Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 MIR520C-201ENST00000385005 87 ntBASIC1.43□□□□□ -2.18
MSI1O43347 SNORA40.5-201ENST00000391061 128 ntBASIC1.43□□□□□ -2.18
MSI1O43347 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.43□□□□□ -2.18
MSI1O43347 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.43□□□□□ -2.18
MSI1O43347 snoU13.25-201ENST00000458945 104 ntBASIC1.43□□□□□ -2.18
MSI1O43347 RNU7-41P-201ENST00000515917 61 ntBASIC1.43□□□□□ -2.18
MSI1O43347 RNA5SP102-201ENST00000516865 106 ntBASIC1.43□□□□□ -2.18
MSI1O43347 RNU6-902P-201ENST00000517212 91 ntBASIC1.43□□□□□ -2.18
MSI1O43347 MIR4285-201ENST00000581001 85 ntBASIC1.43□□□□□ -2.18
MSI1O43347 MIR3192-201ENST00000584920 77 ntBASIC1.43□□□□□ -2.18
MSI1O43347 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.43□□□□□ -2.18
MSI1O43347 RNU6-774P-201ENST00000363238 107 ntBASIC1.42□□□□□ -2.18
MSI1O43347 SNORA7.1-201ENST00000363750 139 ntBASIC1.42□□□□□ -2.18
MSI1O43347 SNORA1.2-201ENST00000365189 134 ntBASIC1.42□□□□□ -2.18
MSI1O43347 SNORA27-201ENST00000384323 126 ntBASIC1.42□□□□□ -2.18
MSI1O43347 RNU6-342P-201ENST00000384521 104 ntBASIC1.42□□□□□ -2.18
MSI1O43347 RNU6-1149P-201ENST00000516810 97 ntBASIC1.42□□□□□ -2.18
MSI1O43347 RNU2-60P-201ENST00000517290 128 ntBASIC1.42□□□□□ -2.18
MSI1O43347 AC131055.1-201ENST00000584626 316 ntBASIC1.42□□□□□ -2.18
MSI1O43347 AL357312.1-201ENST00000603879 298 ntBASIC1.42□□□□□ -2.18
MSI1O43347 MIR6515-201ENST00000619843 57 ntBASIC1.42□□□□□ -2.18
MSI1O43347 AC008133.2-201ENST00000624540 351 ntBASIC1.42□□□□□ -2.18
MSI1O43347 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
MSI1O43347 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
MSI1O43347 MTND5P32-201ENST00000560711 1802 ntBASIC1.41□□□□□ -2.18
MSI1O43347 SNORA24-201ENST00000384096 131 ntBASIC1.41□□□□□ -2.18
MSI1O43347 MIR569-201ENST00000385228 96 ntBASIC1.41□□□□□ -2.18
MSI1O43347 SUMO1P3-201ENST00000439961 304 ntBASIC1.41□□□□□ -2.18
MSI1O43347 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
MSI1O43347 RPL30P7-201ENST00000479312 323 ntBASIC1.41□□□□□ -2.18
MSI1O43347 SNORA25.12-201ENST00000516202 82 ntBASIC1.41□□□□□ -2.18
MSI1O43347 MIR548X2-201ENST00000579776 100 ntBASIC1.41□□□□□ -2.18
MSI1O43347 MIR4791-201ENST00000607666 84 ntBASIC1.41□□□□□ -2.18
MSI1O43347 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
MSI1O43347 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
MSI1O43347 AC004223.1-201ENST00000479840 271 ntBASIC1.4□□□□□ -2.19
MSI1O43347 RNA5SP236-201ENST00000516169 116 ntBASIC1.4□□□□□ -2.19
MSI1O43347 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.4□□□□□ -2.19
MSI1O43347 MIR3133-201ENST00000583157 78 ntBASIC1.4□□□□□ -2.19
MSI1O43347 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
MSI1O43347 AC022709.1-201ENST00000615967 87 ntBASIC1.4□□□□□ -2.19
MSI1O43347 AC243994.1-201ENST00000618627 109 ntBASIC1.4□□□□□ -2.19
MSI1O43347 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
MSI1O43347 Y_RNA.374-201ENST00000365606 101 ntBASIC1.39□□□□□ -2.19
MSI1O43347 RNU6-746P-201ENST00000384112 109 ntBASIC1.39□□□□□ -2.19
MSI1O43347 Y_RNA.488-201ENST00000384403 102 ntBASIC1.39□□□□□ -2.19
MSI1O43347 Y_RNA.537-201ENST00000384626 109 ntBASIC1.39□□□□□ -2.19
MSI1O43347 RNU6-460P-201ENST00000391158 108 ntBASIC1.39□□□□□ -2.19
MSI1O43347 RPS29P29-201ENST00000456396 171 ntBASIC1.39□□□□□ -2.19
MSI1O43347 RPS29P24-201ENST00000486345 171 ntBASIC1.39□□□□□ -2.19
MSI1O43347 RNU6-998P-201ENST00000515894 101 ntBASIC1.39□□□□□ -2.19
MSI1O43347 SNORA31.4-201ENST00000516049 129 ntBASIC1.39□□□□□ -2.19
MSI1O43347 RNA5SP272-201ENST00000516095 111 ntBASIC1.39□□□□□ -2.19
MSI1O43347 RNU6-947P-201ENST00000516264 106 ntBASIC1.39□□□□□ -2.19
MSI1O43347 Y_RNA.703-201ENST00000516846 111 ntBASIC1.39□□□□□ -2.19
MSI1O43347 AL157834.3-201ENST00000615543 103 ntBASIC1.39□□□□□ -2.19
MSI1O43347 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
MSI1O43347 SNORD114-22-201ENST00000365423 72 ntBASIC1.38□□□□□ -2.19
MSI1O43347 SNORA51.10-201ENST00000384418 136 ntBASIC1.38□□□□□ -2.19
MSI1O43347 Y_RNA.584-201ENST00000391090 114 ntBASIC1.38□□□□□ -2.19
MSI1O43347 MIR513C-201ENST00000401352 84 ntBASIC1.38□□□□□ -2.19
MSI1O43347 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.38□□□□□ -2.19
MSI1O43347 RNU7-96P-201ENST00000459535 64 ntBASIC1.38□□□□□ -2.19
MSI1O43347 RNU6-426P-201ENST00000516464 97 ntBASIC1.38□□□□□ -2.19
MSI1O43347 Y_RNA.686-201ENST00000516548 134 ntBASIC1.38□□□□□ -2.19
MSI1O43347 CYP3A52P-201ENST00000563326 91 ntBASIC1.38□□□□□ -2.19
MSI1O43347 AL121890.5-201ENST00000620848 304 ntBASIC1.38□□□□□ -2.19
MSI1O43347 RNU6-508P-201ENST00000363231 103 ntBASIC1.37□□□□□ -2.19
MSI1O43347 Y_RNA.351-201ENST00000365436 96 ntBASIC1.37□□□□□ -2.19
MSI1O43347 RNU6-187P-201ENST00000384139 106 ntBASIC1.37□□□□□ -2.19
MSI1O43347 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.37□□□□□ -2.19
MSI1O43347 RPL39P39-201ENST00000455840 151 ntBASIC1.37□□□□□ -2.19
MSI1O43347 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
MSI1O43347 AC107297.1-201ENST00000459991 176 ntBASIC1.37□□□□□ -2.19
MSI1O43347 MIR4251-201ENST00000635819 61 ntBASIC1.37□□□□□ -2.19
MSI1O43347 SNORA70.7-201ENST00000384159 133 ntBASIC1.36□□□□□ -2.19
MSI1O43347 SNORA20-201ENST00000384662 132 ntBASIC1.36□□□□□ -2.19
MSI1O43347 RNU6-1067P-201ENST00000384752 107 ntBASIC1.36□□□□□ -2.19
MSI1O43347 MIR598-201ENST00000384868 97 ntBASIC1.36□□□□□ -2.19
MSI1O43347 MIR150-201ENST00000385048 84 ntBASIC1.36□□□□□ -2.19
MSI1O43347 RNU6-913P-201ENST00000390913 95 ntBASIC1.36□□□□□ -2.19
MSI1O43347 RNU7-67P-201ENST00000459003 62 ntBASIC1.36□□□□□ -2.19
MSI1O43347 RN7SKP88-201ENST00000516847 250 ntBASIC1.36□□□□□ -2.19
MSI1O43347 RNU6-958P-201ENST00000516995 106 ntBASIC1.36□□□□□ -2.19
MSI1O43347 7SK.8-201ENST00000612110 250 ntBASIC1.36□□□□□ -2.19
MSI1O43347 7SK.11-201ENST00000615477 250 ntBASIC1.36□□□□□ -2.19
MSI1O43347 AL353770.2-201ENST00000620024 78 ntBASIC1.36□□□□□ -2.19
MSI1O43347 7SK.13-201ENST00000622040 250 ntBASIC1.36□□□□□ -2.19
MSI1O43347 AC091932.4-201ENST00000623386 200 ntBASIC1.36□□□□□ -2.19
MSI1O43347 Y_RNA.120-201ENST00000363304 110 ntBASIC1.35□□□□□ -2.19
MSI1O43347 RNA5SP48-201ENST00000363969 126 ntBASIC1.35□□□□□ -2.19
MSI1O43347 Y_RNA.420-201ENST00000384043 110 ntBASIC1.35□□□□□ -2.19
MSI1O43347 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
MSI1O43347 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.35□□□□□ -2.19
MSI1O43347 AL035398.1-201ENST00000430869 322 ntBASIC1.35□□□□□ -2.19
MSI1O43347 AP003716.2-201ENST00000528260 108 ntBASIC1.35□□□□□ -2.19
MSI1O43347 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
MSI1O43347 MIR548AO-201ENST00000579992 96 ntBASIC1.35□□□□□ -2.19
MSI1O43347 PVT1_3.1-201ENST00000620853 95 ntBASIC1.35□□□□□ -2.19
MSI1O43347 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms