Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 RNU6-1061P-201ENST00000516530 99 ntBASIC1.84□□□□□ -2.11
HAPLN3Q96S86 AC133485.4-201ENST00000561835 220 ntBASIC1.84□□□□□ -2.11
HAPLN3Q96S86 AC138907.4-201ENST00000570107 226 ntBASIC1.84□□□□□ -2.11
HAPLN3Q96S86 MIR4419B-201ENST00000577260 68 ntBASIC1.84□□□□□ -2.11
HAPLN3Q96S86 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HAPLN3Q96S86 AL391516.1-201ENST00000554380 2449 ntBASIC1.83□□□□□ -2.12
HAPLN3Q96S86 RNU6-1123P-201ENST00000362347 106 ntBASIC1.83□□□□□ -2.12
HAPLN3Q96S86 RNU6-834P-201ENST00000362367 110 ntBASIC1.83□□□□□ -2.12
HAPLN3Q96S86 RNU6-647P-201ENST00000364243 107 ntBASIC1.83□□□□□ -2.12
HAPLN3Q96S86 RNU6-1325P-201ENST00000364905 105 ntBASIC1.83□□□□□ -2.12
HAPLN3Q96S86 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
HAPLN3Q96S86 AP003484.1-201ENST00000530974 250 ntBASIC1.83□□□□□ -2.12
HAPLN3Q96S86 AL096840.1-201ENST00000603287 93 ntBASIC1.83□□□□□ -2.12
HAPLN3Q96S86 AL627230.6-201ENST00000611129 280 ntBASIC1.83□□□□□ -2.12
HAPLN3Q96S86 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HAPLN3Q96S86 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HAPLN3Q96S86 MIR424-201ENST00000362227 98 ntBASIC1.82□□□□□ -2.12
HAPLN3Q96S86 RNU6-414P-201ENST00000363705 104 ntBASIC1.82□□□□□ -2.12
HAPLN3Q96S86 SNORD38C-201ENST00000384381 69 ntBASIC1.82□□□□□ -2.12
HAPLN3Q96S86 MIR676-201ENST00000390702 67 ntBASIC1.82□□□□□ -2.12
HAPLN3Q96S86 JTBP1-201ENST00000441314 247 ntBASIC1.82□□□□□ -2.12
HAPLN3Q96S86 AC087499.4-201ENST00000448505 178 ntBASIC1.82□□□□□ -2.12
HAPLN3Q96S86 SNORD33.1-201ENST00000516213 88 ntBASIC1.82□□□□□ -2.12
HAPLN3Q96S86 SNORA25.15-201ENST00000516487 89 ntBASIC1.82□□□□□ -2.12
HAPLN3Q96S86 AC024614.2-201ENST00000577584 372 ntBASIC1.82□□□□□ -2.12
HAPLN3Q96S86 AC084768.2-201ENST00000622736 221 ntBASIC1.82□□□□□ -2.12
HAPLN3Q96S86 SNORD48-201ENST00000364953 64 ntBASIC1.81□□□□□ -2.12
HAPLN3Q96S86 RNU6-44P-201ENST00000384045 107 ntBASIC1.81□□□□□ -2.12
HAPLN3Q96S86 RNU6-1144P-201ENST00000384247 104 ntBASIC1.81□□□□□ -2.12
HAPLN3Q96S86 MIR194-1-201ENST00000384892 85 ntBASIC1.81□□□□□ -2.12
HAPLN3Q96S86 MIR516B2-201ENST00000385190 85 ntBASIC1.81□□□□□ -2.12
HAPLN3Q96S86 MIR660-201ENST00000385235 97 ntBASIC1.81□□□□□ -2.12
HAPLN3Q96S86 RNU6-1064P-201ENST00000410626 104 ntBASIC1.81□□□□□ -2.12
HAPLN3Q96S86 RPS26P48-201ENST00000491713 339 ntBASIC1.81□□□□□ -2.12
HAPLN3Q96S86 RNU6-1053P-201ENST00000515930 101 ntBASIC1.81□□□□□ -2.12
HAPLN3Q96S86 SNORA31.4-201ENST00000516049 129 ntBASIC1.81□□□□□ -2.12
HAPLN3Q96S86 RNU7-181P-201ENST00000517234 74 ntBASIC1.81□□□□□ -2.12
HAPLN3Q96S86 MIR4778-201ENST00000577635 80 ntBASIC1.81□□□□□ -2.12
HAPLN3Q96S86 MIR4255-201ENST00000579351 72 ntBASIC1.81□□□□□ -2.12
HAPLN3Q96S86 MIR3618-201ENST00000580330 88 ntBASIC1.81□□□□□ -2.12
HAPLN3Q96S86 MIR6129-201ENST00000616087 109 ntBASIC1.81□□□□□ -2.12
HAPLN3Q96S86 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.81□□□□□ -2.12
HAPLN3Q96S86 RNU6-349P-201ENST00000362402 107 ntBASIC1.8□□□□□ -2.12
HAPLN3Q96S86 Y_RNA.366-201ENST00000365540 102 ntBASIC1.8□□□□□ -2.12
HAPLN3Q96S86 RNU6-1056P-201ENST00000383996 107 ntBASIC1.8□□□□□ -2.12
HAPLN3Q96S86 MIR526A1-201ENST00000384897 85 ntBASIC1.8□□□□□ -2.12
HAPLN3Q96S86 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.8□□□□□ -2.12
HAPLN3Q96S86 RNU6-250P-201ENST00000516958 103 ntBASIC1.8□□□□□ -2.12
HAPLN3Q96S86 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.8□□□□□ -2.12
HAPLN3Q96S86 MIR4498-201ENST00000577599 66 ntBASIC1.8□□□□□ -2.12
HAPLN3Q96S86 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.8□□□□□ -2.12
HAPLN3Q96S86 RNU6-203P-201ENST00000384038 104 ntBASIC1.79□□□□□ -2.12
HAPLN3Q96S86 RNU6-476P-201ENST00000384726 107 ntBASIC1.79□□□□□ -2.12
HAPLN3Q96S86 U8.17-201ENST00000391292 132 ntBASIC1.79□□□□□ -2.12
HAPLN3Q96S86 AC004965.1-201ENST00000413033 213 ntBASIC1.79□□□□□ -2.12
HAPLN3Q96S86 AL161935.2-201ENST00000414627 60 ntBASIC1.79□□□□□ -2.12
HAPLN3Q96S86 AL035461.1-201ENST00000421490 332 ntBASIC1.79□□□□□ -2.12
HAPLN3Q96S86 RNU6-240P-201ENST00000516098 97 ntBASIC1.79□□□□□ -2.12
HAPLN3Q96S86 RNU6-113P-201ENST00000516653 101 ntBASIC1.79□□□□□ -2.12
HAPLN3Q96S86 RNU6-919P-201ENST00000516731 104 ntBASIC1.79□□□□□ -2.12
HAPLN3Q96S86 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.79□□□□□ -2.12
HAPLN3Q96S86 HSPE1P19-201ENST00000603327 295 ntBASIC1.79□□□□□ -2.12
HAPLN3Q96S86 SNORD3E-202ENST00000627253 216 ntBASIC1.79□□□□□ -2.12
HAPLN3Q96S86 U6.95-201ENST00000636931 70 ntBASIC1.79□□□□□ -2.12
HAPLN3Q96S86 RNU6-457P-201ENST00000363999 107 ntBASIC1.78□□□□□ -2.12
HAPLN3Q96S86 Y_RNA.351-201ENST00000365436 96 ntBASIC1.78□□□□□ -2.12
HAPLN3Q96S86 MIR1263-201ENST00000408324 86 ntBASIC1.78□□□□□ -2.12
HAPLN3Q96S86 MIR1267-201ENST00000408723 78 ntBASIC1.78□□□□□ -2.12
HAPLN3Q96S86 RNA5SP247-201ENST00000411181 105 ntBASIC1.78□□□□□ -2.12
HAPLN3Q96S86 SNORA18.7-201ENST00000516910 131 ntBASIC1.78□□□□□ -2.12
HAPLN3Q96S86 MTND5P34-201ENST00000568888 325 ntBASIC1.78□□□□□ -2.12
HAPLN3Q96S86 AC103810.8-201ENST00000607347 118 ntBASIC1.78□□□□□ -2.12
HAPLN3Q96S86 AC025166.1-201ENST00000612411 163 ntBASIC1.78□□□□□ -2.12
HAPLN3Q96S86 MIR8074-201ENST00000615081 81 ntBASIC1.78□□□□□ -2.12
HAPLN3Q96S86 MTND5P18-201ENST00000445624 1801 ntBASIC1.77□□□□□ -2.13
HAPLN3Q96S86 MIR337-201ENST00000362281 93 ntBASIC1.77□□□□□ -2.13
HAPLN3Q96S86 Y_RNA.241-201ENST00000364470 117 ntBASIC1.77□□□□□ -2.13
HAPLN3Q96S86 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.77□□□□□ -2.13
HAPLN3Q96S86 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HAPLN3Q96S86 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HAPLN3Q96S86 RNY4P18-201ENST00000391107 89 ntBASIC1.77□□□□□ -2.13
HAPLN3Q96S86 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.77□□□□□ -2.13
HAPLN3Q96S86 SNORA44.1-201ENST00000517031 108 ntBASIC1.77□□□□□ -2.13
HAPLN3Q96S86 SNORA77B-201ENST00000578179 125 ntBASIC1.77□□□□□ -2.13
HAPLN3Q96S86 MIR3683-201ENST00000580847 82 ntBASIC1.77□□□□□ -2.13
HAPLN3Q96S86 AL137067.1-201ENST00000615933 120 ntBASIC1.77□□□□□ -2.13
HAPLN3Q96S86 AC091932.4-201ENST00000623386 200 ntBASIC1.77□□□□□ -2.13
HAPLN3Q96S86 AC095038.3-201ENST00000634439 195 ntBASIC1.77□□□□□ -2.13
HAPLN3Q96S86 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HAPLN3Q96S86 MIR378A-201ENST00000362177 66 ntBASIC1.76□□□□□ -2.13
HAPLN3Q96S86 Y_RNA.4-201ENST00000362333 112 ntBASIC1.76□□□□□ -2.13
HAPLN3Q96S86 RNA5SP190-201ENST00000365222 118 ntBASIC1.76□□□□□ -2.13
HAPLN3Q96S86 RNU6-439P-201ENST00000384188 106 ntBASIC1.76□□□□□ -2.13
HAPLN3Q96S86 SNORA27-201ENST00000384323 126 ntBASIC1.76□□□□□ -2.13
HAPLN3Q96S86 MIR452-201ENST00000385020 85 ntBASIC1.76□□□□□ -2.13
HAPLN3Q96S86 SNORD28B-201ENST00000390993 75 ntBASIC1.76□□□□□ -2.13
HAPLN3Q96S86 SNORA67.5-201ENST00000391036 107 ntBASIC1.76□□□□□ -2.13
HAPLN3Q96S86 AC108667.1-201ENST00000428618 249 ntBASIC1.76□□□□□ -2.13
HAPLN3Q96S86 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.76□□□□□ -2.13
HAPLN3Q96S86 MIR502-201ENST00000606349 86 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 162 ms