Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 AC074348.1-201ENST00000426503 132 ntBASIC4.27□□□□□ -1.73
FOXD4L1Q9NU39 MIR4425-201ENST00000580572 84 ntBASIC4.27□□□□□ -1.73
FOXD4L1Q9NU39 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXD4L1Q9NU39 GS1-279B7.1-204ENST00000641809 378 ntBASIC4.27□□□□□ -1.73
FOXD4L1Q9NU39 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXD4L1Q9NU39 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
FOXD4L1Q9NU39 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXD4L1Q9NU39 Y_RNA.12-201ENST00000362393 112 ntBASIC4.26□□□□□ -1.73
FOXD4L1Q9NU39 SNORD56.5-201ENST00000364281 72 ntBASIC4.26□□□□□ -1.73
FOXD4L1Q9NU39 RNA5SP259-201ENST00000365541 109 ntBASIC4.26□□□□□ -1.73
FOXD4L1Q9NU39 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.26□□□□□ -1.73
FOXD4L1Q9NU39 MIR664A-201ENST00000626086 82 ntBASIC4.26□□□□□ -1.73
FOXD4L1Q9NU39 MIR492-201ENST00000638676 116 ntBASIC4.26□□□□□ -1.73
FOXD4L1Q9NU39 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
FOXD4L1Q9NU39 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 Y_RNA.205-201ENST00000364128 113 ntBASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 SNORA67.4-201ENST00000384688 142 ntBASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 MIR154-201ENST00000385243 84 ntBASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 MT-TF-201ENST00000387314 71 ntBASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 AC006989.1-201ENST00000427212 131 ntBASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 YWHAEP2-201ENST00000580066 112 ntBASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 YWHAEP3-201ENST00000582767 121 ntBASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 MIR4658-201ENST00000584344 65 ntBASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
FOXD4L1Q9NU39 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.24□□□□□ -1.73
FOXD4L1Q9NU39 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
FOXD4L1Q9NU39 RNU1-13P-201ENST00000384499 162 ntBASIC4.24□□□□□ -1.73
FOXD4L1Q9NU39 SNORA57.1-201ENST00000391227 145 ntBASIC4.24□□□□□ -1.73
FOXD4L1Q9NU39 RNU7-62P-201ENST00000458856 62 ntBASIC4.24□□□□□ -1.73
FOXD4L1Q9NU39 MIR2276-201ENST00000516886 89 ntBASIC4.24□□□□□ -1.73
FOXD4L1Q9NU39 MIR6875-201ENST00000617506 72 ntBASIC4.24□□□□□ -1.73
FOXD4L1Q9NU39 AP000553.6-201ENST00000641242 118 ntBASIC4.24□□□□□ -1.73
FOXD4L1Q9NU39 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC4.24□□□□□ -1.73
FOXD4L1Q9NU39 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
FOXD4L1Q9NU39 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
FOXD4L1Q9NU39 RNU4-58P-201ENST00000363192 141 ntBASIC4.23□□□□□ -1.73
FOXD4L1Q9NU39 Y_RNA.386-201ENST00000383913 105 ntBASIC4.23□□□□□ -1.73
FOXD4L1Q9NU39 MIR518E-201ENST00000385252 88 ntBASIC4.23□□□□□ -1.73
FOXD4L1Q9NU39 SNORA3.3-201ENST00000408712 125 ntBASIC4.23□□□□□ -1.73
FOXD4L1Q9NU39 AC087499.8-201ENST00000578406 226 ntBASIC4.23□□□□□ -1.73
FOXD4L1Q9NU39 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
FOXD4L1Q9NU39 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.22□□□□□ -1.73
FOXD4L1Q9NU39 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
FOXD4L1Q9NU39 SNORD9-201ENST00000362566 104 ntBASIC4.22□□□□□ -1.73
FOXD4L1Q9NU39 SNORA8.1-201ENST00000384250 140 ntBASIC4.22□□□□□ -1.73
FOXD4L1Q9NU39 MIR194-1-201ENST00000384892 85 ntBASIC4.22□□□□□ -1.73
FOXD4L1Q9NU39 RNA5SP164-201ENST00000516533 110 ntBASIC4.22□□□□□ -1.73
FOXD4L1Q9NU39 SNORA70.18-201ENST00000516696 98 ntBASIC4.22□□□□□ -1.73
FOXD4L1Q9NU39 GTF3AP2-201ENST00000557014 266 ntBASIC4.22□□□□□ -1.73
FOXD4L1Q9NU39 MIR3160-1-201ENST00000577972 85 ntBASIC4.22□□□□□ -1.73
FOXD4L1Q9NU39 AP000942.3-201ENST00000603702 160 ntBASIC4.22□□□□□ -1.73
FOXD4L1Q9NU39 SNORA50A-202ENST00000629536 136 ntBASIC4.22□□□□□ -1.73
FOXD4L1Q9NU39 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
FOXD4L1Q9NU39 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
FOXD4L1Q9NU39 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
FOXD4L1Q9NU39 RNU6-957P-201ENST00000363652 99 ntBASIC4.21□□□□□ -1.74
FOXD4L1Q9NU39 RNU6-800P-201ENST00000384473 103 ntBASIC4.21□□□□□ -1.74
FOXD4L1Q9NU39 MIR513A1-201ENST00000385138 129 ntBASIC4.21□□□□□ -1.74
FOXD4L1Q9NU39 RNU6-205P-201ENST00000390858 107 ntBASIC4.21□□□□□ -1.74
FOXD4L1Q9NU39 SNORD63B-201ENST00000411005 70 ntBASIC4.21□□□□□ -1.74
FOXD4L1Q9NU39 RNU7-106P-201ENST00000459514 67 ntBASIC4.21□□□□□ -1.74
FOXD4L1Q9NU39 AC023632.4-201ENST00000517783 191 ntBASIC4.21□□□□□ -1.74
FOXD4L1Q9NU39 AC026333.2-201ENST00000542164 106 ntBASIC4.21□□□□□ -1.74
FOXD4L1Q9NU39 U6.111-201ENST00000636093 83 ntBASIC4.21□□□□□ -1.74
FOXD4L1Q9NU39 RNU1-33P-201ENST00000364249 162 ntBASIC4.2□□□□□ -1.74
FOXD4L1Q9NU39 AL359837.1-201ENST00000381357 287 ntBASIC4.2□□□□□ -1.74
FOXD4L1Q9NU39 RNU6-1241P-201ENST00000384536 107 ntBASIC4.2□□□□□ -1.74
FOXD4L1Q9NU39 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.2□□□□□ -1.74
FOXD4L1Q9NU39 MIR2115-201ENST00000516657 100 ntBASIC4.2□□□□□ -1.74
FOXD4L1Q9NU39 RNU6-531P-201ENST00000516694 104 ntBASIC4.2□□□□□ -1.74
FOXD4L1Q9NU39 MIR3192-201ENST00000584920 77 ntBASIC4.2□□□□□ -1.74
FOXD4L1Q9NU39 U4.6-201ENST00000621618 127 ntBASIC4.2□□□□□ -1.74
FOXD4L1Q9NU39 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
FOXD4L1Q9NU39 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
FOXD4L1Q9NU39 RNU6-540P-201ENST00000384622 101 ntBASIC4.19□□□□□ -1.74
FOXD4L1Q9NU39 RNU6ATAC3P-201ENST00000387974 126 ntBASIC4.19□□□□□ -1.74
FOXD4L1Q9NU39 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.19□□□□□ -1.74
FOXD4L1Q9NU39 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXD4L1Q9NU39 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
FOXD4L1Q9NU39 MT-TN-201ENST00000387400 73 ntBASIC4.18□□□□□ -1.74
FOXD4L1Q9NU39 MIR1302-7-201ENST00000408841 72 ntBASIC4.18□□□□□ -1.74
FOXD4L1Q9NU39 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.18□□□□□ -1.74
FOXD4L1Q9NU39 RPS29P7-201ENST00000439662 171 ntBASIC4.18□□□□□ -1.74
FOXD4L1Q9NU39 RNU6-922P-201ENST00000516753 99 ntBASIC4.18□□□□□ -1.74
FOXD4L1Q9NU39 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.18□□□□□ -1.74
FOXD4L1Q9NU39 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
FOXD4L1Q9NU39 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
FOXD4L1Q9NU39 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
FOXD4L1Q9NU39 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXD4L1Q9NU39 SNORA25.3-201ENST00000363205 127 ntBASIC4.17□□□□□ -1.74
FOXD4L1Q9NU39 MIR23B-201ENST00000384832 97 ntBASIC4.17□□□□□ -1.74
FOXD4L1Q9NU39 SNORD41-201ENST00000386967 70 ntBASIC4.17□□□□□ -1.74
FOXD4L1Q9NU39 RNA5SP450-201ENST00000411206 102 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms