Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 RNU5F-1-201ENST00000362507 117 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 RNU6-805P-201ENST00000365643 106 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 MIR516A2-201ENST00000384888 90 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 MIR516A1-201ENST00000385033 90 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 RNA5SP100-201ENST00000410903 110 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 RNA5SP59-201ENST00000410922 110 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 AC015818.7-201ENST00000428754 109 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 AL161722.3-201ENST00000605789 2983 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.93□□□□□ -1.78
SPDYE4A6NLX3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 RNU6-208P-201ENST00000362431 107 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 RNU6-132P-201ENST00000383863 107 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 RNU6-649P-201ENST00000384463 107 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 MIR520H-201ENST00000385126 88 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 MIR634-201ENST00000385208 97 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 RNU6-466P-201ENST00000391224 103 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 RNU6-75P-201ENST00000515944 104 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 RNU6-303P-201ENST00000517091 106 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 AL137849.1-201ENST00000604767 169 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 MIR7851-201ENST00000610611 160 ntBASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SPDYE4A6NLX3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 SNORA48.8-201ENST00000391324 134 ntBASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 MIR1265-201ENST00000408444 86 ntBASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 SNORD111.1-201ENST00000516421 86 ntBASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.91□□□□□ -1.78
SPDYE4A6NLX3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
SPDYE4A6NLX3 SNORA11.2-201ENST00000408318 127 ntBASIC3.9□□□□□ -1.79
SPDYE4A6NLX3 RNU2-59P-201ENST00000410482 191 ntBASIC3.9□□□□□ -1.79
SPDYE4A6NLX3 AC245517.4-201ENST00000448601 281 ntBASIC3.9□□□□□ -1.79
SPDYE4A6NLX3 AC003982.1-202ENST00000469928 248 ntBASIC3.9□□□□□ -1.79
SPDYE4A6NLX3 AC067747.1-201ENST00000608026 250 ntBASIC3.9□□□□□ -1.79
SPDYE4A6NLX3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 RNU6-203P-201ENST00000384038 104 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 RNA5SP424-201ENST00000390988 115 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 RNU6-587P-201ENST00000391282 106 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 UBBP3-201ENST00000445497 241 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 AC092185.1-201ENST00000491371 97 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 SNORA31.17-201ENST00000516953 127 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 AP000553.6-201ENST00000641242 118 ntBASIC3.89□□□□□ -1.79
SPDYE4A6NLX3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 SNORD9-201ENST00000362566 104 ntBASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 SNORA38.1-201ENST00000364172 131 ntBASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 RNU6-396P-201ENST00000365369 105 ntBASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 MIR490-201ENST00000384865 128 ntBASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 AC004965.1-201ENST00000413033 213 ntBASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 SNORA64.4-201ENST00000516632 81 ntBASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 MIR2276-201ENST00000516886 89 ntBASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SPDYE4A6NLX3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 AC006989.1-201ENST00000427212 131 ntBASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 UBL5P2-201ENST00000583788 219 ntBASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 MIR6740-201ENST00000618268 113 ntBASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SPDYE4A6NLX3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 MIR30D-201ENST00000362283 70 ntBASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 RNA5SP42-201ENST00000364278 115 ntBASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 AC074348.1-201ENST00000426503 132 ntBASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 AC104027.1-201ENST00000521887 300 ntBASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 MIR3651-201ENST00000630427 90 ntBASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SPDYE4A6NLX3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 SNORD56.3-201ENST00000363507 71 ntBASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 RNU6-1165P-201ENST00000410119 107 ntBASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 RNA5SP344-201ENST00000411081 104 ntBASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 SNORA59A-201ENST00000459326 152 ntBASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 MIR4264-201ENST00000583520 66 ntBASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 AC022149.2-201ENST00000621061 203 ntBASIC3.85□□□□□ -1.79
SPDYE4A6NLX3 MIR194-1-201ENST00000384892 85 ntBASIC3.84□□□□□ -1.79
SPDYE4A6NLX3 SNORD30.1-201ENST00000391309 70 ntBASIC3.84□□□□□ -1.79
SPDYE4A6NLX3 Y_RNA.596-201ENST00000410462 109 ntBASIC3.84□□□□□ -1.79
SPDYE4A6NLX3 RNA5SP270-201ENST00000411361 118 ntBASIC3.84□□□□□ -1.79
SPDYE4A6NLX3 HMGN1P18-201ENST00000457642 277 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms