Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 RNU6-1258P-201ENST00000516911 111 ntBASIC2.68□□□□□ -1.98
VRTNQ9H8Y1 MIR4299-201ENST00000577899 72 ntBASIC2.68□□□□□ -1.98
VRTNQ9H8Y1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.67□□□□□ -1.98
VRTNQ9H8Y1 RNU6-766P-201ENST00000362478 107 ntBASIC2.67□□□□□ -1.98
VRTNQ9H8Y1 Y_RNA.430-201ENST00000384081 110 ntBASIC2.67□□□□□ -1.98
VRTNQ9H8Y1 SNORA51.5-201ENST00000384126 131 ntBASIC2.67□□□□□ -1.98
VRTNQ9H8Y1 RNU6-1113P-201ENST00000384348 107 ntBASIC2.67□□□□□ -1.98
VRTNQ9H8Y1 SNORA67.4-201ENST00000384688 142 ntBASIC2.67□□□□□ -1.98
VRTNQ9H8Y1 MIR653-201ENST00000385279 96 ntBASIC2.67□□□□□ -1.98
VRTNQ9H8Y1 RNU6-1190P-201ENST00000410811 104 ntBASIC2.67□□□□□ -1.98
VRTNQ9H8Y1 AL161935.2-201ENST00000414627 60 ntBASIC2.67□□□□□ -1.98
VRTNQ9H8Y1 AC010297.1-201ENST00000623948 149 ntBASIC2.67□□□□□ -1.98
VRTNQ9H8Y1 MIR6841-201ENST00000637129 72 ntBASIC2.67□□□□□ -1.98
VRTNQ9H8Y1 RNU6-1298P-201ENST00000362456 101 ntBASIC2.66□□□□□ -1.98
VRTNQ9H8Y1 SNORD115-2-201ENST00000362842 82 ntBASIC2.66□□□□□ -1.98
VRTNQ9H8Y1 SNORD115-20-201ENST00000365099 82 ntBASIC2.66□□□□□ -1.98
VRTNQ9H8Y1 MIR513A1-201ENST00000385138 129 ntBASIC2.66□□□□□ -1.98
VRTNQ9H8Y1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
VRTNQ9H8Y1 AL359511.1-201ENST00000402970 211 ntBASIC2.66□□□□□ -1.98
VRTNQ9H8Y1 RNU4-69P-201ENST00000410677 143 ntBASIC2.66□□□□□ -1.98
VRTNQ9H8Y1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.66□□□□□ -1.98
VRTNQ9H8Y1 AL049779.4-201ENST00000604500 156 ntBASIC2.66□□□□□ -1.98
VRTNQ9H8Y1 MIR8074-201ENST00000615081 81 ntBASIC2.66□□□□□ -1.98
VRTNQ9H8Y1 AC087741.2-201ENST00000619415 172 ntBASIC2.66□□□□□ -1.98
VRTNQ9H8Y1 AC008133.2-201ENST00000624540 351 ntBASIC2.66□□□□□ -1.98
VRTNQ9H8Y1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
VRTNQ9H8Y1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.98
VRTNQ9H8Y1 RNU6-439P-201ENST00000384188 106 ntBASIC2.65□□□□□ -1.99
VRTNQ9H8Y1 AL451046.2-201ENST00000403074 277 ntBASIC2.65□□□□□ -1.99
VRTNQ9H8Y1 RPS12P2-201ENST00000439728 269 ntBASIC2.65□□□□□ -1.99
VRTNQ9H8Y1 AC113410.1-201ENST00000505029 247 ntBASIC2.65□□□□□ -1.99
VRTNQ9H8Y1 RNA5SP33-201ENST00000516687 98 ntBASIC2.65□□□□□ -1.99
VRTNQ9H8Y1 RNA5SP170-201ENST00000517150 101 ntBASIC2.65□□□□□ -1.99
VRTNQ9H8Y1 MIR8055-201ENST00000610739 97 ntBASIC2.65□□□□□ -1.99
VRTNQ9H8Y1 AL162726.3-218ENST00000636401 95 ntBASIC2.65□□□□□ -1.99
VRTNQ9H8Y1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
VRTNQ9H8Y1 Y_RNA.328-201ENST00000365208 113 ntBASIC2.64□□□□□ -1.99
VRTNQ9H8Y1 RPS3AP1-201ENST00000413190 320 ntBASIC2.64□□□□□ -1.99
VRTNQ9H8Y1 RPL39P25-201ENST00000449384 154 ntBASIC2.64□□□□□ -1.99
VRTNQ9H8Y1 AL513534.2-201ENST00000603836 250 ntBASIC2.64□□□□□ -1.99
VRTNQ9H8Y1 SNORA1.1-201ENST00000364671 133 ntBASIC2.63□□□□□ -1.99
VRTNQ9H8Y1 DEFA7P-201ENST00000382676 285 ntBASIC2.63□□□□□ -1.99
VRTNQ9H8Y1 MIR1912-201ENST00000410389 80 ntBASIC2.63□□□□□ -1.99
VRTNQ9H8Y1 AL513328.1-201ENST00000446460 224 ntBASIC2.63□□□□□ -1.99
VRTNQ9H8Y1 MIR6895-201ENST00000613497 78 ntBASIC2.63□□□□□ -1.99
VRTNQ9H8Y1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VRTNQ9H8Y1 RNU6-816P-201ENST00000390914 107 ntBASIC2.62□□□□□ -1.99
VRTNQ9H8Y1 RNU6-1268P-201ENST00000391214 107 ntBASIC2.62□□□□□ -1.99
VRTNQ9H8Y1 RNU6-1239P-201ENST00000391310 107 ntBASIC2.62□□□□□ -1.99
VRTNQ9H8Y1 HMGN1P33-201ENST00000432945 451 ntBASIC2.62□□□□□ -1.99
VRTNQ9H8Y1 RN7SL429P-201ENST00000479090 223 ntBASIC2.62□□□□□ -1.99
VRTNQ9H8Y1 RN7SL489P-201ENST00000486185 223 ntBASIC2.62□□□□□ -1.99
VRTNQ9H8Y1 RN7SL327P-201ENST00000488659 223 ntBASIC2.62□□□□□ -1.99
VRTNQ9H8Y1 Y_RNA.677-201ENST00000516401 85 ntBASIC2.62□□□□□ -1.99
VRTNQ9H8Y1 RNU6-537P-201ENST00000517277 103 ntBASIC2.62□□□□□ -1.99
VRTNQ9H8Y1 RN7SL853P-201ENST00000617250 223 ntBASIC2.62□□□□□ -1.99
VRTNQ9H8Y1 MIR1291-201ENST00000627649 87 ntBASIC2.62□□□□□ -1.99
VRTNQ9H8Y1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VRTNQ9H8Y1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VRTNQ9H8Y1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VRTNQ9H8Y1 MIR6073-201ENST00000352083 89 ntBASIC2.61□□□□□ -1.99
VRTNQ9H8Y1 RNU6-301P-201ENST00000384277 107 ntBASIC2.61□□□□□ -1.99
VRTNQ9H8Y1 Y_RNA.470-201ENST00000384307 117 ntBASIC2.61□□□□□ -1.99
VRTNQ9H8Y1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.61□□□□□ -1.99
VRTNQ9H8Y1 SNORA44.1-201ENST00000517031 108 ntBASIC2.61□□□□□ -1.99
VRTNQ9H8Y1 AC067747.1-201ENST00000608026 250 ntBASIC2.61□□□□□ -1.99
VRTNQ9H8Y1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.6□□□□□ -1.99
VRTNQ9H8Y1 Y_RNA.43-201ENST00000362670 111 ntBASIC2.6□□□□□ -1.99
VRTNQ9H8Y1 SNORD115-19-201ENST00000363098 82 ntBASIC2.6□□□□□ -1.99
VRTNQ9H8Y1 SNORD115-18-201ENST00000363293 82 ntBASIC2.6□□□□□ -1.99
VRTNQ9H8Y1 SNORD115-17-201ENST00000364612 82 ntBASIC2.6□□□□□ -1.99
VRTNQ9H8Y1 Y_RNA.507-201ENST00000384500 99 ntBASIC2.6□□□□□ -1.99
VRTNQ9H8Y1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.6□□□□□ -1.99
VRTNQ9H8Y1 Y_RNA.694-201ENST00000516677 117 ntBASIC2.6□□□□□ -1.99
VRTNQ9H8Y1 SNORA77B-201ENST00000578179 125 ntBASIC2.6□□□□□ -1.99
VRTNQ9H8Y1 MIR3618-201ENST00000580330 88 ntBASIC2.6□□□□□ -1.99
VRTNQ9H8Y1 AL627230.6-201ENST00000611129 280 ntBASIC2.6□□□□□ -1.99
VRTNQ9H8Y1 Y_RNA.354-201ENST00000365448 111 ntBASIC2.59□□□□□ -1.99
VRTNQ9H8Y1 SNORD77B-201ENST00000391112 67 ntBASIC2.59□□□□□ -1.99
VRTNQ9H8Y1 RNA5SP233-201ENST00000459153 113 ntBASIC2.59□□□□□ -1.99
VRTNQ9H8Y1 RNA5SP82-201ENST00000516707 92 ntBASIC2.59□□□□□ -1.99
VRTNQ9H8Y1 MIR548AE2-201ENST00000583456 67 ntBASIC2.59□□□□□ -1.99
VRTNQ9H8Y1 MIR4251-201ENST00000635819 61 ntBASIC2.59□□□□□ -1.99
VRTNQ9H8Y1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.58□□□□□ -2
VRTNQ9H8Y1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.58□□□□□ -2
VRTNQ9H8Y1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.58□□□□□ -2
VRTNQ9H8Y1 Y_RNA.773-201ENST00000607168 90 ntBASIC2.58□□□□□ -2
VRTNQ9H8Y1 Z97988.1-201ENST00000637697 135 ntBASIC2.58□□□□□ -2
VRTNQ9H8Y1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VRTNQ9H8Y1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
VRTNQ9H8Y1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
VRTNQ9H8Y1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
VRTNQ9H8Y1 Y_RNA.78-201ENST00000362970 110 ntBASIC2.57□□□□□ -2
VRTNQ9H8Y1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.57□□□□□ -2
VRTNQ9H8Y1 MIR1255B1-201ENST00000636325 63 ntBASIC2.57□□□□□ -2
VRTNQ9H8Y1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
VRTNQ9H8Y1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
VRTNQ9H8Y1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VRTNQ9H8Y1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
VRTNQ9H8Y1 MIR449A-201ENST00000362113 91 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms