Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 MIR6717-201ENST00000622747 73 ntBASIC1.89□□□□□ -2.11
TRAV20A0A0B4J274 U6.95-201ENST00000636931 70 ntBASIC1.89□□□□□ -2.11
TRAV20A0A0B4J274 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TRAV20A0A0B4J274 SNORA1.1-201ENST00000364671 133 ntBASIC1.88□□□□□ -2.11
TRAV20A0A0B4J274 Y_RNA.298-201ENST00000364960 107 ntBASIC1.88□□□□□ -2.11
TRAV20A0A0B4J274 Y_RNA.346-201ENST00000365385 112 ntBASIC1.88□□□□□ -2.11
TRAV20A0A0B4J274 Y_RNA.528-201ENST00000384575 108 ntBASIC1.88□□□□□ -2.11
TRAV20A0A0B4J274 SNORA26.6-201ENST00000391256 115 ntBASIC1.88□□□□□ -2.11
TRAV20A0A0B4J274 AL022718.1-201ENST00000412004 84 ntBASIC1.88□□□□□ -2.11
TRAV20A0A0B4J274 HMGN1P33-201ENST00000432945 451 ntBASIC1.88□□□□□ -2.11
TRAV20A0A0B4J274 AC009474.2-201ENST00000451383 136 ntBASIC1.88□□□□□ -2.11
TRAV20A0A0B4J274 RNU6-1290P-201ENST00000362957 109 ntBASIC1.87□□□□□ -2.11
TRAV20A0A0B4J274 MIR934-201ENST00000401241 83 ntBASIC1.87□□□□□ -2.11
TRAV20A0A0B4J274 RNU6-893P-201ENST00000458841 100 ntBASIC1.87□□□□□ -2.11
TRAV20A0A0B4J274 RNU7-123P-201ENST00000515911 60 ntBASIC1.87□□□□□ -2.11
TRAV20A0A0B4J274 RNU2-35P-201ENST00000516446 142 ntBASIC1.87□□□□□ -2.11
TRAV20A0A0B4J274 MIR3664-201ENST00000579074 99 ntBASIC1.87□□□□□ -2.11
TRAV20A0A0B4J274 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.87□□□□□ -2.11
TRAV20A0A0B4J274 MIR8055-201ENST00000610739 97 ntBASIC1.87□□□□□ -2.11
TRAV20A0A0B4J274 MTND5P18-201ENST00000445624 1801 ntBASIC1.87□□□□□ -2.11
TRAV20A0A0B4J274 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
TRAV20A0A0B4J274 SNORA22.1-201ENST00000362701 134 ntBASIC1.86□□□□□ -2.11
TRAV20A0A0B4J274 RNU6-735P-201ENST00000410612 107 ntBASIC1.86□□□□□ -2.11
TRAV20A0A0B4J274 POLR2J4-204ENST00000418424 324 ntBASIC1.86□□□□□ -2.11
TRAV20A0A0B4J274 RPS27P16-201ENST00000425758 201 ntBASIC1.86□□□□□ -2.11
TRAV20A0A0B4J274 AC245517.4-201ENST00000448601 281 ntBASIC1.86□□□□□ -2.11
TRAV20A0A0B4J274 RNA5SP445-201ENST00000515889 115 ntBASIC1.86□□□□□ -2.11
TRAV20A0A0B4J274 AL512310.8-201ENST00000550183 120 ntBASIC1.86□□□□□ -2.11
TRAV20A0A0B4J274 MIR4524B-201ENST00000581569 115 ntBASIC1.86□□□□□ -2.11
TRAV20A0A0B4J274 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.86□□□□□ -2.11
TRAV20A0A0B4J274 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TRAV20A0A0B4J274 RNA5SP432-201ENST00000362480 116 ntBASIC1.85□□□□□ -2.11
TRAV20A0A0B4J274 SNORD114-1-201ENST00000362705 72 ntBASIC1.85□□□□□ -2.11
TRAV20A0A0B4J274 Y_RNA.430-201ENST00000384081 110 ntBASIC1.85□□□□□ -2.11
TRAV20A0A0B4J274 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.85□□□□□ -2.11
TRAV20A0A0B4J274 RPS3AP1-201ENST00000413190 320 ntBASIC1.85□□□□□ -2.11
TRAV20A0A0B4J274 COX6CP6-201ENST00000490840 228 ntBASIC1.85□□□□□ -2.11
TRAV20A0A0B4J274 RNU6-237P-201ENST00000515985 71 ntBASIC1.85□□□□□ -2.11
TRAV20A0A0B4J274 SNORD33.1-201ENST00000516213 88 ntBASIC1.85□□□□□ -2.11
TRAV20A0A0B4J274 CYP3A52P-201ENST00000563326 91 ntBASIC1.85□□□□□ -2.11
TRAV20A0A0B4J274 MIR6766-201ENST00000622641 72 ntBASIC1.85□□□□□ -2.11
TRAV20A0A0B4J274 MIR219B-201ENST00000637023 88 ntBASIC1.85□□□□□ -2.11
TRAV20A0A0B4J274 MIR6841-201ENST00000637129 72 ntBASIC1.85□□□□□ -2.11
TRAV20A0A0B4J274 Z97988.1-201ENST00000637697 135 ntBASIC1.85□□□□□ -2.11
TRAV20A0A0B4J274 SNORA25.3-201ENST00000363205 127 ntBASIC1.84□□□□□ -2.11
TRAV20A0A0B4J274 Y_RNA.273-201ENST00000364703 102 ntBASIC1.84□□□□□ -2.11
TRAV20A0A0B4J274 Y_RNA.353-201ENST00000365440 108 ntBASIC1.84□□□□□ -2.11
TRAV20A0A0B4J274 MIR221-201ENST00000385135 110 ntBASIC1.84□□□□□ -2.11
TRAV20A0A0B4J274 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TRAV20A0A0B4J274 Y_RNA.629-201ENST00000411368 105 ntBASIC1.84□□□□□ -2.11
TRAV20A0A0B4J274 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.84□□□□□ -2.11
TRAV20A0A0B4J274 RNA5SP200-201ENST00000516360 103 ntBASIC1.84□□□□□ -2.11
TRAV20A0A0B4J274 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAV20A0A0B4J274 AC009831.4-201ENST00000620744 325 ntBASIC1.84□□□□□ -2.11
TRAV20A0A0B4J274 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV20A0A0B4J274 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV20A0A0B4J274 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV20A0A0B4J274 snoU13.25-201ENST00000458945 104 ntBASIC1.83□□□□□ -2.12
TRAV20A0A0B4J274 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
TRAV20A0A0B4J274 AL133373.1-201ENST00000497098 94 ntBASIC1.83□□□□□ -2.12
TRAV20A0A0B4J274 RNU6-165P-201ENST00000517170 99 ntBASIC1.83□□□□□ -2.12
TRAV20A0A0B4J274 MTND5P34-201ENST00000568888 325 ntBASIC1.83□□□□□ -2.12
TRAV20A0A0B4J274 AL670379.3-201ENST00000605040 251 ntBASIC1.83□□□□□ -2.12
TRAV20A0A0B4J274 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.83□□□□□ -2.12
TRAV20A0A0B4J274 AL121890.5-201ENST00000620848 304 ntBASIC1.83□□□□□ -2.12
TRAV20A0A0B4J274 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TRAV20A0A0B4J274 MIR21-201ENST00000362134 72 ntBASIC1.82□□□□□ -2.12
TRAV20A0A0B4J274 RNU6-834P-201ENST00000362367 110 ntBASIC1.82□□□□□ -2.12
TRAV20A0A0B4J274 Y_RNA.171-201ENST00000363760 102 ntBASIC1.82□□□□□ -2.12
TRAV20A0A0B4J274 MIR548A3-201ENST00000385297 97 ntBASIC1.82□□□□□ -2.12
TRAV20A0A0B4J274 AL512326.2-201ENST00000426359 151 ntBASIC1.82□□□□□ -2.12
TRAV20A0A0B4J274 snoU13.23-201ENST00000458863 104 ntBASIC1.82□□□□□ -2.12
TRAV20A0A0B4J274 RNU7-113P-201ENST00000459273 62 ntBASIC1.82□□□□□ -2.12
TRAV20A0A0B4J274 AC004812.1-201ENST00000540773 146 ntBASIC1.82□□□□□ -2.12
TRAV20A0A0B4J274 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
TRAV20A0A0B4J274 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
TRAV20A0A0B4J274 AL161722.3-201ENST00000605789 2983 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 Y_RNA.198-201ENST00000364013 98 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 Y_RNA.213-201ENST00000364178 111 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 Y_RNA.354-201ENST00000365448 111 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 RNU6-1056P-201ENST00000383996 107 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 Y_RNA.531-201ENST00000384589 121 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 MIR759-201ENST00000390224 91 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 SNORA48.3-201ENST00000391081 134 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 RNU6-602P-201ENST00000411155 105 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 AC090844.1-201ENST00000422019 156 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 AC245047.7-201ENST00000440265 293 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 RN7SKP88-201ENST00000516847 250 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 RNU6-902P-201ENST00000517212 91 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 AC022523.2-201ENST00000561045 150 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 AC024614.2-201ENST00000577584 372 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 7SK.8-201ENST00000612110 250 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 7SK.11-201ENST00000615477 250 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 7SK.13-201ENST00000622040 250 ntBASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
TRAV20A0A0B4J274 SNORA64-201ENST00000384674 134 ntBASIC1.8□□□□□ -2.12
TRAV20A0A0B4J274 SNORD38B-201ENST00000384690 67 ntBASIC1.8□□□□□ -2.12
TRAV20A0A0B4J274 RNU6-476P-201ENST00000384726 107 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms