCN1P35523 MIR4251-201ENST00000635819 61 ntBASIC3.05□□□□□ -1.92
CLCN1P35523 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.04□□□□□ -1.92
CLCN1P35523 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLCN1P35523 SNORD58A-201ENST00000383875 65 ntBASIC3.04□□□□□ -1.92
CLCN1P35523 RNU6-851P-201ENST00000384565 107 ntBASIC3.04□□□□□ -1.92
CLCN1P35523 RNU6-1237P-201ENST00000384777 107 ntBASIC3.04□□□□□ -1.92
CLCN1P35523 RPS12P2-201ENST00000439728 269 ntBASIC3.04□□□□□ -1.92
CLCN1P35523 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.04□□□□□ -1.92
CLCN1P35523 AC105081.1-201ENST00000617727 106 ntBASIC3.04□□□□□ -1.92
CLCN1P35523 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CLCN1P35523 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.04□□□□□ -1.92
CLCN1P35523 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.03□□□□□ -1.92
CLCN1P35523 SNORA80A-201ENST00000363922 136 ntBASIC3.03□□□□□ -1.92
CLCN1P35523 RNU1-52P-201ENST00000384190 164 ntBASIC3.03□□□□□ -1.92
CLCN1P35523 AL445685.2-201ENST00000422551 342 ntBASIC3.03□□□□□ -1.92
CLCN1P35523 RPL31P63-201ENST00000422565 375 ntBASIC3.03□□□□□ -1.92
CLCN1P35523 AL139132.1-201ENST00000431587 344 ntBASIC3.03□□□□□ -1.92
CLCN1P35523 RNU6-267P-201ENST00000516714 103 ntBASIC3.03□□□□□ -1.92
CLCN1P35523 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLCN1P35523 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
CLCN1P35523 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
CLCN1P35523 RNU6-1163P-201ENST00000364516 107 ntBASIC3.02□□□□□ -1.93
CLCN1P35523 SNORD38B-201ENST00000384690 67 ntBASIC3.02□□□□□ -1.93
CLCN1P35523 AC004965.1-201ENST00000413033 213 ntBASIC3.02□□□□□ -1.93
CLCN1P35523 EEF1A1P41-201ENST00000414667 207 ntBASIC3.02□□□□□ -1.93
CLCN1P35523 AC022018.1-201ENST00000430685 241 ntBASIC3.02□□□□□ -1.93
CLCN1P35523 MIR4668-201ENST00000582284 70 ntBASIC3.02□□□□□ -1.93
CLCN1P35523 MIR5194-201ENST00000582634 120 ntBASIC3.02□□□□□ -1.93
CLCN1P35523 MIR3935-201ENST00000583472 104 ntBASIC3.02□□□□□ -1.93
CLCN1P35523 SNORD38B-202ENST00000625943 69 ntBASIC3.02□□□□□ -1.93
CLCN1P35523 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLCN1P35523 SNORD114-10-201ENST00000363409 72 ntBASIC3.01□□□□□ -1.93
CLCN1P35523 RNA5SP225-201ENST00000410874 135 ntBASIC3.01□□□□□ -1.93
CLCN1P35523 RNU7-137P-201ENST00000516788 62 ntBASIC3.01□□□□□ -1.93
CLCN1P35523 MIR6715A-201ENST00000615929 79 ntBASIC3.01□□□□□ -1.93
CLCN1P35523 AL137790.1-201ENST00000634283 177 ntBASIC3.01□□□□□ -1.93
CLCN1P35523 RNU6-219P-201ENST00000364728 107 ntBASIC3□□□□□ -1.93
CLCN1P35523 SNORA44-201ENST00000384584 132 ntBASIC3□□□□□ -1.93
CLCN1P35523 RNY1P4-201ENST00000384595 115 ntBASIC3□□□□□ -1.93
CLCN1P35523 RNU6-1321P-201ENST00000390905 107 ntBASIC3□□□□□ -1.93
CLCN1P35523 RAB6C-AS1-202ENST00000433431 123 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms