Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 RNA5SP190-201ENST00000365222 118 ntBASIC2.02□□□□□ -2.09
SYNPO2Q9UMS6 U8.17-201ENST00000391292 132 ntBASIC2.02□□□□□ -2.09
SYNPO2Q9UMS6 MIR934-201ENST00000401241 83 ntBASIC2.02□□□□□ -2.09
SYNPO2Q9UMS6 Y_RNA.630-201ENST00000411370 108 ntBASIC2.02□□□□□ -2.09
SYNPO2Q9UMS6 RN7SL274P-201ENST00000492268 272 ntBASIC2.02□□□□□ -2.09
SYNPO2Q9UMS6 RNU6-970P-201ENST00000516312 107 ntBASIC2.02□□□□□ -2.09
SYNPO2Q9UMS6 RNU6-781P-201ENST00000516377 101 ntBASIC2.02□□□□□ -2.09
SYNPO2Q9UMS6 SNORA18.7-201ENST00000516910 131 ntBASIC2.02□□□□□ -2.09
SYNPO2Q9UMS6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.02□□□□□ -2.09
SYNPO2Q9UMS6 HSPE1P19-201ENST00000603327 295 ntBASIC2.02□□□□□ -2.09
SYNPO2Q9UMS6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SYNPO2Q9UMS6 RNU6-1123P-201ENST00000362347 106 ntBASIC2.01□□□□□ -2.09
SYNPO2Q9UMS6 RNU6-414P-201ENST00000363705 104 ntBASIC2.01□□□□□ -2.09
SYNPO2Q9UMS6 Y_RNA.241-201ENST00000364470 117 ntBASIC2.01□□□□□ -2.09
SYNPO2Q9UMS6 MIR194-1-201ENST00000384892 85 ntBASIC2.01□□□□□ -2.09
SYNPO2Q9UMS6 RPS26P48-201ENST00000491713 339 ntBASIC2.01□□□□□ -2.09
SYNPO2Q9UMS6 MIR3198-2-201ENST00000577868 80 ntBASIC2.01□□□□□ -2.09
SYNPO2Q9UMS6 MIR502-201ENST00000606349 86 ntBASIC2.01□□□□□ -2.09
SYNPO2Q9UMS6 AL442644.1-201ENST00000454390 3105 ntBASIC2.01□□□□□ -2.09
SYNPO2Q9UMS6 RNU6-661P-201ENST00000362409 107 ntBASIC2□□□□□ -2.09
SYNPO2Q9UMS6 Y_RNA.351-201ENST00000365436 96 ntBASIC2□□□□□ -2.09
SYNPO2Q9UMS6 MIR570-201ENST00000384917 97 ntBASIC2□□□□□ -2.09
SYNPO2Q9UMS6 MIR452-201ENST00000385020 85 ntBASIC2□□□□□ -2.09
SYNPO2Q9UMS6 MIR136-201ENST00000385207 82 ntBASIC2□□□□□ -2.09
SYNPO2Q9UMS6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
SYNPO2Q9UMS6 SNORD28B-201ENST00000390993 75 ntBASIC2□□□□□ -2.09
SYNPO2Q9UMS6 SNX2P2-201ENST00000424553 323 ntBASIC2□□□□□ -2.09
SYNPO2Q9UMS6 AC087499.4-201ENST00000448505 178 ntBASIC2□□□□□ -2.09
SYNPO2Q9UMS6 RNU6-772P-201ENST00000516042 105 ntBASIC2□□□□□ -2.09
SYNPO2Q9UMS6 SNORA31.4-201ENST00000516049 129 ntBASIC2□□□□□ -2.09
SYNPO2Q9UMS6 RNU6-1061P-201ENST00000516530 99 ntBASIC2□□□□□ -2.09
SYNPO2Q9UMS6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2□□□□□ -2.09
SYNPO2Q9UMS6 MIR4419B-201ENST00000577260 68 ntBASIC2□□□□□ -2.09
SYNPO2Q9UMS6 MIR3618-201ENST00000580330 88 ntBASIC2□□□□□ -2.09
SYNPO2Q9UMS6 FAM106DP-201ENST00000586416 501 ntBASIC2□□□□□ -2.09
SYNPO2Q9UMS6 AP000942.3-201ENST00000603702 160 ntBASIC2□□□□□ -2.09
SYNPO2Q9UMS6 MIR1267-201ENST00000408723 78 ntBASIC1.99□□□□□ -2.09
SYNPO2Q9UMS6 AC004965.1-201ENST00000413033 213 ntBASIC1.99□□□□□ -2.09
SYNPO2Q9UMS6 MTATP6P21-201ENST00000440681 189 ntBASIC1.99□□□□□ -2.09
SYNPO2Q9UMS6 RNA5SP458-201ENST00000516188 119 ntBASIC1.99□□□□□ -2.09
SYNPO2Q9UMS6 RNU6-917P-201ENST00000516294 104 ntBASIC1.99□□□□□ -2.09
SYNPO2Q9UMS6 AC090049.2-201ENST00000550377 109 ntBASIC1.99□□□□□ -2.09
SYNPO2Q9UMS6 AC133485.4-201ENST00000561835 220 ntBASIC1.99□□□□□ -2.09
SYNPO2Q9UMS6 AC138907.4-201ENST00000570107 226 ntBASIC1.99□□□□□ -2.09
SYNPO2Q9UMS6 MIR548AR-201ENST00000582191 57 ntBASIC1.99□□□□□ -2.09
SYNPO2Q9UMS6 AL359881.1-201ENST00000602916 267 ntBASIC1.99□□□□□ -2.09
SYNPO2Q9UMS6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SYNPO2Q9UMS6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
SYNPO2Q9UMS6 SNORA40.5-201ENST00000391061 128 ntBASIC1.98□□□□□ -2.09
SYNPO2Q9UMS6 JTBP1-201ENST00000441314 247 ntBASIC1.98□□□□□ -2.09
SYNPO2Q9UMS6 RNU6-240P-201ENST00000516098 97 ntBASIC1.98□□□□□ -2.09
SYNPO2Q9UMS6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.98□□□□□ -2.09
SYNPO2Q9UMS6 AL391516.1-201ENST00000554380 2449 ntBASIC1.98□□□□□ -2.09
SYNPO2Q9UMS6 AL596211.1-201ENST00000569873 2277 ntBASIC1.97□□□□□ -2.09
SYNPO2Q9UMS6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SYNPO2Q9UMS6 Y_RNA.366-201ENST00000365540 102 ntBASIC1.97□□□□□ -2.09
SYNPO2Q9UMS6 SNORA27-201ENST00000384323 126 ntBASIC1.97□□□□□ -2.09
SYNPO2Q9UMS6 Y_RNA.617-201ENST00000410920 90 ntBASIC1.97□□□□□ -2.09
SYNPO2Q9UMS6 AL161935.2-201ENST00000414627 60 ntBASIC1.97□□□□□ -2.09
SYNPO2Q9UMS6 SNORD13-201ENST00000459299 104 ntBASIC1.97□□□□□ -2.09
SYNPO2Q9UMS6 SNORD123-201ENST00000459473 70 ntBASIC1.97□□□□□ -2.09
SYNPO2Q9UMS6 RN7SKP19-201ENST00000516016 252 ntBASIC1.97□□□□□ -2.09
SYNPO2Q9UMS6 AC090821.2-201ENST00000523552 176 ntBASIC1.96□□□□□ -2.1
SYNPO2Q9UMS6 AC091932.4-201ENST00000623386 200 ntBASIC1.96□□□□□ -2.1
SYNPO2Q9UMS6 RNU6-349P-201ENST00000362402 107 ntBASIC1.95□□□□□ -2.1
SYNPO2Q9UMS6 RNU6-647P-201ENST00000364243 107 ntBASIC1.95□□□□□ -2.1
SYNPO2Q9UMS6 SNORD58C-201ENST00000365223 64 ntBASIC1.95□□□□□ -2.1
SYNPO2Q9UMS6 MIR1263-201ENST00000408324 86 ntBASIC1.95□□□□□ -2.1
SYNPO2Q9UMS6 RNU7-45P-201ENST00000459460 63 ntBASIC1.95□□□□□ -2.1
SYNPO2Q9UMS6 Y_RNA.712-201ENST00000517011 92 ntBASIC1.95□□□□□ -2.1
SYNPO2Q9UMS6 SNORA77B-201ENST00000578179 125 ntBASIC1.95□□□□□ -2.1
SYNPO2Q9UMS6 MIR3914-2-201ENST00000637339 95 ntBASIC1.95□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-34-201ENST00000362441 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-12-201ENST00000362583 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-29-201ENST00000362834 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-9-201ENST00000362912 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-21-201ENST00000362963 81 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-14-201ENST00000363090 81 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-13-201ENST00000363358 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-41-201ENST00000363608 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-11-201ENST00000363616 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-5-201ENST00000363633 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-39-201ENST00000363694 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-4-201ENST00000363810 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-16-201ENST00000363887 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-6-201ENST00000363942 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-42-201ENST00000364273 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-15-201ENST00000364809 81 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 RNU1-133P-201ENST00000364867 167 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD48-201ENST00000364953 64 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-1-201ENST00000364961 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-26-201ENST00000365067 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-10-201ENST00000365073 81 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-43-201ENST00000365503 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 RNA5SP259-201ENST00000365541 109 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 Y_RNA.370-201ENST00000365589 108 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-36-201ENST00000365629 82 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 RNU7-70P-201ENST00000516941 66 ntBASIC1.94□□□□□ -2.1
SYNPO2Q9UMS6 SNORD115-40-201ENST00000606510 82 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 398.6 ms