Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
LMCD1Q9NZU5 SNORD45B-201ENST00000364617 72 ntBASIC2.69□□□□□ -1.98
LMCD1Q9NZU5 RNU4-16P-201ENST00000364737 141 ntBASIC2.69□□□□□ -1.98
LMCD1Q9NZU5 RNU6-409P-201ENST00000384114 104 ntBASIC2.69□□□□□ -1.98
LMCD1Q9NZU5 RNU6-1072P-201ENST00000384703 107 ntBASIC2.69□□□□□ -1.98
LMCD1Q9NZU5 RNU6-443P-201ENST00000384780 107 ntBASIC2.69□□□□□ -1.98
LMCD1Q9NZU5 SNRPGP14-201ENST00000435400 219 ntBASIC2.69□□□□□ -1.98
LMCD1Q9NZU5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LMCD1Q9NZU5 AC011753.1-201ENST00000451001 220 ntBASIC2.69□□□□□ -1.98
LMCD1Q9NZU5 RNU7-94P-201ENST00000459576 63 ntBASIC2.69□□□□□ -1.98
LMCD1Q9NZU5 RPS23P4-201ENST00000487908 423 ntBASIC2.69□□□□□ -1.98
LMCD1Q9NZU5 AP003484.1-201ENST00000530974 250 ntBASIC2.69□□□□□ -1.98
LMCD1Q9NZU5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.69□□□□□ -1.98
LMCD1Q9NZU5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.68□□□□□ -1.98
LMCD1Q9NZU5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LMCD1Q9NZU5 SNORA18-201ENST00000384416 132 ntBASIC2.68□□□□□ -1.98
LMCD1Q9NZU5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.68□□□□□ -1.98
LMCD1Q9NZU5 RNU4-69P-201ENST00000410677 143 ntBASIC2.68□□□□□ -1.98
LMCD1Q9NZU5 SNX2P2-201ENST00000424553 323 ntBASIC2.68□□□□□ -1.98
LMCD1Q9NZU5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.68□□□□□ -1.98
LMCD1Q9NZU5 RNA5SP458-201ENST00000516188 119 ntBASIC2.68□□□□□ -1.98
LMCD1Q9NZU5 MIR4635-201ENST00000583759 79 ntBASIC2.68□□□□□ -1.98
LMCD1Q9NZU5 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.68□□□□□ -1.98
LMCD1Q9NZU5 AL353149.1-201ENST00000610667 244 ntBASIC2.68□□□□□ -1.98
LMCD1Q9NZU5 AL353997.5-201ENST00000618886 171 ntBASIC2.68□□□□□ -1.98
LMCD1Q9NZU5 SNORA25B-201ENST00000365507 128 ntBASIC2.67□□□□□ -1.98
LMCD1Q9NZU5 RNU6-1201P-201ENST00000384227 107 ntBASIC2.67□□□□□ -1.98
LMCD1Q9NZU5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
LMCD1Q9NZU5 RNU2-40P-201ENST00000410833 196 ntBASIC2.67□□□□□ -1.98
LMCD1Q9NZU5 MIR4762-201ENST00000585261 75 ntBASIC2.67□□□□□ -1.98
LMCD1Q9NZU5 AL513534.2-201ENST00000603836 250 ntBASIC2.67□□□□□ -1.98
LMCD1Q9NZU5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
LMCD1Q9NZU5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.67□□□□□ -1.98
LMCD1Q9NZU5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.67□□□□□ -1.98
LMCD1Q9NZU5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.66□□□□□ -1.98
LMCD1Q9NZU5 RNU6-633P-201ENST00000362612 103 ntBASIC2.66□□□□□ -1.98
LMCD1Q9NZU5 SNORD116-10-201ENST00000363791 102 ntBASIC2.66□□□□□ -1.98
LMCD1Q9NZU5 MIR627-201ENST00000384979 97 ntBASIC2.66□□□□□ -1.98
LMCD1Q9NZU5 SRIP3-201ENST00000413200 219 ntBASIC2.66□□□□□ -1.98
LMCD1Q9NZU5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.66□□□□□ -1.98
LMCD1Q9NZU5 AL606517.2-201ENST00000442855 241 ntBASIC2.66□□□□□ -1.98
LMCD1Q9NZU5 AC234781.5-201ENST00000508429 271 ntBASIC2.66□□□□□ -1.98
LMCD1Q9NZU5 AC145423.2-201ENST00000610631 239 ntBASIC2.66□□□□□ -1.98
LMCD1Q9NZU5 AL449363.1-201ENST00000617815 186 ntBASIC2.66□□□□□ -1.98
LMCD1Q9NZU5 AC091932.4-201ENST00000623386 200 ntBASIC2.66□□□□□ -1.98
LMCD1Q9NZU5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
LMCD1Q9NZU5 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
LMCD1Q9NZU5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
LMCD1Q9NZU5 RNA5SP99-201ENST00000364020 114 ntBASIC2.65□□□□□ -1.99
LMCD1Q9NZU5 RNU6-616P-201ENST00000384353 107 ntBASIC2.65□□□□□ -1.99
LMCD1Q9NZU5 MIR1262-201ENST00000408276 93 ntBASIC2.65□□□□□ -1.99
LMCD1Q9NZU5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.65□□□□□ -1.99
LMCD1Q9NZU5 AC099677.2-201ENST00000436385 175 ntBASIC2.65□□□□□ -1.99
LMCD1Q9NZU5 RNU7-80P-201ENST00000459562 61 ntBASIC2.65□□□□□ -1.99
LMCD1Q9NZU5 AC004223.1-201ENST00000479840 271 ntBASIC2.65□□□□□ -1.99
LMCD1Q9NZU5 RNU6-1116P-201ENST00000517269 99 ntBASIC2.65□□□□□ -1.99
LMCD1Q9NZU5 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.65□□□□□ -1.99
LMCD1Q9NZU5 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
LMCD1Q9NZU5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
LMCD1Q9NZU5 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.65□□□□□ -1.99
LMCD1Q9NZU5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LMCD1Q9NZU5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 AC016717.2-201ENST00000609089 5141 ntBASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 Y_RNA.99-201ENST00000363138 105 ntBASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 U8.5-201ENST00000364528 136 ntBASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 RNU6-590P-201ENST00000365039 107 ntBASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 SNORD58A-201ENST00000383875 65 ntBASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 Y_RNA.430-201ENST00000384081 110 ntBASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 RNU6-160P-201ENST00000384591 107 ntBASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 CST2P1-201ENST00000425770 87 ntBASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 AL512326.2-201ENST00000426359 151 ntBASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 AC114801.3-201ENST00000510231 177 ntBASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 SNORA31.4-201ENST00000516049 129 ntBASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 AC024995.1-201ENST00000523014 93 ntBASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
LMCD1Q9NZU5 Y_RNA.336-201ENST00000365307 109 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 MIR515-2-201ENST00000384883 83 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 MIR515-1-201ENST00000384884 83 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 U8.15-201ENST00000390947 134 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 RNA5SP109-201ENST00000391010 116 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 SNORA7.5-201ENST00000410672 110 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 RNA5SP144-201ENST00000410846 116 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 AC245047.3-201ENST00000429428 127 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 AC104389.3-201ENST00000445629 235 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 RPL23AP42-201ENST00000471152 471 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 AC114811.1-201ENST00000507207 168 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 RNU6-523P-201ENST00000516304 54 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 MIR4778-201ENST00000577635 80 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 MIR6895-201ENST00000613497 78 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 AC131280.1-202ENST00000624067 4211 ntBASIC2.63□□□□□ -1.99
LMCD1Q9NZU5 RNA5SP493-201ENST00000364115 91 ntBASIC2.62□□□□□ -1.99
LMCD1Q9NZU5 SNORD114-30-201ENST00000364448 72 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms