Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 Y_RNA.220-201ENST00000364244 109 ntBASIC2.51□□□□□ -2.01
LIG1P18858 Y_RNA.466-201ENST00000384294 113 ntBASIC2.51□□□□□ -2.01
LIG1P18858 MIR660-201ENST00000385235 97 ntBASIC2.51□□□□□ -2.01
LIG1P18858 RNA5SP338-201ENST00000410495 85 ntBASIC2.51□□□□□ -2.01
LIG1P18858 RNA5SP261-201ENST00000410536 106 ntBASIC2.51□□□□□ -2.01
LIG1P18858 RNU2-40P-201ENST00000410833 196 ntBASIC2.51□□□□□ -2.01
LIG1P18858 RN7SKP192-201ENST00000411291 327 ntBASIC2.51□□□□□ -2.01
LIG1P18858 RNU7-45P-201ENST00000459460 63 ntBASIC2.51□□□□□ -2.01
LIG1P18858 RPL23AP42-201ENST00000471152 471 ntBASIC2.51□□□□□ -2.01
LIG1P18858 RNU6-1258P-201ENST00000516911 111 ntBASIC2.51□□□□□ -2.01
LIG1P18858 MIR4709-201ENST00000577272 72 ntBASIC2.51□□□□□ -2.01
LIG1P18858 MIR6841-201ENST00000637129 72 ntBASIC2.51□□□□□ -2.01
LIG1P18858 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
LIG1P18858 U8.2-201ENST00000363156 134 ntBASIC2.5□□□□□ -2.01
LIG1P18858 Y_RNA.430-201ENST00000384081 110 ntBASIC2.5□□□□□ -2.01
LIG1P18858 MIR221-201ENST00000385135 110 ntBASIC2.5□□□□□ -2.01
LIG1P18858 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
LIG1P18858 SNORA26.6-201ENST00000391256 115 ntBASIC2.5□□□□□ -2.01
LIG1P18858 Y_RNA.601-201ENST00000410500 113 ntBASIC2.5□□□□□ -2.01
LIG1P18858 RNU7-73P-201ENST00000458743 63 ntBASIC2.5□□□□□ -2.01
LIG1P18858 RNU7-67P-201ENST00000459003 62 ntBASIC2.5□□□□□ -2.01
LIG1P18858 RNU7-113P-201ENST00000459273 62 ntBASIC2.5□□□□□ -2.01
LIG1P18858 snoU13.27-201ENST00000459278 104 ntBASIC2.5□□□□□ -2.01
LIG1P18858 AC099513.1-201ENST00000490423 301 ntBASIC2.5□□□□□ -2.01
LIG1P18858 SCARNA23-201ENST00000516060 130 ntBASIC2.5□□□□□ -2.01
LIG1P18858 RNU6-958P-201ENST00000516995 106 ntBASIC2.5□□□□□ -2.01
LIG1P18858 DNAJC19P9-201ENST00000555084 351 ntBASIC2.5□□□□□ -2.01
LIG1P18858 AC024614.2-201ENST00000577584 372 ntBASIC2.5□□□□□ -2.01
LIG1P18858 MIR548AR-201ENST00000582191 57 ntBASIC2.5□□□□□ -2.01
LIG1P18858 AL096840.1-201ENST00000603287 93 ntBASIC2.5□□□□□ -2.01
LIG1P18858 Y_RNA.773-201ENST00000607168 90 ntBASIC2.5□□□□□ -2.01
LIG1P18858 AL442128.1-201ENST00000615151 90 ntBASIC2.5□□□□□ -2.01
LIG1P18858 RNY3P2-201ENST00000362918 102 ntBASIC2.49□□□□□ -2.01
LIG1P18858 Y_RNA.107-201ENST00000363190 121 ntBASIC2.49□□□□□ -2.01
LIG1P18858 Y_RNA.171-201ENST00000363760 102 ntBASIC2.49□□□□□ -2.01
LIG1P18858 RNA5SP37-201ENST00000365420 130 ntBASIC2.49□□□□□ -2.01
LIG1P18858 RNU7-34P-201ENST00000459394 64 ntBASIC2.49□□□□□ -2.01
LIG1P18858 RNU6-844P-201ENST00000517175 102 ntBASIC2.49□□□□□ -2.01
LIG1P18858 MIR4694-201ENST00000578534 80 ntBASIC2.49□□□□□ -2.01
LIG1P18858 MIR3124-201ENST00000582636 67 ntBASIC2.49□□□□□ -2.01
LIG1P18858 FAM71BP1-201ENST00000604431 523 ntBASIC2.49□□□□□ -2.01
LIG1P18858 U1.36-201ENST00000620684 176 ntBASIC2.49□□□□□ -2.01
LIG1P18858 MIR1255B1-201ENST00000636325 63 ntBASIC2.49□□□□□ -2.01
LIG1P18858 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LIG1P18858 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LIG1P18858 Y_RNA.10-201ENST00000362371 110 ntBASIC2.48□□□□□ -2.01
LIG1P18858 SNORA22.1-201ENST00000362701 134 ntBASIC2.48□□□□□ -2.01
LIG1P18858 RNU4-67P-201ENST00000364569 141 ntBASIC2.48□□□□□ -2.01
LIG1P18858 RNA5SP160-201ENST00000364866 120 ntBASIC2.48□□□□□ -2.01
LIG1P18858 MIR526A1-201ENST00000384897 85 ntBASIC2.48□□□□□ -2.01
LIG1P18858 RNU6-733P-201ENST00000410759 104 ntBASIC2.48□□□□□ -2.01
LIG1P18858 RNY4P29-201ENST00000410801 97 ntBASIC2.48□□□□□ -2.01
LIG1P18858 PGBD4P5-201ENST00000445958 426 ntBASIC2.48□□□□□ -2.01
LIG1P18858 RNU6-717P-201ENST00000459076 104 ntBASIC2.48□□□□□ -2.01
LIG1P18858 SNORD123-201ENST00000459473 70 ntBASIC2.48□□□□□ -2.01
LIG1P18858 SNORA26.2-201ENST00000390922 122 ntBASIC2.47□□□□□ -2.01
LIG1P18858 SNORD28B-201ENST00000390993 75 ntBASIC2.47□□□□□ -2.01
LIG1P18858 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.47□□□□□ -2.01
LIG1P18858 RPS3AP1-201ENST00000413190 320 ntBASIC2.47□□□□□ -2.01
LIG1P18858 MIR4448-201ENST00000584360 86 ntBASIC2.47□□□□□ -2.01
LIG1P18858 AC104984.5-201ENST00000586878 94 ntBASIC2.47□□□□□ -2.01
LIG1P18858 MALAT1.1-201ENST00000618249 95 ntBASIC2.47□□□□□ -2.01
LIG1P18858 AC243994.1-201ENST00000618627 109 ntBASIC2.47□□□□□ -2.01
LIG1P18858 MIR6717-201ENST00000622747 73 ntBASIC2.47□□□□□ -2.01
LIG1P18858 MIR424-201ENST00000362227 98 ntBASIC2.46□□□□□ -2.02
LIG1P18858 Y_RNA.155-201ENST00000363632 101 ntBASIC2.46□□□□□ -2.02
LIG1P18858 Y_RNA.360-201ENST00000365512 102 ntBASIC2.46□□□□□ -2.02
LIG1P18858 RNU6-409P-201ENST00000384114 104 ntBASIC2.46□□□□□ -2.02
LIG1P18858 Y_RNA.470-201ENST00000384307 117 ntBASIC2.46□□□□□ -2.02
LIG1P18858 Y_RNA.537-201ENST00000384626 109 ntBASIC2.46□□□□□ -2.02
LIG1P18858 RNU6-1067P-201ENST00000384752 107 ntBASIC2.46□□□□□ -2.02
LIG1P18858 MIR577-201ENST00000385196 96 ntBASIC2.46□□□□□ -2.02
LIG1P18858 RNA5SP425-201ENST00000410336 112 ntBASIC2.46□□□□□ -2.02
LIG1P18858 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.46□□□□□ -2.02
LIG1P18858 RNU6-762P-201ENST00000517107 102 ntBASIC2.46□□□□□ -2.02
LIG1P18858 AL513534.2-201ENST00000603836 250 ntBASIC2.46□□□□□ -2.02
LIG1P18858 AL020996.3-201ENST00000606617 222 ntBASIC2.46□□□□□ -2.02
LIG1P18858 MIR4791-201ENST00000607666 84 ntBASIC2.46□□□□□ -2.02
LIG1P18858 AL773524.1-201ENST00000614065 229 ntBASIC2.46□□□□□ -2.02
LIG1P18858 SNORD3E-202ENST00000627253 216 ntBASIC2.46□□□□□ -2.02
LIG1P18858 AC080100.1-201ENST00000624239 5356 ntBASIC2.46□□□□□ -2.02
LIG1P18858 RNU6-832P-201ENST00000363319 107 ntBASIC2.45□□□□□ -2.02
LIG1P18858 Y_RNA.342-201ENST00000365352 113 ntBASIC2.45□□□□□ -2.02
LIG1P18858 RNY1P7-201ENST00000384743 110 ntBASIC2.45□□□□□ -2.02
LIG1P18858 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LIG1P18858 RNA5SP33-201ENST00000516687 98 ntBASIC2.45□□□□□ -2.02
LIG1P18858 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LIG1P18858 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
LIG1P18858 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
LIG1P18858 Y_RNA.388-201ENST00000383919 113 ntBASIC2.44□□□□□ -2.02
LIG1P18858 SNORA70B-201ENST00000384210 135 ntBASIC2.44□□□□□ -2.02
LIG1P18858 RNU6-913P-201ENST00000390913 95 ntBASIC2.44□□□□□ -2.02
LIG1P18858 RN7SKP223-201ENST00000410582 62 ntBASIC2.44□□□□□ -2.02
LIG1P18858 RNA5SP100-201ENST00000410903 110 ntBASIC2.44□□□□□ -2.02
LIG1P18858 RNA5SP59-201ENST00000410922 110 ntBASIC2.44□□□□□ -2.02
LIG1P18858 AC096949.1-201ENST00000412047 152 ntBASIC2.44□□□□□ -2.02
LIG1P18858 AC244636.1-201ENST00000421152 228 ntBASIC2.44□□□□□ -2.02
LIG1P18858 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.44□□□□□ -2.02
LIG1P18858 MIR548AE2-201ENST00000583456 67 ntBASIC2.44□□□□□ -2.02
LIG1P18858 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms