Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 RNU5F-1-201ENST00000362507 117 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 RNU6-805P-201ENST00000365643 106 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 MIR516A2-201ENST00000384888 90 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 MIR516A1-201ENST00000385033 90 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 RNA5SP100-201ENST00000410903 110 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 RNA5SP59-201ENST00000410922 110 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 AC015818.7-201ENST00000428754 109 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 AL161722.3-201ENST00000605789 2983 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 RNU6-208P-201ENST00000362431 107 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 RNU6-132P-201ENST00000383863 107 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 RNU6-649P-201ENST00000384463 107 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 MIR520H-201ENST00000385126 88 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 MIR634-201ENST00000385208 97 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 RNU6-466P-201ENST00000391224 103 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 RNU6-75P-201ENST00000515944 104 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 RNU6-303P-201ENST00000517091 106 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 AL137849.1-201ENST00000604767 169 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 MIR7851-201ENST00000610611 160 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 SNORA48.8-201ENST00000391324 134 ntBASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 MIR1265-201ENST00000408444 86 ntBASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 SNORD111.1-201ENST00000516421 86 ntBASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
SPDYE4A6NLX3 SNORA11.2-201ENST00000408318 127 ntBASIC3.9□□□□□ -1.79
SPDYE4A6NLX3 RNU2-59P-201ENST00000410482 191 ntBASIC3.9□□□□□ -1.79
SPDYE4A6NLX3 AC245517.4-201ENST00000448601 281 ntBASIC3.9□□□□□ -1.79
SPDYE4A6NLX3 AC003982.1-202ENST00000469928 248 ntBASIC3.9□□□□□ -1.79
SPDYE4A6NLX3 AC067747.1-201ENST00000608026 250 ntBASIC3.9□□□□□ -1.79
SPDYE4A6NLX3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 RNU6-203P-201ENST00000384038 104 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 RNA5SP424-201ENST00000390988 115 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 RNU6-587P-201ENST00000391282 106 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 UBBP3-201ENST00000445497 241 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 AC092185.1-201ENST00000491371 97 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 SNORA31.17-201ENST00000516953 127 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 AP000553.6-201ENST00000641242 118 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 SNORD9-201ENST00000362566 104 ntBASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 SNORA38.1-201ENST00000364172 131 ntBASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 RNU6-396P-201ENST00000365369 105 ntBASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 MIR490-201ENST00000384865 128 ntBASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 AC004965.1-201ENST00000413033 213 ntBASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 SNORA64.4-201ENST00000516632 81 ntBASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 MIR2276-201ENST00000516886 89 ntBASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 AC006989.1-201ENST00000427212 131 ntBASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 UBL5P2-201ENST00000583788 219 ntBASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 MIR6740-201ENST00000618268 113 ntBASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 MIR30D-201ENST00000362283 70 ntBASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 RNA5SP42-201ENST00000364278 115 ntBASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 AC074348.1-201ENST00000426503 132 ntBASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 AC104027.1-201ENST00000521887 300 ntBASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 MIR3651-201ENST00000630427 90 ntBASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 SNORD56.3-201ENST00000363507 71 ntBASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 RNU6-1165P-201ENST00000410119 107 ntBASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 RNA5SP344-201ENST00000411081 104 ntBASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 SNORA59A-201ENST00000459326 152 ntBASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 MIR4264-201ENST00000583520 66 ntBASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 AC022149.2-201ENST00000621061 203 ntBASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 MIR194-1-201ENST00000384892 85 ntBASIC3.84□□□□□ -1.79
SPDYE4A6NLX3 SNORD30.1-201ENST00000391309 70 ntBASIC3.84□□□□□ -1.79
SPDYE4A6NLX3 Y_RNA.596-201ENST00000410462 109 ntBASIC3.84□□□□□ -1.79
SPDYE4A6NLX3 RNA5SP270-201ENST00000411361 118 ntBASIC3.84□□□□□ -1.79
SPDYE4A6NLX3 HMGN1P18-201ENST00000457642 277 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms