Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL035470.1-201ENST00000622571 220 ntBASIC3.34□□□□□ -1.87
RTN4Q9NQC3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RTN4Q9NQC3 SNORA63.1-201ENST00000362493 131 ntBASIC3.33□□□□□ -1.88
RTN4Q9NQC3 Y_RNA.116-201ENST00000363292 103 ntBASIC3.33□□□□□ -1.88
RTN4Q9NQC3 Y_RNA.344-201ENST00000365381 112 ntBASIC3.33□□□□□ -1.88
RTN4Q9NQC3 Y_RNA.470-201ENST00000384307 117 ntBASIC3.33□□□□□ -1.88
RTN4Q9NQC3 SNORD15B-201ENST00000384714 146 ntBASIC3.33□□□□□ -1.88
RTN4Q9NQC3 MIR5009-201ENST00000578736 100 ntBASIC3.33□□□□□ -1.88
RTN4Q9NQC3 AC087741.2-201ENST00000619415 172 ntBASIC3.33□□□□□ -1.88
RTN4Q9NQC3 MIR622-201ENST00000638396 96 ntBASIC3.33□□□□□ -1.88
RTN4Q9NQC3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
RTN4Q9NQC3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RTN4Q9NQC3 RNU6-1014P-201ENST00000383940 103 ntBASIC3.32□□□□□ -1.88
RTN4Q9NQC3 MT-TN-201ENST00000387400 73 ntBASIC3.32□□□□□ -1.88
RTN4Q9NQC3 SNORA31.11-201ENST00000516528 139 ntBASIC3.32□□□□□ -1.88
RTN4Q9NQC3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTN4Q9NQC3 RPL39P25-201ENST00000449384 154 ntBASIC3.31□□□□□ -1.88
RTN4Q9NQC3 RN7SL863P-201ENST00000462370 296 ntBASIC3.31□□□□□ -1.88
RTN4Q9NQC3 RNA5SP402-201ENST00000517148 110 ntBASIC3.31□□□□□ -1.88
RTN4Q9NQC3 MIR4264-201ENST00000583520 66 ntBASIC3.31□□□□□ -1.88
RTN4Q9NQC3 UBL5P2-201ENST00000583788 219 ntBASIC3.31□□□□□ -1.88
RTN4Q9NQC3 FAM71BP1-201ENST00000604431 523 ntBASIC3.31□□□□□ -1.88
RTN4Q9NQC3 Z82195.2-201ENST00000612348 18351 ntBASIC3.31□□□□□ -1.88
RTN4Q9NQC3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTN4Q9NQC3 MIR34B-201ENST00000385076 84 ntBASIC3.3□□□□□ -1.88
RTN4Q9NQC3 RNA5SP237-201ENST00000410414 113 ntBASIC3.3□□□□□ -1.88
RTN4Q9NQC3 RNU6-1086P-201ENST00000410930 100 ntBASIC3.3□□□□□ -1.88
RTN4Q9NQC3 RN7SL274P-201ENST00000492268 272 ntBASIC3.3□□□□□ -1.88
RTN4Q9NQC3 SNORD53-201ENST00000579969 78 ntBASIC3.3□□□□□ -1.88
RTN4Q9NQC3 AL391516.1-201ENST00000554380 2449 ntBASIC3.29□□□□□ -1.88
RTN4Q9NQC3 RNU6-816P-201ENST00000390914 107 ntBASIC3.29□□□□□ -1.88
RTN4Q9NQC3 RNU6-1268P-201ENST00000391214 107 ntBASIC3.29□□□□□ -1.88
RTN4Q9NQC3 RNU6-1239P-201ENST00000391310 107 ntBASIC3.29□□□□□ -1.88
RTN4Q9NQC3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.29□□□□□ -1.88
RTN4Q9NQC3 AL512310.8-201ENST00000550183 120 ntBASIC3.29□□□□□ -1.88
RTN4Q9NQC3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.29□□□□□ -1.88
RTN4Q9NQC3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RTN4Q9NQC3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RTN4Q9NQC3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
RTN4Q9NQC3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RTN4Q9NQC3 Y_RNA.163-201ENST00000363702 113 ntBASIC3.28□□□□□ -1.88
RTN4Q9NQC3 SNORA18-201ENST00000384416 132 ntBASIC3.28□□□□□ -1.88
RTN4Q9NQC3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RTN4Q9NQC3 RNU4-47P-201ENST00000410876 114 ntBASIC3.28□□□□□ -1.88
RTN4Q9NQC3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.28□□□□□ -1.88
RTN4Q9NQC3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.28□□□□□ -1.88
RTN4Q9NQC3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTN4Q9NQC3 U8.6-201ENST00000364939 135 ntBASIC3.27□□□□□ -1.89
RTN4Q9NQC3 MIR183-201ENST00000384958 110 ntBASIC3.27□□□□□ -1.89
RTN4Q9NQC3 AC024614.2-201ENST00000577584 372 ntBASIC3.27□□□□□ -1.89
RTN4Q9NQC3 U6.105-201ENST00000637379 88 ntBASIC3.27□□□□□ -1.89
RTN4Q9NQC3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RTN4Q9NQC3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTN4Q9NQC3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTN4Q9NQC3 MIR103A2-201ENST00000362154 78 ntBASIC3.26□□□□□ -1.89
RTN4Q9NQC3 RNA5SP264-201ENST00000363115 107 ntBASIC3.26□□□□□ -1.89
RTN4Q9NQC3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.26□□□□□ -1.89
RTN4Q9NQC3 RNU7-35P-201ENST00000517174 62 ntBASIC3.26□□□□□ -1.89
RTN4Q9NQC3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.26□□□□□ -1.89
RTN4Q9NQC3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTN4Q9NQC3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTN4Q9NQC3 RNU6-363P-201ENST00000362895 105 ntBASIC3.25□□□□□ -1.89
RTN4Q9NQC3 SNORA70.4-201ENST00000365509 134 ntBASIC3.25□□□□□ -1.89
RTN4Q9NQC3 RNU6-409P-201ENST00000384114 104 ntBASIC3.25□□□□□ -1.89
RTN4Q9NQC3 RNU6-106P-201ENST00000384405 107 ntBASIC3.25□□□□□ -1.89
RTN4Q9NQC3 RNU6-902P-201ENST00000517212 91 ntBASIC3.25□□□□□ -1.89
RTN4Q9NQC3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.25□□□□□ -1.89
RTN4Q9NQC3 MIR3618-201ENST00000580330 88 ntBASIC3.25□□□□□ -1.89
RTN4Q9NQC3 PRELID3BP2-201ENST00000605362 201 ntBASIC3.25□□□□□ -1.89
RTN4Q9NQC3 MIR22-201ENST00000362190 85 ntBASIC3.24□□□□□ -1.89
RTN4Q9NQC3 SNORA32-201ENST00000384072 121 ntBASIC3.24□□□□□ -1.89
RTN4Q9NQC3 SNORA54-201ENST00000384281 123 ntBASIC3.24□□□□□ -1.89
RTN4Q9NQC3 RPL31P63-201ENST00000422565 375 ntBASIC3.24□□□□□ -1.89
RTN4Q9NQC3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.24□□□□□ -1.89
RTN4Q9NQC3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.24□□□□□ -1.89
RTN4Q9NQC3 MIR7975-201ENST00000619350 68 ntBASIC3.24□□□□□ -1.89
RTN4Q9NQC3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RTN4Q9NQC3 MIR6073-201ENST00000352083 89 ntBASIC3.23□□□□□ -1.89
RTN4Q9NQC3 Y_RNA.78-201ENST00000362970 110 ntBASIC3.23□□□□□ -1.89
RTN4Q9NQC3 RNA5SP126-201ENST00000365092 109 ntBASIC3.23□□□□□ -1.89
RTN4Q9NQC3 AC005326.1-201ENST00000429197 123 ntBASIC3.23□□□□□ -1.89
RTN4Q9NQC3 uc_338.28-201ENST00000612082 187 ntBASIC3.23□□□□□ -1.89
RTN4Q9NQC3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RTN4Q9NQC3 AC064859.1-201ENST00000624741 174 ntBASIC3.23□□□□□ -1.89
RTN4Q9NQC3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.22□□□□□ -1.89
RTN4Q9NQC3 MIR377-201ENST00000362145 69 ntBASIC3.22□□□□□ -1.89
RTN4Q9NQC3 Y_RNA.155-201ENST00000363632 101 ntBASIC3.22□□□□□ -1.89
RTN4Q9NQC3 RNU4-67P-201ENST00000364569 141 ntBASIC3.22□□□□□ -1.89
RTN4Q9NQC3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC3.22□□□□□ -1.89
RTN4Q9NQC3 RN7SKP88-201ENST00000516847 250 ntBASIC3.22□□□□□ -1.89
RTN4Q9NQC3 AP003716.2-201ENST00000528260 108 ntBASIC3.22□□□□□ -1.89
RTN4Q9NQC3 MIR5680-201ENST00000577577 84 ntBASIC3.22□□□□□ -1.89
RTN4Q9NQC3 7SK.8-201ENST00000612110 250 ntBASIC3.22□□□□□ -1.89
RTN4Q9NQC3 7SK.11-201ENST00000615477 250 ntBASIC3.22□□□□□ -1.89
RTN4Q9NQC3 MIR7112-201ENST00000616126 65 ntBASIC3.22□□□□□ -1.89
RTN4Q9NQC3 7SK.13-201ENST00000622040 250 ntBASIC3.22□□□□□ -1.89
RTN4Q9NQC3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RTN4Q9NQC3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
RTN4Q9NQC3 RNU6-766P-201ENST00000362478 107 ntBASIC3.21□□□□□ -1.9
RTN4Q9NQC3 SNORA25.3-201ENST00000363205 127 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms