Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 RNU1-133P-201ENST00000364867 167 ntBASIC2.47□□□□□ -2.01
ARID3AQ99856 RNU6-915P-201ENST00000364943 103 ntBASIC2.47□□□□□ -2.01
ARID3AQ99856 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
ARID3AQ99856 TMSB4XP3-201ENST00000445144 114 ntBASIC2.47□□□□□ -2.01
ARID3AQ99856 Y_RNA.692-201ENST00000516627 105 ntBASIC2.47□□□□□ -2.01
ARID3AQ99856 SNRPGP19-201ENST00000603826 189 ntBASIC2.47□□□□□ -2.01
ARID3AQ99856 RNA5SP160-201ENST00000364866 120 ntBASIC2.46□□□□□ -2.02
ARID3AQ99856 Y_RNA.586-201ENST00000391146 98 ntBASIC2.46□□□□□ -2.02
ARID3AQ99856 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ARID3AQ99856 RNU7-67P-201ENST00000459003 62 ntBASIC2.46□□□□□ -2.02
ARID3AQ99856 RNA5SP281-201ENST00000516504 135 ntBASIC2.46□□□□□ -2.02
ARID3AQ99856 MIR5007-201ENST00000583098 95 ntBASIC2.46□□□□□ -2.02
ARID3AQ99856 AL096861.1-201ENST00000610899 123 ntBASIC2.46□□□□□ -2.02
ARID3AQ99856 MIR4251-201ENST00000635819 61 ntBASIC2.46□□□□□ -2.02
ARID3AQ99856 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ARID3AQ99856 RNU6-257P-201ENST00000410238 98 ntBASIC2.45□□□□□ -2.02
ARID3AQ99856 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.45□□□□□ -2.02
ARID3AQ99856 MTND4LP9-201ENST00000427694 174 ntBASIC2.45□□□□□ -2.02
ARID3AQ99856 AL133373.1-201ENST00000497098 94 ntBASIC2.45□□□□□ -2.02
ARID3AQ99856 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.45□□□□□ -2.02
ARID3AQ99856 RNU7-41P-201ENST00000515917 61 ntBASIC2.45□□□□□ -2.02
ARID3AQ99856 Y_RNA.690-201ENST00000516603 95 ntBASIC2.45□□□□□ -2.02
ARID3AQ99856 MIR3121-201ENST00000579680 77 ntBASIC2.45□□□□□ -2.02
ARID3AQ99856 MIR4285-201ENST00000581001 85 ntBASIC2.45□□□□□ -2.02
ARID3AQ99856 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.45□□□□□ -2.02
ARID3AQ99856 MIR6766-201ENST00000622641 72 ntBASIC2.45□□□□□ -2.02
ARID3AQ99856 MIR6873-201ENST00000622788 63 ntBASIC2.45□□□□□ -2.02
ARID3AQ99856 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
ARID3AQ99856 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ARID3AQ99856 RNA5SP261-201ENST00000410536 106 ntBASIC2.44□□□□□ -2.02
ARID3AQ99856 RNU6-1054P-201ENST00000411293 104 ntBASIC2.44□□□□□ -2.02
ARID3AQ99856 RNU2-11P-201ENST00000459191 187 ntBASIC2.44□□□□□ -2.02
ARID3AQ99856 AC108729.3-201ENST00000513484 108 ntBASIC2.44□□□□□ -2.02
ARID3AQ99856 RNU6-165P-201ENST00000517170 99 ntBASIC2.44□□□□□ -2.02
ARID3AQ99856 Y_RNA.757-201ENST00000578934 114 ntBASIC2.44□□□□□ -2.02
ARID3AQ99856 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
ARID3AQ99856 Y_RNA.280-201ENST00000364765 112 ntBASIC2.43□□□□□ -2.02
ARID3AQ99856 RNU6-81P-201ENST00000365608 104 ntBASIC2.43□□□□□ -2.02
ARID3AQ99856 MIR539-201ENST00000365690 78 ntBASIC2.43□□□□□ -2.02
ARID3AQ99856 RN7SKP223-201ENST00000410582 62 ntBASIC2.43□□□□□ -2.02
ARID3AQ99856 Y_RNA.686-201ENST00000516548 134 ntBASIC2.43□□□□□ -2.02
ARID3AQ99856 DNAJC19P9-201ENST00000555084 351 ntBASIC2.43□□□□□ -2.02
ARID3AQ99856 MIR3192-201ENST00000584920 77 ntBASIC2.43□□□□□ -2.02
ARID3AQ99856 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ARID3AQ99856 Y_RNA.226-201ENST00000364337 114 ntBASIC2.42□□□□□ -2.02
ARID3AQ99856 RNY1P6-201ENST00000384193 109 ntBASIC2.42□□□□□ -2.02
ARID3AQ99856 MIR1287-201ENST00000408492 90 ntBASIC2.42□□□□□ -2.02
ARID3AQ99856 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.42□□□□□ -2.02
ARID3AQ99856 RNU6-789P-201ENST00000517105 102 ntBASIC2.42□□□□□ -2.02
ARID3AQ99856 AP003716.2-201ENST00000528260 108 ntBASIC2.42□□□□□ -2.02
ARID3AQ99856 MIR302B-201ENST00000362188 73 ntBASIC2.41□□□□□ -2.02
ARID3AQ99856 RNU6-349P-201ENST00000362402 107 ntBASIC2.41□□□□□ -2.02
ARID3AQ99856 Y_RNA.651-201ENST00000459380 103 ntBASIC2.41□□□□□ -2.02
ARID3AQ99856 SNORA31.4-201ENST00000516049 129 ntBASIC2.41□□□□□ -2.02
ARID3AQ99856 RNU6-958P-201ENST00000516995 106 ntBASIC2.41□□□□□ -2.02
ARID3AQ99856 MIR221-201ENST00000385135 110 ntBASIC2.4□□□□□ -2.03
ARID3AQ99856 AC019129.1-201ENST00000403786 261 ntBASIC2.4□□□□□ -2.03
ARID3AQ99856 RNU11-2P-201ENST00000516898 142 ntBASIC2.4□□□□□ -2.03
ARID3AQ99856 MIR3910-1-201ENST00000580936 111 ntBASIC2.4□□□□□ -2.03
ARID3AQ99856 MIR3935-201ENST00000583472 104 ntBASIC2.4□□□□□ -2.03
ARID3AQ99856 AL022345.2-201ENST00000606307 135 ntBASIC2.4□□□□□ -2.03
ARID3AQ99856 MIR8055-201ENST00000610739 97 ntBASIC2.4□□□□□ -2.03
ARID3AQ99856 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.39□□□□□ -2.03
ARID3AQ99856 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ARID3AQ99856 Y_RNA.430-201ENST00000384081 110 ntBASIC2.39□□□□□ -2.03
ARID3AQ99856 MIR570-201ENST00000384917 97 ntBASIC2.39□□□□□ -2.03
ARID3AQ99856 RNU6-1319P-201ENST00000390855 104 ntBASIC2.39□□□□□ -2.03
ARID3AQ99856 RNU6-747P-201ENST00000390928 104 ntBASIC2.39□□□□□ -2.03
ARID3AQ99856 RNU6-241P-201ENST00000391148 104 ntBASIC2.39□□□□□ -2.03
ARID3AQ99856 RNU6-177P-201ENST00000411257 104 ntBASIC2.39□□□□□ -2.03
ARID3AQ99856 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.39□□□□□ -2.03
ARID3AQ99856 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.39□□□□□ -2.03
ARID3AQ99856 AL020996.3-201ENST00000606617 222 ntBASIC2.39□□□□□ -2.03
ARID3AQ99856 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.39□□□□□ -2.03
ARID3AQ99856 RNU6-309P-201ENST00000364573 106 ntBASIC2.38□□□□□ -2.03
ARID3AQ99856 RNU6-893P-201ENST00000458841 100 ntBASIC2.38□□□□□ -2.03
ARID3AQ99856 RNU6-406P-201ENST00000516470 107 ntBASIC2.38□□□□□ -2.03
ARID3AQ99856 AC091895.1-201ENST00000624494 256 ntBASIC2.38□□□□□ -2.03
ARID3AQ99856 AL596211.1-201ENST00000569873 2277 ntBASIC2.38□□□□□ -2.03
ARID3AQ99856 SNORA20-201ENST00000384662 132 ntBASIC2.37□□□□□ -2.03
ARID3AQ99856 MIR3152-201ENST00000579801 74 ntBASIC2.37□□□□□ -2.03
ARID3AQ99856 AC009831.4-201ENST00000620744 325 ntBASIC2.37□□□□□ -2.03
ARID3AQ99856 Z97988.1-201ENST00000637697 135 ntBASIC2.37□□□□□ -2.03
ARID3AQ99856 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.37□□□□□ -2.03
ARID3AQ99856 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
ARID3AQ99856 SNORD114-1-201ENST00000362705 72 ntBASIC2.36□□□□□ -2.03
ARID3AQ99856 RNU6-647P-201ENST00000364243 107 ntBASIC2.36□□□□□ -2.03
ARID3AQ99856 SNORD113-1-201ENST00000365321 69 ntBASIC2.36□□□□□ -2.03
ARID3AQ99856 RNU6-913P-201ENST00000390913 95 ntBASIC2.36□□□□□ -2.03
ARID3AQ99856 RNU4-61P-201ENST00000411243 107 ntBASIC2.36□□□□□ -2.03
ARID3AQ99856 AL356320.1-201ENST00000429616 163 ntBASIC2.36□□□□□ -2.03
ARID3AQ99856 RNU6-970P-201ENST00000516312 107 ntBASIC2.36□□□□□ -2.03
ARID3AQ99856 RN7SKP88-201ENST00000516847 250 ntBASIC2.36□□□□□ -2.03
ARID3AQ99856 MIR3683-201ENST00000580847 82 ntBASIC2.36□□□□□ -2.03
ARID3AQ99856 7SK.8-201ENST00000612110 250 ntBASIC2.36□□□□□ -2.03
ARID3AQ99856 7SK.11-201ENST00000615477 250 ntBASIC2.36□□□□□ -2.03
ARID3AQ99856 7SK.13-201ENST00000622040 250 ntBASIC2.36□□□□□ -2.03
ARID3AQ99856 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
ARID3AQ99856 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.35□□□□□ -2.03
ARID3AQ99856 SNORA26.6-201ENST00000391256 115 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 211.3 ms