Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.32□□□□□ -2.62
TNFP01375 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.32□□□□□ -2.62
TNFP01375 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.32□□□□□ -2.62
TNFP01375 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.32□□□□□ -2.62
TNFP01375 MIR548I3-201ENST00000408378 149 ntBASIC-1.32□□□□□ -2.62
TNFP01375 MIR1278-201ENST00000408753 81 ntBASIC-1.32□□□□□ -2.62
TNFP01375 AC022028.1-201ENST00000412054 408 ntBASIC-1.32□□□□□ -2.62
TNFP01375 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.32□□□□□ -2.62
TNFP01375 MIR2113-201ENST00000459007 91 ntBASIC-1.32□□□□□ -2.62
TNFP01375 RNU7-180P-201ENST00000459240 63 ntBASIC-1.32□□□□□ -2.62
TNFP01375 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.32□□□□□ -2.62
TNFP01375 RNU7-13P-201ENST00000516413 62 ntBASIC-1.32□□□□□ -2.62
TNFP01375 SNORD36C-201ENST00000516733 66 ntBASIC-1.32□□□□□ -2.62
TNFP01375 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.32□□□□□ -2.62
TNFP01375 AC022878.1-201ENST00000530684 149 ntBASIC-1.32□□□□□ -2.62
TNFP01375 AC092807.2-201ENST00000609367 243 ntBASIC-1.32□□□□□ -2.62
TNFP01375 HULC.1-201ENST00000612720 240 ntBASIC-1.32□□□□□ -2.62
TNFP01375 MIR3674-201ENST00000636576 68 ntBASIC-1.32□□□□□ -2.62
TNFP01375 FGF7P2-201ENST00000332473 296 ntBASIC-1.33□□□□□ -2.62
TNFP01375 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.33□□□□□ -2.62
TNFP01375 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.33□□□□□ -2.62
TNFP01375 RNU4-58P-201ENST00000363192 141 ntBASIC-1.33□□□□□ -2.62
TNFP01375 RNU6-774P-201ENST00000363238 107 ntBASIC-1.33□□□□□ -2.62
TNFP01375 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.33□□□□□ -2.62
TNFP01375 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.33□□□□□ -2.62
TNFP01375 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.33□□□□□ -2.62
TNFP01375 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.33□□□□□ -2.62
TNFP01375 SNORA69-201ENST00000383895 132 ntBASIC-1.33□□□□□ -2.62
TNFP01375 SNORA26.4-201ENST00000391188 123 ntBASIC-1.33□□□□□ -2.62
TNFP01375 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.33□□□□□ -2.62
TNFP01375 RNU7-195P-201ENST00000458793 62 ntBASIC-1.33□□□□□ -2.62
TNFP01375 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.33□□□□□ -2.62
TNFP01375 RNU7-53P-201ENST00000516705 60 ntBASIC-1.33□□□□□ -2.62
TNFP01375 AC124312.5-201ENST00000604451 268 ntBASIC-1.33□□□□□ -2.62
TNFP01375 AC087752.4-201ENST00000605911 462 ntBASIC-1.33□□□□□ -2.62
TNFP01375 AC006566.1-201ENST00000608943 513 ntBASIC-1.33□□□□□ -2.62
TNFP01375 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.33□□□□□ -2.62
TNFP01375 MIR6841-201ENST00000637129 72 ntBASIC-1.33□□□□□ -2.62
TNFP01375 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.34□□□□□ -2.62
TNFP01375 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.34□□□□□ -2.62
TNFP01375 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.34□□□□□ -2.62
TNFP01375 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.34□□□□□ -2.62
TNFP01375 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.34□□□□□ -2.62
TNFP01375 MIR548A2-201ENST00000384956 97 ntBASIC-1.34□□□□□ -2.62
TNFP01375 RNU4-61P-201ENST00000411243 107 ntBASIC-1.34□□□□□ -2.62
TNFP01375 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-1.34□□□□□ -2.62
TNFP01375 AC090616.4-201ENST00000448026 115 ntBASIC-1.34□□□□□ -2.62
TNFP01375 AC097635.1-201ENST00000450678 155 ntBASIC-1.34□□□□□ -2.62
TNFP01375 RNU7-106P-201ENST00000459514 67 ntBASIC-1.34□□□□□ -2.62
TNFP01375 MTND3P7-201ENST00000474435 343 ntBASIC-1.34□□□□□ -2.62
TNFP01375 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.34□□□□□ -2.62
TNFP01375 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.34□□□□□ -2.62
TNFP01375 RNU6-653P-201ENST00000363074 106 ntBASIC-1.35□□□□□ -2.63
TNFP01375 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.35□□□□□ -2.63
TNFP01375 RNU6-524P-201ENST00000384270 107 ntBASIC-1.35□□□□□ -2.63
TNFP01375 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.35□□□□□ -2.63
TNFP01375 RNU2-61P-201ENST00000411069 191 ntBASIC-1.35□□□□□ -2.63
TNFP01375 BX295541.1-201ENST00000417774 250 ntBASIC-1.35□□□□□ -2.63
TNFP01375 MTCO2P21-201ENST00000419780 677 ntBASIC-1.35□□□□□ -2.63
TNFP01375 FGF7P6-202ENST00000451282 293 ntBASIC-1.35□□□□□ -2.63
TNFP01375 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.35□□□□□ -2.63
TNFP01375 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.35□□□□□ -2.63
TNFP01375 RNU6-168P-201ENST00000516189 101 ntBASIC-1.35□□□□□ -2.63
TNFP01375 AL121655.1-201ENST00000605811 308 ntBASIC-1.35□□□□□ -2.63
TNFP01375 AC103705.1-201ENST00000619013 241 ntBASIC-1.35□□□□□ -2.63
TNFP01375 AL607023.1-201ENST00000620045 248 ntBASIC-1.35□□□□□ -2.63
TNFP01375 RNA5SP405-201ENST00000363059 114 ntBASIC-1.36□□□□□ -2.63
TNFP01375 RNU4-80P-201ENST00000363200 141 ntBASIC-1.36□□□□□ -2.63
TNFP01375 RNU6-157P-201ENST00000383957 107 ntBASIC-1.36□□□□□ -2.63
TNFP01375 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.36□□□□□ -2.63
TNFP01375 SNORA27-201ENST00000384323 126 ntBASIC-1.36□□□□□ -2.63
TNFP01375 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.36□□□□□ -2.63
TNFP01375 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.36□□□□□ -2.63
TNFP01375 SNORD19-201ENST00000391191 68 ntBASIC-1.36□□□□□ -2.63
TNFP01375 AL078595.1-201ENST00000404458 226 ntBASIC-1.36□□□□□ -2.63
TNFP01375 MTND3P23-201ENST00000431980 347 ntBASIC-1.36□□□□□ -2.63
TNFP01375 SNORD42B-201ENST00000458893 67 ntBASIC-1.36□□□□□ -2.63
TNFP01375 MTCO2P30-201ENST00000503662 364 ntBASIC-1.36□□□□□ -2.63
TNFP01375 RNU6-287P-201ENST00000516230 98 ntBASIC-1.36□□□□□ -2.63
TNFP01375 AC144568.1-201ENST00000520139 137 ntBASIC-1.36□□□□□ -2.63
TNFP01375 MIR5692C1-201ENST00000585309 91 ntBASIC-1.36□□□□□ -2.63
TNFP01375 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.36□□□□□ -2.63
TNFP01375 Z84480.1-201ENST00000605131 311 ntBASIC-1.36□□□□□ -2.63
TNFP01375 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.36□□□□□ -2.63
TNFP01375 RNU6-208P-201ENST00000362431 107 ntBASIC-1.37□□□□□ -2.63
TNFP01375 RNU6-79P-201ENST00000362511 107 ntBASIC-1.37□□□□□ -2.63
TNFP01375 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.37□□□□□ -2.63
TNFP01375 SNORD115-33-201ENST00000363723 82 ntBASIC-1.37□□□□□ -2.63
TNFP01375 RNU4-50P-201ENST00000364361 141 ntBASIC-1.37□□□□□ -2.63
TNFP01375 RNU6-83P-201ENST00000384568 112 ntBASIC-1.37□□□□□ -2.63
TNFP01375 MIR519A1-201ENST00000385257 85 ntBASIC-1.37□□□□□ -2.63
TNFP01375 SNORA40.5-201ENST00000391061 128 ntBASIC-1.37□□□□□ -2.63
TNFP01375 RNU6-195P-201ENST00000411352 109 ntBASIC-1.37□□□□□ -2.63
TNFP01375 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.37□□□□□ -2.63
TNFP01375 CHEK2P4-201ENST00000450340 246 ntBASIC-1.37□□□□□ -2.63
TNFP01375 RNU6-276P-201ENST00000516114 96 ntBASIC-1.37□□□□□ -2.63
TNFP01375 RNA5SP93-201ENST00000362525 114 ntBASIC-1.38□□□□□ -2.63
TNFP01375 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.38□□□□□ -2.63
TNFP01375 RNU6-501P-201ENST00000364072 100 ntBASIC-1.38□□□□□ -2.63
TNFP01375 RNU5E-5P-201ENST00000365379 116 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms