Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNA5SP289-201ENST00000362332 137 ntBASIC2.63□□□□□ -1.99
CNTN3Q9P232 RNU6-363P-201ENST00000362895 105 ntBASIC2.63□□□□□ -1.99
CNTN3Q9P232 Y_RNA.430-201ENST00000384081 110 ntBASIC2.63□□□□□ -1.99
CNTN3Q9P232 RNU6-301P-201ENST00000384277 107 ntBASIC2.63□□□□□ -1.99
CNTN3Q9P232 SNORD123-201ENST00000459473 70 ntBASIC2.63□□□□□ -1.99
CNTN3Q9P232 AC234781.5-201ENST00000508429 271 ntBASIC2.63□□□□□ -1.99
CNTN3Q9P232 MIR3618-201ENST00000580330 88 ntBASIC2.63□□□□□ -1.99
CNTN3Q9P232 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CNTN3Q9P232 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CNTN3Q9P232 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CNTN3Q9P232 SNORA22.1-201ENST00000362701 134 ntBASIC2.62□□□□□ -1.99
CNTN3Q9P232 RNU6-1131P-201ENST00000364955 107 ntBASIC2.62□□□□□ -1.99
CNTN3Q9P232 Y_RNA.537-201ENST00000384626 109 ntBASIC2.62□□□□□ -1.99
CNTN3Q9P232 Y_RNA.558-201ENST00000384685 113 ntBASIC2.62□□□□□ -1.99
CNTN3Q9P232 SNORA19.1-201ENST00000410656 129 ntBASIC2.62□□□□□ -1.99
CNTN3Q9P232 AC099513.1-201ENST00000490423 301 ntBASIC2.62□□□□□ -1.99
CNTN3Q9P232 AC113410.1-201ENST00000505029 247 ntBASIC2.62□□□□□ -1.99
CNTN3Q9P232 MIR548AR-201ENST00000582191 57 ntBASIC2.62□□□□□ -1.99
CNTN3Q9P232 AC243994.1-201ENST00000618627 109 ntBASIC2.62□□□□□ -1.99
CNTN3Q9P232 AL590808.1-201ENST00000618696 141 ntBASIC2.62□□□□□ -1.99
CNTN3Q9P232 MIR1291-201ENST00000627649 87 ntBASIC2.62□□□□□ -1.99
CNTN3Q9P232 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.62□□□□□ -1.99
CNTN3Q9P232 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.62□□□□□ -1.99
CNTN3Q9P232 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CNTN3Q9P232 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.61□□□□□ -1.99
CNTN3Q9P232 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.61□□□□□ -1.99
CNTN3Q9P232 Y_RNA.220-201ENST00000364244 109 ntBASIC2.61□□□□□ -1.99
CNTN3Q9P232 RNA5SP450-201ENST00000411206 102 ntBASIC2.61□□□□□ -1.99
CNTN3Q9P232 RNU7-45P-201ENST00000459460 63 ntBASIC2.61□□□□□ -1.99
CNTN3Q9P232 AC055731.1-201ENST00000474387 401 ntBASIC2.61□□□□□ -1.99
CNTN3Q9P232 SCARNA23-201ENST00000516060 130 ntBASIC2.61□□□□□ -1.99
CNTN3Q9P232 RNA5SP82-201ENST00000516707 92 ntBASIC2.61□□□□□ -1.99
CNTN3Q9P232 MIR6841-201ENST00000637129 72 ntBASIC2.61□□□□□ -1.99
CNTN3Q9P232 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
CNTN3Q9P232 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CNTN3Q9P232 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CNTN3Q9P232 RNU6-1099P-201ENST00000363533 107 ntBASIC2.6□□□□□ -1.99
CNTN3Q9P232 RNU6-409P-201ENST00000384114 104 ntBASIC2.6□□□□□ -1.99
CNTN3Q9P232 RNU6-360P-201ENST00000390944 104 ntBASIC2.6□□□□□ -1.99
CNTN3Q9P232 SNORD77B-201ENST00000391112 67 ntBASIC2.6□□□□□ -1.99
CNTN3Q9P232 Y_RNA.601-201ENST00000410500 113 ntBASIC2.6□□□□□ -1.99
CNTN3Q9P232 RNU6-733P-201ENST00000410759 104 ntBASIC2.6□□□□□ -1.99
CNTN3Q9P232 RN7SL429P-201ENST00000479090 223 ntBASIC2.6□□□□□ -1.99
CNTN3Q9P232 RN7SL489P-201ENST00000486185 223 ntBASIC2.6□□□□□ -1.99
CNTN3Q9P232 RN7SL327P-201ENST00000488659 223 ntBASIC2.6□□□□□ -1.99
CNTN3Q9P232 RN7SL853P-201ENST00000617250 223 ntBASIC2.6□□□□□ -1.99
CNTN3Q9P232 MIR6717-201ENST00000622747 73 ntBASIC2.6□□□□□ -1.99
CNTN3Q9P232 AC095038.3-201ENST00000634439 195 ntBASIC2.6□□□□□ -1.99
CNTN3Q9P232 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.6□□□□□ -1.99
CNTN3Q9P232 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CNTN3Q9P232 RNY3P2-201ENST00000362918 102 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 Y_RNA.107-201ENST00000363190 121 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 Y_RNA.155-201ENST00000363632 101 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 Y_RNA.171-201ENST00000363760 102 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 SNORD73B-201ENST00000364394 72 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 MIR526A1-201ENST00000384897 85 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 SNORA26.6-201ENST00000391256 115 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 RNA5SP181-201ENST00000410246 98 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 RNA5SP508-201ENST00000411327 119 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 RPS3AP1-201ENST00000413190 320 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 RPS12P2-201ENST00000439728 269 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 AC026436.1-201ENST00000510537 270 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 RNA5SP24-201ENST00000516478 95 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 MIR4694-201ENST00000578534 80 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 AL020996.3-201ENST00000606617 222 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 AC067747.1-201ENST00000608026 250 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 AC046143.2-201ENST00000609789 160 ntBASIC2.59□□□□□ -1.99
CNTN3Q9P232 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
CNTN3Q9P232 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.58□□□□□ -2
CNTN3Q9P232 RNU4-67P-201ENST00000364569 141 ntBASIC2.58□□□□□ -2
CNTN3Q9P232 SNORA6-201ENST00000384033 151 ntBASIC2.58□□□□□ -2
CNTN3Q9P232 RNU6-49P-201ENST00000384256 107 ntBASIC2.58□□□□□ -2
CNTN3Q9P232 RNU4-53P-201ENST00000410828 140 ntBASIC2.58□□□□□ -2
CNTN3Q9P232 RNA5SP100-201ENST00000410903 110 ntBASIC2.58□□□□□ -2
CNTN3Q9P232 RNA5SP59-201ENST00000410922 110 ntBASIC2.58□□□□□ -2
CNTN3Q9P232 AC008413.1-201ENST00000511864 177 ntBASIC2.58□□□□□ -2
CNTN3Q9P232 RNA5SP33-201ENST00000516687 98 ntBASIC2.58□□□□□ -2
CNTN3Q9P232 RNU6-1258P-201ENST00000516911 111 ntBASIC2.58□□□□□ -2
CNTN3Q9P232 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.58□□□□□ -2
CNTN3Q9P232 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.58□□□□□ -2
CNTN3Q9P232 SNORD53-201ENST00000579969 78 ntBASIC2.58□□□□□ -2
CNTN3Q9P232 MIR4791-201ENST00000607666 84 ntBASIC2.58□□□□□ -2
CNTN3Q9P232 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.58□□□□□ -2
CNTN3Q9P232 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.58□□□□□ -2
CNTN3Q9P232 MIR488-201ENST00000365739 83 ntBASIC2.57□□□□□ -2
CNTN3Q9P232 SNORD28B-201ENST00000390993 75 ntBASIC2.57□□□□□ -2
CNTN3Q9P232 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.57□□□□□ -2
CNTN3Q9P232 snoU13.16-201ENST00000459350 104 ntBASIC2.57□□□□□ -2
CNTN3Q9P232 SNORA74.3-201ENST00000517108 154 ntBASIC2.57□□□□□ -2
CNTN3Q9P232 MIR4298-201ENST00000584380 73 ntBASIC2.57□□□□□ -2
CNTN3Q9P232 FAM106DP-201ENST00000586416 501 ntBASIC2.57□□□□□ -2
CNTN3Q9P232 Y_RNA.773-201ENST00000607168 90 ntBASIC2.57□□□□□ -2
CNTN3Q9P232 AL137847.3-201ENST00000611521 109 ntBASIC2.57□□□□□ -2
CNTN3Q9P232 AC064859.1-201ENST00000624741 174 ntBASIC2.57□□□□□ -2
CNTN3Q9P232 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.57□□□□□ -2
CNTN3Q9P232 MIR1255B1-201ENST00000636325 63 ntBASIC2.57□□□□□ -2
CNTN3Q9P232 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.57□□□□□ -2
CNTN3Q9P232 RNU6-1123P-201ENST00000362347 106 ntBASIC2.56□□□□□ -2
CNTN3Q9P232 Y_RNA.466-201ENST00000384294 113 ntBASIC2.56□□□□□ -2
CNTN3Q9P232 RPL23AP6-201ENST00000446637 472 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms