Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PCDHA2Q9Y5H9 RNA5SP276-201ENST00000362580 94 ntBASIC2.16□□□□□ -2.06
PCDHA2Q9Y5H9 RNA5SP99-201ENST00000364020 114 ntBASIC2.16□□□□□ -2.06
PCDHA2Q9Y5H9 SNORA16B-201ENST00000364674 135 ntBASIC2.16□□□□□ -2.06
PCDHA2Q9Y5H9 RNU6-203P-201ENST00000384038 104 ntBASIC2.16□□□□□ -2.06
PCDHA2Q9Y5H9 MIR548A3-201ENST00000385297 97 ntBASIC2.16□□□□□ -2.06
PCDHA2Q9Y5H9 AC107297.1-201ENST00000459991 176 ntBASIC2.16□□□□□ -2.06
PCDHA2Q9Y5H9 AC121758.2-201ENST00000553271 193 ntBASIC2.16□□□□□ -2.06
PCDHA2Q9Y5H9 AL353997.5-201ENST00000618886 171 ntBASIC2.16□□□□□ -2.06
PCDHA2Q9Y5H9 MIR203B-201ENST00000636080 86 ntBASIC2.16□□□□□ -2.06
PCDHA2Q9Y5H9 AL596211.1-201ENST00000569873 2277 ntBASIC2.15□□□□□ -2.06
PCDHA2Q9Y5H9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
PCDHA2Q9Y5H9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.15□□□□□ -2.07
PCDHA2Q9Y5H9 RNU6-457P-201ENST00000363999 107 ntBASIC2.15□□□□□ -2.07
PCDHA2Q9Y5H9 Y_RNA.528-201ENST00000384575 108 ntBASIC2.15□□□□□ -2.07
PCDHA2Q9Y5H9 SNORA40.18-201ENST00000391200 128 ntBASIC2.15□□□□□ -2.07
PCDHA2Q9Y5H9 RNU6-589P-201ENST00000516485 107 ntBASIC2.15□□□□□ -2.07
PCDHA2Q9Y5H9 Y_RNA.709-201ENST00000516952 92 ntBASIC2.15□□□□□ -2.07
PCDHA2Q9Y5H9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.15□□□□□ -2.07
PCDHA2Q9Y5H9 AL121890.5-201ENST00000620848 304 ntBASIC2.15□□□□□ -2.07
PCDHA2Q9Y5H9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PCDHA2Q9Y5H9 MIR342-201ENST00000362212 99 ntBASIC2.14□□□□□ -2.07
PCDHA2Q9Y5H9 Y_RNA.370-201ENST00000365589 108 ntBASIC2.14□□□□□ -2.07
PCDHA2Q9Y5H9 RNY4P18-201ENST00000391107 89 ntBASIC2.14□□□□□ -2.07
PCDHA2Q9Y5H9 Y_RNA.649-201ENST00000459077 103 ntBASIC2.14□□□□□ -2.07
PCDHA2Q9Y5H9 SNORD123-201ENST00000459473 70 ntBASIC2.14□□□□□ -2.07
PCDHA2Q9Y5H9 AC079804.2-201ENST00000490376 200 ntBASIC2.14□□□□□ -2.07
PCDHA2Q9Y5H9 COX6CP6-201ENST00000490840 228 ntBASIC2.14□□□□□ -2.07
PCDHA2Q9Y5H9 RNU2-13P-201ENST00000515909 113 ntBASIC2.14□□□□□ -2.07
PCDHA2Q9Y5H9 SNORA31.4-201ENST00000516049 129 ntBASIC2.14□□□□□ -2.07
PCDHA2Q9Y5H9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
PCDHA2Q9Y5H9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PCDHA2Q9Y5H9 AC004965.1-201ENST00000413033 213 ntBASIC2.13□□□□□ -2.07
PCDHA2Q9Y5H9 AL161935.2-201ENST00000414627 60 ntBASIC2.13□□□□□ -2.07
PCDHA2Q9Y5H9 AL445685.2-201ENST00000422551 342 ntBASIC2.13□□□□□ -2.07
PCDHA2Q9Y5H9 SNX2P2-201ENST00000424553 323 ntBASIC2.13□□□□□ -2.07
PCDHA2Q9Y5H9 AL035398.1-201ENST00000430869 322 ntBASIC2.13□□□□□ -2.07
PCDHA2Q9Y5H9 MIR548AR-201ENST00000582191 57 ntBASIC2.13□□□□□ -2.07
PCDHA2Q9Y5H9 AC021443.1-201ENST00000604478 211 ntBASIC2.13□□□□□ -2.07
PCDHA2Q9Y5H9 AL773524.1-201ENST00000614065 229 ntBASIC2.13□□□□□ -2.07
PCDHA2Q9Y5H9 SNORD116-21-201ENST00000384507 92 ntBASIC2.12□□□□□ -2.07
PCDHA2Q9Y5H9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PCDHA2Q9Y5H9 AC022254.1-201ENST00000567857 235 ntBASIC2.12□□□□□ -2.07
PCDHA2Q9Y5H9 FAM106DP-201ENST00000586416 501 ntBASIC2.12□□□□□ -2.07
PCDHA2Q9Y5H9 HSPE1P19-201ENST00000603327 295 ntBASIC2.12□□□□□ -2.07
PCDHA2Q9Y5H9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDHA2Q9Y5H9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
PCDHA2Q9Y5H9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
PCDHA2Q9Y5H9 SNORA24-201ENST00000384096 131 ntBASIC2.11□□□□□ -2.07
PCDHA2Q9Y5H9 MIR570-201ENST00000384917 97 ntBASIC2.11□□□□□ -2.07
PCDHA2Q9Y5H9 SNORD28B-201ENST00000390993 75 ntBASIC2.11□□□□□ -2.07
PCDHA2Q9Y5H9 AL603825.1-201ENST00000438481 80 ntBASIC2.11□□□□□ -2.07
PCDHA2Q9Y5H9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDHA2Q9Y5H9 RNY4P20-201ENST00000516678 93 ntBASIC2.11□□□□□ -2.07
PCDHA2Q9Y5H9 MIR3683-201ENST00000580847 82 ntBASIC2.11□□□□□ -2.07
PCDHA2Q9Y5H9 AC095038.3-201ENST00000634439 195 ntBASIC2.11□□□□□ -2.07
PCDHA2Q9Y5H9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PCDHA2Q9Y5H9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PCDHA2Q9Y5H9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 MIR302B-201ENST00000362188 73 ntBASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 Y_RNA.35-201ENST00000362601 101 ntBASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 Y_RNA.298-201ENST00000364960 107 ntBASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 SNORA6-201ENST00000384033 151 ntBASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 SNORA70.7-201ENST00000384159 133 ntBASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 MIR548A1-201ENST00000385041 97 ntBASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 AC244636.1-201ENST00000421152 228 ntBASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 JTBP1-201ENST00000441314 247 ntBASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 RNU2-11P-201ENST00000459191 187 ntBASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 RNU6-917P-201ENST00000516294 104 ntBASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 SNORA74.3-201ENST00000517108 154 ntBASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 SUMO2P16-201ENST00000519475 264 ntBASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 MIR4305-201ENST00000583252 102 ntBASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 MIR3935-201ENST00000583472 104 ntBASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PCDHA2Q9Y5H9 RNU6-414P-201ENST00000363705 104 ntBASIC2.09□□□□□ -2.07
PCDHA2Q9Y5H9 Y_RNA.198-201ENST00000364013 98 ntBASIC2.09□□□□□ -2.07
PCDHA2Q9Y5H9 RNU6-880P-201ENST00000384526 107 ntBASIC2.09□□□□□ -2.07
PCDHA2Q9Y5H9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PCDHA2Q9Y5H9 SUMO2P12-201ENST00000405924 140 ntBASIC2.09□□□□□ -2.07
PCDHA2Q9Y5H9 AC063976.4-201ENST00000421971 163 ntBASIC2.09□□□□□ -2.07
PCDHA2Q9Y5H9 RPS29P29-201ENST00000456396 171 ntBASIC2.09□□□□□ -2.07
PCDHA2Q9Y5H9 RNU7-164P-201ENST00000459221 62 ntBASIC2.09□□□□□ -2.07
PCDHA2Q9Y5H9 AC021613.1-201ENST00000623880 111 ntBASIC2.09□□□□□ -2.07
PCDHA2Q9Y5H9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.09□□□□□ -2.07
PCDHA2Q9Y5H9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
PCDHA2Q9Y5H9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
PCDHA2Q9Y5H9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
PCDHA2Q9Y5H9 RNU6-661P-201ENST00000362409 107 ntBASIC2.08□□□□□ -2.08
PCDHA2Q9Y5H9 RNU6-439P-201ENST00000384188 106 ntBASIC2.08□□□□□ -2.08
PCDHA2Q9Y5H9 MIR653-201ENST00000385279 96 ntBASIC2.08□□□□□ -2.08
PCDHA2Q9Y5H9 RNU7-67P-201ENST00000459003 62 ntBASIC2.08□□□□□ -2.08
PCDHA2Q9Y5H9 RNU7-123P-201ENST00000515911 60 ntBASIC2.08□□□□□ -2.08
PCDHA2Q9Y5H9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.08□□□□□ -2.08
PCDHA2Q9Y5H9 RNU7-53P-201ENST00000516705 60 ntBASIC2.08□□□□□ -2.08
PCDHA2Q9Y5H9 RNU6-958P-201ENST00000516995 106 ntBASIC2.08□□□□□ -2.08
PCDHA2Q9Y5H9 AC243994.1-201ENST00000618627 109 ntBASIC2.08□□□□□ -2.08
PCDHA2Q9Y5H9 AC106754.2-201ENST00000623006 233 ntBASIC2.08□□□□□ -2.08
PCDHA2Q9Y5H9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms