Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SNRPGP8-201ENST00000454064 226 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 RNU7-67P-201ENST00000459003 62 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 RNA5SP436-201ENST00000516020 115 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 AP003484.1-201ENST00000530974 250 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 MIR4264-201ENST00000583520 66 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 AC097639.2-201ENST00000603159 172 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 AL590095.2-201ENST00000604136 117 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 AL442067.1-201ENST00000613261 223 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 AC023934.1-201ENST00000574529 2389 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 SNORD45.3-201ENST00000363836 72 ntBASIC0.69□□□□□ -2.3
PDGFRAP16234 Y_RNA.288-201ENST00000364854 92 ntBASIC0.69□□□□□ -2.3
PDGFRAP16234 RNU4-17P-201ENST00000365598 141 ntBASIC0.69□□□□□ -2.3
PDGFRAP16234 SNORD105-201ENST00000386910 85 ntBASIC0.69□□□□□ -2.3
PDGFRAP16234 RNU2-70P-201ENST00000410718 179 ntBASIC0.69□□□□□ -2.3
PDGFRAP16234 AF228730.3-201ENST00000436691 102 ntBASIC0.69□□□□□ -2.3
PDGFRAP16234 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.69□□□□□ -2.3
PDGFRAP16234 Y_RNA.668-201ENST00000516233 93 ntBASIC0.69□□□□□ -2.3
PDGFRAP16234 RNU6-504P-201ENST00000516568 104 ntBASIC0.69□□□□□ -2.3
PDGFRAP16234 AC004812.1-201ENST00000540773 146 ntBASIC0.69□□□□□ -2.3
PDGFRAP16234 AC134878.1-201ENST00000619901 243 ntBASIC0.69□□□□□ -2.3
PDGFRAP16234 RNU6-913P-201ENST00000390913 95 ntBASIC0.68□□□□□ -2.3
PDGFRAP16234 RNU6-1228P-201ENST00000391014 107 ntBASIC0.68□□□□□ -2.3
PDGFRAP16234 SNORA26-201ENST00000391286 122 ntBASIC0.68□□□□□ -2.3
PDGFRAP16234 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.68□□□□□ -2.3
PDGFRAP16234 RNU7-73P-201ENST00000458743 63 ntBASIC0.68□□□□□ -2.3
PDGFRAP16234 RNU6-561P-201ENST00000516222 102 ntBASIC0.68□□□□□ -2.3
PDGFRAP16234 RNA5SP153-201ENST00000516498 76 ntBASIC0.68□□□□□ -2.3
PDGFRAP16234 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
PDGFRAP16234 Y_RNA.23-201ENST00000362496 106 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 Y_RNA.162-201ENST00000363683 102 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 Y_RNA.199-201ENST00000364014 102 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 Y_RNA.262-201ENST00000364641 102 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 Y_RNA.292-201ENST00000364904 97 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 SNORA27-201ENST00000384323 126 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 RNU6-205P-201ENST00000390858 107 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 RNU1-119P-201ENST00000391122 165 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 MIR548H3-201ENST00000408771 118 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 AC244098.3-201ENST00000424803 96 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 RNU6-1132P-201ENST00000459214 107 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 RPS29P24-201ENST00000486345 171 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 MTND1P19-201ENST00000511780 315 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 RNU6-958P-201ENST00000516995 106 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 MIR4719-201ENST00000585233 84 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 MIR376A2-201ENST00000636782 80 ntBASIC0.67□□□□□ -2.3
PDGFRAP16234 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
PDGFRAP16234 RNU6-369P-201ENST00000362515 102 ntBASIC0.66□□□□□ -2.3
PDGFRAP16234 SNORA1-201ENST00000384107 130 ntBASIC0.66□□□□□ -2.3
PDGFRAP16234 AC244023.1-201ENST00000426884 112 ntBASIC0.66□□□□□ -2.3
PDGFRAP16234 snoU13.21-201ENST00000459368 105 ntBASIC0.66□□□□□ -2.3
PDGFRAP16234 RNU6-1045P-201ENST00000516321 107 ntBASIC0.66□□□□□ -2.3
PDGFRAP16234 AC242498.1-201ENST00000604134 111 ntBASIC0.66□□□□□ -2.3
PDGFRAP16234 MIR8055-201ENST00000610739 97 ntBASIC0.66□□□□□ -2.3
PDGFRAP16234 AC099654.10-201ENST00000640395 161 ntBASIC0.66□□□□□ -2.3
PDGFRAP16234 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.65□□□□□ -2.31
PDGFRAP16234 SNORD27-201ENST00000363981 72 ntBASIC0.65□□□□□ -2.31
PDGFRAP16234 RNU1-133P-201ENST00000364867 167 ntBASIC0.65□□□□□ -2.31
PDGFRAP16234 RNU6-934P-201ENST00000365154 107 ntBASIC0.65□□□□□ -2.31
PDGFRAP16234 Y_RNA.440-201ENST00000384120 114 ntBASIC0.65□□□□□ -2.31
PDGFRAP16234 Y_RNA.539-201ENST00000384635 107 ntBASIC0.65□□□□□ -2.31
PDGFRAP16234 SNORD77.3-201ENST00000391113 65 ntBASIC0.65□□□□□ -2.31
PDGFRAP16234 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.65□□□□□ -2.31
PDGFRAP16234 HMGN1P33-201ENST00000432945 451 ntBASIC0.65□□□□□ -2.31
PDGFRAP16234 RNY3P16-201ENST00000516338 101 ntBASIC0.65□□□□□ -2.31
PDGFRAP16234 AC011195.1-201ENST00000578177 177 ntBASIC0.65□□□□□ -2.31
PDGFRAP16234 Y_RNA.477-201ENST00000384352 108 ntBASIC0.64□□□□□ -2.31
PDGFRAP16234 Y_RNA.556-201ENST00000384677 113 ntBASIC0.64□□□□□ -2.31
PDGFRAP16234 MIR1302-3-201ENST00000408128 138 ntBASIC0.64□□□□□ -2.31
PDGFRAP16234 RNU6-1190P-201ENST00000410811 104 ntBASIC0.64□□□□□ -2.31
PDGFRAP16234 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.64□□□□□ -2.31
PDGFRAP16234 AL138752.1-201ENST00000452964 351 ntBASIC0.64□□□□□ -2.31
PDGFRAP16234 Y_RNA.680-201ENST00000516441 93 ntBASIC0.64□□□□□ -2.31
PDGFRAP16234 RNU7-53P-201ENST00000516705 60 ntBASIC0.64□□□□□ -2.31
PDGFRAP16234 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.64□□□□□ -2.31
PDGFRAP16234 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
PDGFRAP16234 Y_RNA.20-201ENST00000362479 113 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 Y_RNA.308-201ENST00000365043 101 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 RNY4P28-201ENST00000365281 93 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 RNU6-728P-201ENST00000365375 104 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 RNU6-1189P-201ENST00000383958 107 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 Y_RNA.410-201ENST00000383992 113 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 SNORD38B-201ENST00000384690 67 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 SNORD58.1-201ENST00000391313 66 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 RNU4-43P-201ENST00000410628 137 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 AL118496.2-201ENST00000448300 230 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 RNU7-96P-201ENST00000459535 64 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 RNU6-998P-201ENST00000515894 101 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 uc_338.6-201ENST00000613544 171 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 SNORD38B-202ENST00000625943 69 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 Z97988.1-201ENST00000637697 135 ntBASIC0.63□□□□□ -2.31
PDGFRAP16234 RNU6-103P-201ENST00000363686 107 ntBASIC0.62□□□□□ -2.31
PDGFRAP16234 Y_RNA.350-201ENST00000365409 98 ntBASIC0.62□□□□□ -2.31
PDGFRAP16234 RNU6-493P-201ENST00000391321 108 ntBASIC0.62□□□□□ -2.31
PDGFRAP16234 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.62□□□□□ -2.31
PDGFRAP16234 MIR548I3-201ENST00000408378 149 ntBASIC0.62□□□□□ -2.31
PDGFRAP16234 SNORD83.1-201ENST00000411362 77 ntBASIC0.62□□□□□ -2.31
PDGFRAP16234 MTND3P2-201ENST00000438452 342 ntBASIC0.62□□□□□ -2.31
PDGFRAP16234 RNU2-11P-201ENST00000459191 187 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms