Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 NEAT1_2.1-201ENST00000620525 105 ntBASIC3.57□□□□□ -1.84
PDZRN3Q9UPQ7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDZRN3Q9UPQ7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.56□□□□□ -1.84
PDZRN3Q9UPQ7 AC108206.1-201ENST00000570186 4159 ntBASIC3.56□□□□□ -1.84
PDZRN3Q9UPQ7 RNU6-1241P-201ENST00000384536 107 ntBASIC3.56□□□□□ -1.84
PDZRN3Q9UPQ7 RNA5SP21-201ENST00000410917 96 ntBASIC3.56□□□□□ -1.84
PDZRN3Q9UPQ7 RN7SKP192-201ENST00000411291 327 ntBASIC3.56□□□□□ -1.84
PDZRN3Q9UPQ7 RNU1-41P-201ENST00000516161 162 ntBASIC3.56□□□□□ -1.84
PDZRN3Q9UPQ7 RNU1-48P-201ENST00000516400 162 ntBASIC3.56□□□□□ -1.84
PDZRN3Q9UPQ7 MIR6733-201ENST00000635723 61 ntBASIC3.56□□□□□ -1.84
PDZRN3Q9UPQ7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
PDZRN3Q9UPQ7 AL442644.1-201ENST00000454390 3105 ntBASIC3.56□□□□□ -1.84
PDZRN3Q9UPQ7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDZRN3Q9UPQ7 AP006437.1-201ENST00000641440 3685 ntBASIC3.55□□□□□ -1.84
PDZRN3Q9UPQ7 SNORA25.6-201ENST00000364121 118 ntBASIC3.55□□□□□ -1.84
PDZRN3Q9UPQ7 SNORA25.9-201ENST00000365087 128 ntBASIC3.55□□□□□ -1.84
PDZRN3Q9UPQ7 Y_RNA.448-201ENST00000384185 108 ntBASIC3.55□□□□□ -1.84
PDZRN3Q9UPQ7 RN7SKP123-201ENST00000410732 291 ntBASIC3.55□□□□□ -1.84
PDZRN3Q9UPQ7 AC074348.1-201ENST00000426503 132 ntBASIC3.55□□□□□ -1.84
PDZRN3Q9UPQ7 AC079150.2-201ENST00000443733 78 ntBASIC3.55□□□□□ -1.84
PDZRN3Q9UPQ7 AC003982.1-202ENST00000469928 248 ntBASIC3.55□□□□□ -1.84
PDZRN3Q9UPQ7 RNU6-56P-201ENST00000516986 93 ntBASIC3.55□□□□□ -1.84
PDZRN3Q9UPQ7 IGLV3-17-201ENST00000519099 244 ntBASIC3.55□□□□□ -1.84
PDZRN3Q9UPQ7 MIR4506-201ENST00000584693 77 ntBASIC3.55□□□□□ -1.84
PDZRN3Q9UPQ7 AC110079.1-202ENST00000635213 138 ntBASIC3.55□□□□□ -1.84
PDZRN3Q9UPQ7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PDZRN3Q9UPQ7 SNORD21-201ENST00000383953 95 ntBASIC3.54□□□□□ -1.84
PDZRN3Q9UPQ7 RNU6-205P-201ENST00000390858 107 ntBASIC3.54□□□□□ -1.84
PDZRN3Q9UPQ7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.54□□□□□ -1.84
PDZRN3Q9UPQ7 SEM1P1-201ENST00000506694 209 ntBASIC3.54□□□□□ -1.84
PDZRN3Q9UPQ7 RNA5SP385-201ENST00000515947 110 ntBASIC3.54□□□□□ -1.84
PDZRN3Q9UPQ7 AC103810.1-201ENST00000579873 453 ntBASIC3.54□□□□□ -1.84
PDZRN3Q9UPQ7 MIR6717-201ENST00000622747 73 ntBASIC3.54□□□□□ -1.84
PDZRN3Q9UPQ7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PDZRN3Q9UPQ7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PDZRN3Q9UPQ7 SNORD56.5-201ENST00000364281 72 ntBASIC3.53□□□□□ -1.84
PDZRN3Q9UPQ7 RNU6-865P-201ENST00000364772 107 ntBASIC3.53□□□□□ -1.84
PDZRN3Q9UPQ7 RNA5SP138-201ENST00000365098 114 ntBASIC3.53□□□□□ -1.84
PDZRN3Q9UPQ7 AL138827.1-201ENST00000402666 306 ntBASIC3.53□□□□□ -1.84
PDZRN3Q9UPQ7 AC123900.1-201ENST00000420390 96 ntBASIC3.53□□□□□ -1.84
PDZRN3Q9UPQ7 RNU1-142P-201ENST00000516682 145 ntBASIC3.53□□□□□ -1.84
PDZRN3Q9UPQ7 RNU7-181P-201ENST00000517234 74 ntBASIC3.53□□□□□ -1.84
PDZRN3Q9UPQ7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.53□□□□□ -1.84
PDZRN3Q9UPQ7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.53□□□□□ -1.84
PDZRN3Q9UPQ7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.53□□□□□ -1.84
PDZRN3Q9UPQ7 MIR338-201ENST00000636369 67 ntBASIC3.53□□□□□ -1.84
PDZRN3Q9UPQ7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDZRN3Q9UPQ7 Y_RNA.332-201ENST00000365271 113 ntBASIC3.52□□□□□ -1.85
PDZRN3Q9UPQ7 SNORA67.4-201ENST00000384688 142 ntBASIC3.52□□□□□ -1.85
PDZRN3Q9UPQ7 AC244636.1-201ENST00000421152 228 ntBASIC3.52□□□□□ -1.85
PDZRN3Q9UPQ7 RNU7-85P-201ENST00000458851 63 ntBASIC3.52□□□□□ -1.85
PDZRN3Q9UPQ7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.52□□□□□ -1.85
PDZRN3Q9UPQ7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.52□□□□□ -1.85
PDZRN3Q9UPQ7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PDZRN3Q9UPQ7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDZRN3Q9UPQ7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.51□□□□□ -1.85
PDZRN3Q9UPQ7 RNA5SP68-201ENST00000363885 119 ntBASIC3.51□□□□□ -1.85
PDZRN3Q9UPQ7 RNU6-342P-201ENST00000384521 104 ntBASIC3.51□□□□□ -1.85
PDZRN3Q9UPQ7 MIR633-201ENST00000384821 98 ntBASIC3.51□□□□□ -1.85
PDZRN3Q9UPQ7 MIR154-201ENST00000385243 84 ntBASIC3.51□□□□□ -1.85
PDZRN3Q9UPQ7 RNU6-1321P-201ENST00000390905 107 ntBASIC3.51□□□□□ -1.85
PDZRN3Q9UPQ7 SNORD88.1-201ENST00000408684 91 ntBASIC3.51□□□□□ -1.85
PDZRN3Q9UPQ7 MIR1267-201ENST00000408723 78 ntBASIC3.51□□□□□ -1.85
PDZRN3Q9UPQ7 RNU2-63P-201ENST00000410792 194 ntBASIC3.51□□□□□ -1.85
PDZRN3Q9UPQ7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.51□□□□□ -1.85
PDZRN3Q9UPQ7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.51□□□□□ -1.85
PDZRN3Q9UPQ7 RNU7-35P-201ENST00000517174 62 ntBASIC3.51□□□□□ -1.85
PDZRN3Q9UPQ7 SNORD3E-202ENST00000627253 216 ntBASIC3.51□□□□□ -1.85
PDZRN3Q9UPQ7 CTSLP2-204ENST00000629029 392 ntBASIC3.51□□□□□ -1.85
PDZRN3Q9UPQ7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PDZRN3Q9UPQ7 RNU7-94P-201ENST00000459576 63 ntBASIC3.5□□□□□ -1.85
PDZRN3Q9UPQ7 RN7SL297P-201ENST00000483161 293 ntBASIC3.5□□□□□ -1.85
PDZRN3Q9UPQ7 AC234781.5-201ENST00000508429 271 ntBASIC3.5□□□□□ -1.85
PDZRN3Q9UPQ7 RNU6-303P-201ENST00000517091 106 ntBASIC3.5□□□□□ -1.85
PDZRN3Q9UPQ7 RNU6-586P-201ENST00000517265 104 ntBASIC3.5□□□□□ -1.85
PDZRN3Q9UPQ7 DNAJC19P9-201ENST00000555084 351 ntBASIC3.5□□□□□ -1.85
PDZRN3Q9UPQ7 MTND5P40-201ENST00000559945 246 ntBASIC3.5□□□□□ -1.85
PDZRN3Q9UPQ7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.5□□□□□ -1.85
PDZRN3Q9UPQ7 MIR6817-201ENST00000615588 66 ntBASIC3.5□□□□□ -1.85
PDZRN3Q9UPQ7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PDZRN3Q9UPQ7 AL161431.1-201ENST00000618966 4205 ntBASIC3.49□□□□□ -1.85
PDZRN3Q9UPQ7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PDZRN3Q9UPQ7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.49□□□□□ -1.85
PDZRN3Q9UPQ7 SNORD38.2-201ENST00000384470 69 ntBASIC3.49□□□□□ -1.85
PDZRN3Q9UPQ7 RNA5SP261-201ENST00000410536 106 ntBASIC3.49□□□□□ -1.85
PDZRN3Q9UPQ7 RNA5SP344-201ENST00000411081 104 ntBASIC3.49□□□□□ -1.85
PDZRN3Q9UPQ7 RNU6-1041P-201ENST00000516254 102 ntBASIC3.49□□□□□ -1.85
PDZRN3Q9UPQ7 RNA5SP24-201ENST00000516478 95 ntBASIC3.49□□□□□ -1.85
PDZRN3Q9UPQ7 SNORD67.1-201ENST00000516618 108 ntBASIC3.49□□□□□ -1.85
PDZRN3Q9UPQ7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PDZRN3Q9UPQ7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.48□□□□□ -1.85
PDZRN3Q9UPQ7 MIR767-201ENST00000390228 109 ntBASIC3.48□□□□□ -1.85
PDZRN3Q9UPQ7 SNORD77.2-201ENST00000391045 68 ntBASIC3.48□□□□□ -1.85
PDZRN3Q9UPQ7 RNA5SP482-201ENST00000391269 118 ntBASIC3.48□□□□□ -1.85
PDZRN3Q9UPQ7 MIR887-201ENST00000401258 79 ntBASIC3.48□□□□□ -1.85
PDZRN3Q9UPQ7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.48□□□□□ -1.85
PDZRN3Q9UPQ7 UBBP3-201ENST00000445497 241 ntBASIC3.48□□□□□ -1.85
PDZRN3Q9UPQ7 RNU6-958P-201ENST00000516995 106 ntBASIC3.48□□□□□ -1.85
PDZRN3Q9UPQ7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDZRN3Q9UPQ7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 204.3 ms