Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 RNU6-180P-201ENST00000516697 61 ntBASIC-0.57□□□□□ -2.5
SNX4O95219 RNU6-365P-201ENST00000517113 106 ntBASIC-0.57□□□□□ -2.5
SNX4O95219 MIR4802-201ENST00000581881 80 ntBASIC-0.57□□□□□ -2.5
SNX4O95219 AP001180.6-201ENST00000584918 159 ntBASIC-0.57□□□□□ -2.5
SNX4O95219 RNU6-845P-201ENST00000362578 103 ntBASIC-0.58□□□□□ -2.5
SNX4O95219 SNORD61-201ENST00000384252 73 ntBASIC-0.58□□□□□ -2.5
SNX4O95219 RNU6-937P-201ENST00000384325 106 ntBASIC-0.58□□□□□ -2.5
SNX4O95219 SNORA72.6-201ENST00000384520 129 ntBASIC-0.58□□□□□ -2.5
SNX4O95219 MIR559-201ENST00000385188 96 ntBASIC-0.58□□□□□ -2.5
SNX4O95219 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.58□□□□□ -2.5
SNX4O95219 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.58□□□□□ -2.5
SNX4O95219 RNU6-191P-201ENST00000516295 94 ntBASIC-0.58□□□□□ -2.5
SNX4O95219 MIR4491-201ENST00000581087 68 ntBASIC-0.58□□□□□ -2.5
SNX4O95219 U7.6-201ENST00000610841 64 ntBASIC-0.58□□□□□ -2.5
SNX4O95219 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.58□□□□□ -2.5
SNX4O95219 MIR4272-201ENST00000635924 64 ntBASIC-0.58□□□□□ -2.5
SNX4O95219 SNORD14C-201ENST00000365382 88 ntBASIC-0.59□□□□□ -2.5
SNX4O95219 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.59□□□□□ -2.5
SNX4O95219 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.59□□□□□ -2.5
SNX4O95219 MIR548A2-201ENST00000384956 97 ntBASIC-0.59□□□□□ -2.5
SNX4O95219 MIR501-201ENST00000390204 84 ntBASIC-0.59□□□□□ -2.5
SNX4O95219 RNA5SP300-201ENST00000391197 107 ntBASIC-0.59□□□□□ -2.5
SNX4O95219 SNORD126-201ENST00000459475 77 ntBASIC-0.59□□□□□ -2.5
SNX4O95219 RNU6-699P-201ENST00000517081 110 ntBASIC-0.59□□□□□ -2.5
SNX4O95219 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.59□□□□□ -2.5
SNX4O95219 AP003072.1-201ENST00000531740 145 ntBASIC-0.59□□□□□ -2.5
SNX4O95219 MIR4724-201ENST00000579485 89 ntBASIC-0.59□□□□□ -2.5
SNX4O95219 RNU6-46P-201ENST00000383860 107 ntBASIC-0.6□□□□□ -2.51
SNX4O95219 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.6□□□□□ -2.51
SNX4O95219 MIR196A2-201ENST00000385189 110 ntBASIC-0.6□□□□□ -2.51
SNX4O95219 SNORA26.6-201ENST00000391256 115 ntBASIC-0.6□□□□□ -2.51
SNX4O95219 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.6□□□□□ -2.51
SNX4O95219 MIR548F1-201ENST00000408667 84 ntBASIC-0.6□□□□□ -2.51
SNX4O95219 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.6□□□□□ -2.51
SNX4O95219 U8.20-201ENST00000459445 131 ntBASIC-0.6□□□□□ -2.51
SNX4O95219 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.6□□□□□ -2.51
SNX4O95219 AP003733.2-201ENST00000529409 171 ntBASIC-0.6□□□□□ -2.51
SNX4O95219 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.61□□□□□ -2.51
SNX4O95219 RNU6-763P-201ENST00000390865 106 ntBASIC-0.61□□□□□ -2.51
SNX4O95219 HMGN2P22-201ENST00000427588 175 ntBASIC-0.61□□□□□ -2.51
SNX4O95219 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.61□□□□□ -2.51
SNX4O95219 SNORD116.3-201ENST00000517176 78 ntBASIC-0.61□□□□□ -2.51
SNX4O95219 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.61□□□□□ -2.51
SNX4O95219 MIR4636-201ENST00000582271 80 ntBASIC-0.61□□□□□ -2.51
SNX4O95219 AC080013.6-201ENST00000606185 215 ntBASIC-0.61□□□□□ -2.51
SNX4O95219 AL133255.1-201ENST00000606374 441 ntBASIC-0.61□□□□□ -2.51
SNX4O95219 MIR3666-201ENST00000607845 111 ntBASIC-0.61□□□□□ -2.51
SNX4O95219 AC013791.1-201ENST00000616619 62 ntBASIC-0.61□□□□□ -2.51
SNX4O95219 MIR342-201ENST00000362212 99 ntBASIC-0.62□□□□□ -2.51
SNX4O95219 RNA5SP98-201ENST00000363158 137 ntBASIC-0.62□□□□□ -2.51
SNX4O95219 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.62□□□□□ -2.51
SNX4O95219 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.62□□□□□ -2.51
SNX4O95219 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.62□□□□□ -2.51
SNX4O95219 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.62□□□□□ -2.51
SNX4O95219 RNU6-475P-201ENST00000516073 104 ntBASIC-0.62□□□□□ -2.51
SNX4O95219 AC141846.1-201ENST00000568348 142 ntBASIC-0.62□□□□□ -2.51
SNX4O95219 MTND5P34-201ENST00000568888 325 ntBASIC-0.62□□□□□ -2.51
SNX4O95219 MIR5706-201ENST00000579841 80 ntBASIC-0.62□□□□□ -2.51
SNX4O95219 MIR8064-201ENST00000612863 90 ntBASIC-0.62□□□□□ -2.51
SNX4O95219 AL596211.1-201ENST00000569873 2277 ntBASIC-0.63□□□□□ -2.51
SNX4O95219 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.63□□□□□ -2.51
SNX4O95219 RNU6-1215P-201ENST00000384441 102 ntBASIC-0.63□□□□□ -2.51
SNX4O95219 MTND1P34-201ENST00000438556 671 ntBASIC-0.63□□□□□ -2.51
SNX4O95219 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.63□□□□□ -2.51
SNX4O95219 MIR4493-201ENST00000584016 73 ntBASIC-0.63□□□□□ -2.51
SNX4O95219 MIR548AD-201ENST00000584780 82 ntBASIC-0.63□□□□□ -2.51
SNX4O95219 AC010655.3-201ENST00000478818 450 ntBASIC-0.64□□□□□ -2.51
SNX4O95219 AC069439.1-201ENST00000494739 167 ntBASIC-0.64□□□□□ -2.51
SNX4O95219 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.64□□□□□ -2.51
SNX4O95219 RNU6-559P-201ENST00000516151 98 ntBASIC-0.64□□□□□ -2.51
SNX4O95219 RNU2-60P-201ENST00000517290 128 ntBASIC-0.64□□□□□ -2.51
SNX4O95219 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.65□□□□□ -2.51
SNX4O95219 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.65□□□□□ -2.51
SNX4O95219 RNU6-949P-201ENST00000384040 107 ntBASIC-0.65□□□□□ -2.51
SNX4O95219 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.65□□□□□ -2.51
SNX4O95219 AF228730.3-201ENST00000436691 102 ntBASIC-0.65□□□□□ -2.51
SNX4O95219 MTCO2P24-201ENST00000515611 426 ntBASIC-0.65□□□□□ -2.51
SNX4O95219 RNU6-764P-201ENST00000516396 105 ntBASIC-0.65□□□□□ -2.51
SNX4O95219 SNORA40.14-201ENST00000516543 86 ntBASIC-0.65□□□□□ -2.51
SNX4O95219 RNA5SP395-201ENST00000516567 118 ntBASIC-0.65□□□□□ -2.51
SNX4O95219 RNU6-897P-201ENST00000517135 105 ntBASIC-0.65□□□□□ -2.51
SNX4O95219 MIR3925-201ENST00000584674 77 ntBASIC-0.65□□□□□ -2.51
SNX4O95219 AC113139.1-201ENST00000605049 239 ntBASIC-0.65□□□□□ -2.51
SNX4O95219 MIR101-1-201ENST00000362265 75 ntBASIC-0.66□□□□□ -2.52
SNX4O95219 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.66□□□□□ -2.52
SNX4O95219 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.66□□□□□ -2.52
SNX4O95219 RNU6-35P-201ENST00000384530 107 ntBASIC-0.66□□□□□ -2.52
SNX4O95219 MIR5692C2-201ENST00000577959 77 ntBASIC-0.66□□□□□ -2.52
SNX4O95219 C8orf59P2-201ENST00000603441 271 ntBASIC-0.66□□□□□ -2.52
SNX4O95219 MIR548AZ-201ENST00000616567 95 ntBASIC-0.66□□□□□ -2.52
SNX4O95219 FTX_2.1-201ENST00000618816 94 ntBASIC-0.66□□□□□ -2.52
SNX4O95219 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.67□□□□□ -2.52
SNX4O95219 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.67□□□□□ -2.52
SNX4O95219 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.67□□□□□ -2.52
SNX4O95219 RNU7-80P-201ENST00000459562 61 ntBASIC-0.67□□□□□ -2.52
SNX4O95219 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.67□□□□□ -2.52
SNX4O95219 MIR5688-201ENST00000580619 83 ntBASIC-0.67□□□□□ -2.52
SNX4O95219 AL442067.1-201ENST00000613261 223 ntBASIC-0.67□□□□□ -2.52
SNX4O95219 uc_338.36-201ENST00000622331 158 ntBASIC-0.67□□□□□ -2.52
SNX4O95219 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 223.5 ms