Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 SNORA25.6-201ENST00000364121 118 ntBASIC2.65□□□□□ -1.99
CNTNAP4Q9C0A0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.65□□□□□ -1.99
CNTNAP4Q9C0A0 RNU6-816P-201ENST00000390914 107 ntBASIC2.65□□□□□ -1.99
CNTNAP4Q9C0A0 RNU6-1268P-201ENST00000391214 107 ntBASIC2.65□□□□□ -1.99
CNTNAP4Q9C0A0 U8.17-201ENST00000391292 132 ntBASIC2.65□□□□□ -1.99
CNTNAP4Q9C0A0 RNU6-1239P-201ENST00000391310 107 ntBASIC2.65□□□□□ -1.99
CNTNAP4Q9C0A0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.65□□□□□ -1.99
CNTNAP4Q9C0A0 SNORA18.7-201ENST00000516910 131 ntBASIC2.65□□□□□ -1.99
CNTNAP4Q9C0A0 MIR4666B-201ENST00000578142 81 ntBASIC2.65□□□□□ -1.99
CNTNAP4Q9C0A0 MIR5588-201ENST00000581890 63 ntBASIC2.65□□□□□ -1.99
CNTNAP4Q9C0A0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CNTNAP4Q9C0A0 MIR337-201ENST00000362281 93 ntBASIC2.64□□□□□ -1.99
CNTNAP4Q9C0A0 MIR583-201ENST00000384846 75 ntBASIC2.64□□□□□ -1.99
CNTNAP4Q9C0A0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CNTNAP4Q9C0A0 AL451046.2-201ENST00000403074 277 ntBASIC2.64□□□□□ -1.99
CNTNAP4Q9C0A0 RNU6-938P-201ENST00000411285 103 ntBASIC2.64□□□□□ -1.99
CNTNAP4Q9C0A0 RNU2-35P-201ENST00000516446 142 ntBASIC2.64□□□□□ -1.99
CNTNAP4Q9C0A0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.64□□□□□ -1.99
CNTNAP4Q9C0A0 MIR8054-201ENST00000620877 86 ntBASIC2.64□□□□□ -1.99
CNTNAP4Q9C0A0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CNTNAP4Q9C0A0 RNU1-58P-201ENST00000362413 163 ntBASIC2.63□□□□□ -1.99
CNTNAP4Q9C0A0 RNU6-219P-201ENST00000364728 107 ntBASIC2.63□□□□□ -1.99
CNTNAP4Q9C0A0 Y_RNA.601-201ENST00000410500 113 ntBASIC2.63□□□□□ -1.99
CNTNAP4Q9C0A0 RNU6-402P-201ENST00000410678 103 ntBASIC2.63□□□□□ -1.99
CNTNAP4Q9C0A0 BTF3P4-201ENST00000418852 495 ntBASIC2.63□□□□□ -1.99
CNTNAP4Q9C0A0 RNU7-164P-201ENST00000459221 62 ntBASIC2.63□□□□□ -1.99
CNTNAP4Q9C0A0 RNA5SP182-201ENST00000516064 82 ntBASIC2.63□□□□□ -1.99
CNTNAP4Q9C0A0 SNORD36C-201ENST00000516733 66 ntBASIC2.63□□□□□ -1.99
CNTNAP4Q9C0A0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CNTNAP4Q9C0A0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 Y_RNA.190-201ENST00000363964 101 ntBASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 RNU4-36P-201ENST00000364294 144 ntBASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 RNU6-242P-201ENST00000384359 107 ntBASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 RNU6-424P-201ENST00000384367 105 ntBASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 RN7SKP200-201ENST00000410564 320 ntBASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 AC096949.1-201ENST00000412047 152 ntBASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 AC004941.2-201ENST00000427009 228 ntBASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 AL353813.1-201ENST00000440700 253 ntBASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 RNU7-171P-201ENST00000459581 62 ntBASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 AC113410.1-201ENST00000505029 247 ntBASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 MIR3163-201ENST00000581592 73 ntBASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 MIR4305-201ENST00000583252 102 ntBASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 AC002984.1-201ENST00000591692 448 ntBASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 AC069114.2-201ENST00000604699 304 ntBASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 AC091304.10-201ENST00000641554 121 ntBASIC2.62□□□□□ -1.99
CNTNAP4Q9C0A0 AL442644.1-201ENST00000454390 3105 ntBASIC2.61□□□□□ -1.99
CNTNAP4Q9C0A0 MAPK10-266ENST00000641066 6555 ntBASIC2.61□□□□□ -1.99
CNTNAP4Q9C0A0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.61□□□□□ -1.99
CNTNAP4Q9C0A0 RNU6-170P-201ENST00000362832 104 ntBASIC2.61□□□□□ -1.99
CNTNAP4Q9C0A0 SNORA25.9-201ENST00000365087 128 ntBASIC2.61□□□□□ -1.99
CNTNAP4Q9C0A0 MIR577-201ENST00000385196 96 ntBASIC2.61□□□□□ -1.99
CNTNAP4Q9C0A0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.61□□□□□ -1.99
CNTNAP4Q9C0A0 HSPE1P19-201ENST00000603327 295 ntBASIC2.61□□□□□ -1.99
CNTNAP4Q9C0A0 AC087741.2-201ENST00000619415 172 ntBASIC2.61□□□□□ -1.99
CNTNAP4Q9C0A0 MIR1255B1-201ENST00000636325 63 ntBASIC2.61□□□□□ -1.99
CNTNAP4Q9C0A0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CNTNAP4Q9C0A0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 SNORD115-13-201ENST00000363358 82 ntBASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 SNORD115-16-201ENST00000363887 82 ntBASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 SNORD115-1-201ENST00000364961 82 ntBASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 DEFA7P-201ENST00000382676 285 ntBASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 Y_RNA.437-201ENST00000384113 113 ntBASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 RNU6-163P-201ENST00000384396 106 ntBASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 MIR1912-201ENST00000410389 80 ntBASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 AL035398.1-201ENST00000430869 322 ntBASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 MIR3618-201ENST00000580330 88 ntBASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 MIR4777-201ENST00000583710 86 ntBASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 AC078899.2-201ENST00000595282 212 ntBASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 Y_RNA.773-201ENST00000607168 90 ntBASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 AC091932.4-201ENST00000623386 200 ntBASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
CNTNAP4Q9C0A0 Z82195.2-201ENST00000612348 18351 ntBASIC2.59□□□□□ -1.99
CNTNAP4Q9C0A0 RNU6-833P-201ENST00000363486 107 ntBASIC2.59□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-35-201ENST00000365122 82 ntBASIC2.59□□□□□ -2
CNTNAP4Q9C0A0 RNU1-138P-201ENST00000384093 164 ntBASIC2.59□□□□□ -2
CNTNAP4Q9C0A0 Y_RNA.531-201ENST00000384589 121 ntBASIC2.59□□□□□ -2
CNTNAP4Q9C0A0 AC019129.1-201ENST00000403786 261 ntBASIC2.59□□□□□ -2
CNTNAP4Q9C0A0 AL034345.1-201ENST00000407768 123 ntBASIC2.59□□□□□ -2
CNTNAP4Q9C0A0 RNU7-96P-201ENST00000459535 64 ntBASIC2.59□□□□□ -2
CNTNAP4Q9C0A0 AC114811.1-201ENST00000507207 168 ntBASIC2.59□□□□□ -2
CNTNAP4Q9C0A0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.59□□□□□ -2
CNTNAP4Q9C0A0 snoU13.31-201ENST00000607291 104 ntBASIC2.59□□□□□ -2
CNTNAP4Q9C0A0 AC010297.1-201ENST00000623948 149 ntBASIC2.59□□□□□ -2
CNTNAP4Q9C0A0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.59□□□□□ -2
CNTNAP4Q9C0A0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
CNTNAP4Q9C0A0 AC245060.5-201ENST00000610778 3293 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 MIR6073-201ENST00000352083 89 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-34-201ENST00000362441 82 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-12-201ENST00000362583 82 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-29-201ENST00000362834 82 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-9-201ENST00000362912 82 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-21-201ENST00000362963 81 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-14-201ENST00000363090 81 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-41-201ENST00000363608 82 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-11-201ENST00000363616 82 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-5-201ENST00000363633 82 ntBASIC2.58□□□□□ -2
CNTNAP4Q9C0A0 SNORD115-39-201ENST00000363694 82 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms