Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RNY1P10-201ENST00000363268 113 ntBASIC1.36□□□□□ -2.19
LDB2O43679 Y_RNA.327-201ENST00000365201 102 ntBASIC1.36□□□□□ -2.19
LDB2O43679 SNORD18B-201ENST00000365659 72 ntBASIC1.36□□□□□ -2.19
LDB2O43679 SNORA24-201ENST00000384096 131 ntBASIC1.36□□□□□ -2.19
LDB2O43679 Y_RNA.454-201ENST00000384224 113 ntBASIC1.36□□□□□ -2.19
LDB2O43679 AL392103.1-201ENST00000447000 198 ntBASIC1.36□□□□□ -2.19
LDB2O43679 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.36□□□□□ -2.19
LDB2O43679 RNU6-998P-201ENST00000515894 101 ntBASIC1.36□□□□□ -2.19
LDB2O43679 MIR4791-201ENST00000607666 84 ntBASIC1.36□□□□□ -2.19
LDB2O43679 AC010332.2-201ENST00000613083 1904 ntBASIC1.36□□□□□ -2.19
LDB2O43679 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
LDB2O43679 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
LDB2O43679 RNU6-704P-201ENST00000364162 103 ntBASIC1.35□□□□□ -2.19
LDB2O43679 Y_RNA.351-201ENST00000365436 96 ntBASIC1.35□□□□□ -2.19
LDB2O43679 SNORA51.10-201ENST00000384418 136 ntBASIC1.35□□□□□ -2.19
LDB2O43679 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.35□□□□□ -2.19
LDB2O43679 RPS29P29-201ENST00000456396 171 ntBASIC1.35□□□□□ -2.19
LDB2O43679 RNA5SP236-201ENST00000516169 116 ntBASIC1.35□□□□□ -2.19
LDB2O43679 RNU2-60P-201ENST00000517290 128 ntBASIC1.35□□□□□ -2.19
LDB2O43679 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.35□□□□□ -2.19
LDB2O43679 AC243994.1-201ENST00000618627 109 ntBASIC1.35□□□□□ -2.19
LDB2O43679 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.34□□□□□ -2.19
LDB2O43679 RNU6-915P-201ENST00000364943 103 ntBASIC1.34□□□□□ -2.19
LDB2O43679 MIR570-201ENST00000384917 97 ntBASIC1.34□□□□□ -2.19
LDB2O43679 MIR758-201ENST00000390227 88 ntBASIC1.34□□□□□ -2.19
LDB2O43679 AL603914.1-201ENST00000401964 204 ntBASIC1.34□□□□□ -2.19
LDB2O43679 RPS27P16-201ENST00000425758 201 ntBASIC1.34□□□□□ -2.19
LDB2O43679 AL035398.1-201ENST00000430869 322 ntBASIC1.34□□□□□ -2.19
LDB2O43679 RPL39P39-201ENST00000455840 151 ntBASIC1.34□□□□□ -2.19
LDB2O43679 RNU7-53P-201ENST00000516705 60 ntBASIC1.34□□□□□ -2.19
LDB2O43679 RNU7-70P-201ENST00000516941 66 ntBASIC1.34□□□□□ -2.19
LDB2O43679 RNU6-902P-201ENST00000517212 91 ntBASIC1.34□□□□□ -2.19
LDB2O43679 AP001328.1-201ENST00000528550 176 ntBASIC1.34□□□□□ -2.19
LDB2O43679 AL512310.8-201ENST00000550183 120 ntBASIC1.34□□□□□ -2.19
LDB2O43679 AC068338.1-201ENST00000565567 176 ntBASIC1.34□□□□□ -2.19
LDB2O43679 MIR3664-201ENST00000579074 99 ntBASIC1.34□□□□□ -2.19
LDB2O43679 AP001485.1-201ENST00000604799 199 ntBASIC1.34□□□□□ -2.19
LDB2O43679 RNA5SP48-201ENST00000363969 126 ntBASIC1.33□□□□□ -2.2
LDB2O43679 RNU1-133P-201ENST00000364867 167 ntBASIC1.33□□□□□ -2.2
LDB2O43679 SNORA20-201ENST00000384662 132 ntBASIC1.33□□□□□ -2.2
LDB2O43679 SNORA40-201ENST00000388090 126 ntBASIC1.33□□□□□ -2.2
LDB2O43679 RNU1-123P-201ENST00000458950 160 ntBASIC1.33□□□□□ -2.2
LDB2O43679 RNU7-67P-201ENST00000459003 62 ntBASIC1.33□□□□□ -2.2
LDB2O43679 RNU7-41P-201ENST00000515917 61 ntBASIC1.33□□□□□ -2.2
LDB2O43679 RNA5SP272-201ENST00000516095 111 ntBASIC1.33□□□□□ -2.2
LDB2O43679 Y_RNA.686-201ENST00000516548 134 ntBASIC1.33□□□□□ -2.2
LDB2O43679 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.33□□□□□ -2.2
LDB2O43679 AL096861.1-201ENST00000610899 123 ntBASIC1.33□□□□□ -2.2
LDB2O43679 AC091932.4-201ENST00000623386 200 ntBASIC1.33□□□□□ -2.2
LDB2O43679 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
LDB2O43679 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.32□□□□□ -2.2
LDB2O43679 RNU7-73P-201ENST00000458743 63 ntBASIC1.32□□□□□ -2.2
LDB2O43679 Y_RNA.690-201ENST00000516603 95 ntBASIC1.32□□□□□ -2.2
LDB2O43679 RNU6-958P-201ENST00000516995 106 ntBASIC1.32□□□□□ -2.2
LDB2O43679 AL161722.3-201ENST00000605789 2983 ntBASIC1.32□□□□□ -2.2
LDB2O43679 U7.2-201ENST00000607576 63 ntBASIC1.32□□□□□ -2.2
LDB2O43679 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.32□□□□□ -2.2
LDB2O43679 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
LDB2O43679 AL353770.2-201ENST00000620024 78 ntBASIC1.32□□□□□ -2.2
LDB2O43679 AL121890.5-201ENST00000620848 304 ntBASIC1.32□□□□□ -2.2
LDB2O43679 MIR4251-201ENST00000635819 61 ntBASIC1.32□□□□□ -2.2
LDB2O43679 MIR302B-201ENST00000362188 73 ntBASIC1.31□□□□□ -2.2
LDB2O43679 MIR342-201ENST00000362212 99 ntBASIC1.31□□□□□ -2.2
LDB2O43679 Y_RNA.226-201ENST00000364337 114 ntBASIC1.31□□□□□ -2.2
LDB2O43679 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
LDB2O43679 RNU6-257P-201ENST00000410238 98 ntBASIC1.31□□□□□ -2.2
LDB2O43679 MTND4LP9-201ENST00000427694 174 ntBASIC1.31□□□□□ -2.2
LDB2O43679 TMSB4XP3-201ENST00000445144 114 ntBASIC1.31□□□□□ -2.2
LDB2O43679 RNU2-11P-201ENST00000459191 187 ntBASIC1.31□□□□□ -2.2
LDB2O43679 AC004223.1-201ENST00000479840 271 ntBASIC1.31□□□□□ -2.2
LDB2O43679 RNU6-947P-201ENST00000516264 106 ntBASIC1.31□□□□□ -2.2
LDB2O43679 Y_RNA.692-201ENST00000516627 105 ntBASIC1.31□□□□□ -2.2
LDB2O43679 RNU6-165P-201ENST00000517170 99 ntBASIC1.31□□□□□ -2.2
LDB2O43679 MIR3192-201ENST00000584920 77 ntBASIC1.31□□□□□ -2.2
LDB2O43679 MIR8070-201ENST00000616510 88 ntBASIC1.31□□□□□ -2.2
LDB2O43679 TUG1_4.1-201ENST00000619464 181 ntBASIC1.31□□□□□ -2.2
LDB2O43679 AC091895.1-201ENST00000624494 256 ntBASIC1.31□□□□□ -2.2
LDB2O43679 AL596211.1-201ENST00000569873 2277 ntBASIC1.3□□□□□ -2.2
LDB2O43679 Y_RNA.586-201ENST00000391146 98 ntBASIC1.3□□□□□ -2.2
LDB2O43679 RPS29P23-201ENST00000458635 123 ntBASIC1.3□□□□□ -2.2
LDB2O43679 snoU13.16-201ENST00000459350 104 ntBASIC1.3□□□□□ -2.2
LDB2O43679 RNU6-113P-201ENST00000516653 101 ntBASIC1.3□□□□□ -2.2
LDB2O43679 Y_RNA.757-201ENST00000578934 114 ntBASIC1.3□□□□□ -2.2
LDB2O43679 MIR3660-201ENST00000584845 100 ntBASIC1.3□□□□□ -2.2
LDB2O43679 AC011603.4-201ENST00000611325 277 ntBASIC1.3□□□□□ -2.2
LDB2O43679 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.29□□□□□ -2.2
LDB2O43679 MIR1287-201ENST00000408492 90 ntBASIC1.29□□□□□ -2.2
LDB2O43679 Y_RNA.651-201ENST00000459380 103 ntBASIC1.29□□□□□ -2.2
LDB2O43679 AL022345.2-201ENST00000606307 135 ntBASIC1.29□□□□□ -2.2
LDB2O43679 RNU6-309P-201ENST00000364573 106 ntBASIC1.28□□□□□ -2.2
LDB2O43679 SNORA25.9-201ENST00000365087 128 ntBASIC1.28□□□□□ -2.2
LDB2O43679 RNY1P6-201ENST00000384193 109 ntBASIC1.28□□□□□ -2.2
LDB2O43679 RNU6-913P-201ENST00000390913 95 ntBASIC1.28□□□□□ -2.2
LDB2O43679 SNORA40.6-201ENST00000391153 128 ntBASIC1.28□□□□□ -2.2
LDB2O43679 RNU4-61P-201ENST00000411243 107 ntBASIC1.28□□□□□ -2.2
LDB2O43679 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.28□□□□□ -2.2
LDB2O43679 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.28□□□□□ -2.2
LDB2O43679 AL133373.1-201ENST00000497098 94 ntBASIC1.28□□□□□ -2.2
LDB2O43679 RN7SKP88-201ENST00000516847 250 ntBASIC1.28□□□□□ -2.2
LDB2O43679 MIR3121-201ENST00000579680 77 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms