Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 UBE2V2P2-201ENST00000587677 504 ntBASIC-3.3□□□□□ -2.94
VPS13AQ96RL7 RNU6-20P-201ENST00000384106 107 ntBASIC-3.3□□□□□ -2.94
VPS13AQ96RL7 RNU6-767P-201ENST00000384132 107 ntBASIC-3.3□□□□□ -2.94
VPS13AQ96RL7 AC004386.2-201ENST00000441858 148 ntBASIC-3.3□□□□□ -2.94
VPS13AQ96RL7 AC087752.4-201ENST00000605911 462 ntBASIC-3.3□□□□□ -2.94
VPS13AQ96RL7 RNU4-22P-201ENST00000411058 166 ntBASIC-3.3□□□□□ -2.94
VPS13AQ96RL7 MTND2P22-201ENST00000444325 1033 ntBASIC-3.3□□□□□ -2.94
VPS13AQ96RL7 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-3.3□□□□□ -2.94
VPS13AQ96RL7 AC023158.2-201ENST00000614876 543 ntBASIC-3.3□□□□□ -2.94
VPS13AQ96RL7 SNORD50B-201ENST00000364995 70 ntBASIC-3.31□□□□□ -2.94
VPS13AQ96RL7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-3.31□□□□□ -2.94
VPS13AQ96RL7 RNU6-1245P-201ENST00000411130 106 ntBASIC-3.31□□□□□ -2.94
VPS13AQ96RL7 AF228730.4-201ENST00000421457 183 ntBASIC-3.31□□□□□ -2.94
VPS13AQ96RL7 RBMX2P4-201ENST00000441256 376 ntBASIC-3.31□□□□□ -2.94
VPS13AQ96RL7 AL669831.3-213ENST00000636676 183 ntBASIC-3.31□□□□□ -2.94
VPS13AQ96RL7 SNORA75B-201ENST00000384053 137 ntBASIC-3.31□□□□□ -2.94
VPS13AQ96RL7 RNU6-1215P-201ENST00000384441 102 ntBASIC-3.32□□□□□ -2.94
VPS13AQ96RL7 Y_RNA.517-201ENST00000384551 106 ntBASIC-3.32□□□□□ -2.94
VPS13AQ96RL7 MIR216B-201ENST00000390186 82 ntBASIC-3.32□□□□□ -2.94
VPS13AQ96RL7 RNU6-630P-201ENST00000391258 106 ntBASIC-3.32□□□□□ -2.94
VPS13AQ96RL7 MTND4P25-201ENST00000441039 533 ntBASIC-3.32□□□□□ -2.94
VPS13AQ96RL7 Y_RNA.797-201ENST00000515977 94 ntBASIC-3.32□□□□□ -2.94
VPS13AQ96RL7 AC005972.2-201ENST00000604690 348 ntBASIC-3.32□□□□□ -2.94
VPS13AQ96RL7 RNU6-132P-201ENST00000383863 107 ntBASIC-3.32□□□□□ -2.94
VPS13AQ96RL7 MRPS10P1-201ENST00000448483 130 ntBASIC-3.32□□□□□ -2.94
VPS13AQ96RL7 SCARNA24.2-201ENST00000516968 130 ntBASIC-3.32□□□□□ -2.94
VPS13AQ96RL7 MIR548AC-201ENST00000585049 88 ntBASIC-3.32□□□□□ -2.94
VPS13AQ96RL7 SNORD115-5-201ENST00000363633 82 ntBASIC-3.33□□□□□ -2.94
VPS13AQ96RL7 Y_RNA.157-201ENST00000363638 102 ntBASIC-3.33□□□□□ -2.94
VPS13AQ96RL7 RNU6-647P-201ENST00000364243 107 ntBASIC-3.33□□□□□ -2.94
VPS13AQ96RL7 SNORA63.6-201ENST00000364921 119 ntBASIC-3.33□□□□□ -2.94
VPS13AQ96RL7 SNORD115-1-201ENST00000364961 82 ntBASIC-3.33□□□□□ -2.94
VPS13AQ96RL7 AC124312.5-201ENST00000604451 268 ntBASIC-3.33□□□□□ -2.94
VPS13AQ96RL7 AC027807.2-201ENST00000616099 408 ntBASIC-3.33□□□□□ -2.94
VPS13AQ96RL7 EEF1E1P1-201ENST00000446998 430 ntBASIC-3.33□□□□□ -2.94
VPS13AQ96RL7 RNU7-53P-201ENST00000516705 60 ntBASIC-3.33□□□□□ -2.94
VPS13AQ96RL7 SNORD14E-201ENST00000364009 85 ntBASIC-3.33□□□□□ -2.94
VPS13AQ96RL7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-3.34□□□□□ -2.94
VPS13AQ96RL7 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-3.34□□□□□ -2.94
VPS13AQ96RL7 RNU6-214P-201ENST00000384130 107 ntBASIC-3.34□□□□□ -2.94
VPS13AQ96RL7 AC022616.6-201ENST00000520479 119 ntBASIC-3.34□□□□□ -2.94
VPS13AQ96RL7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-3.35□□□□□ -2.94
VPS13AQ96RL7 SNORD115-37-201ENST00000363768 82 ntBASIC-3.35□□□□□ -2.95
VPS13AQ96RL7 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-3.35□□□□□ -2.95
VPS13AQ96RL7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-3.35□□□□□ -2.95
VPS13AQ96RL7 U6.97-201ENST00000636904 101 ntBASIC-3.35□□□□□ -2.95
VPS13AQ96RL7 Y_RNA.344-201ENST00000365381 112 ntBASIC-3.36□□□□□ -2.95
VPS13AQ96RL7 Y_RNA.690-201ENST00000516603 95 ntBASIC-3.36□□□□□ -2.95
VPS13AQ96RL7 MTND2P32-201ENST00000521584 1038 ntBASIC-3.36□□□□□ -2.95
VPS13AQ96RL7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-3.36□□□□□ -2.95
VPS13AQ96RL7 AC019178.2-201ENST00000423595 505 ntBASIC-3.36□□□□□ -2.95
VPS13AQ96RL7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-3.36□□□□□ -2.95
VPS13AQ96RL7 MIR548O2-201ENST00000616090 70 ntBASIC-3.36□□□□□ -2.95
VPS13AQ96RL7 Y_RNA.279-201ENST00000364763 95 ntBASIC-3.37□□□□□ -2.95
VPS13AQ96RL7 RNU6-637P-201ENST00000384050 107 ntBASIC-3.37□□□□□ -2.95
VPS13AQ96RL7 RNU7-88P-201ENST00000458752 63 ntBASIC-3.37□□□□□ -2.95
VPS13AQ96RL7 SNORA43.2-201ENST00000516652 128 ntBASIC-3.37□□□□□ -2.95
VPS13AQ96RL7 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-3.37□□□□□ -2.95
VPS13AQ96RL7 AC078880.5-201ENST00000617845 421 ntBASIC-3.37□□□□□ -2.95
VPS13AQ96RL7 AC092608.3-201ENST00000625017 386 ntBASIC-3.37□□□□□ -2.95
VPS13AQ96RL7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-3.37□□□□□ -2.95
VPS13AQ96RL7 RNU6-1281P-201ENST00000516223 105 ntBASIC-3.37□□□□□ -2.95
VPS13AQ96RL7 RNU6-1214P-201ENST00000363650 109 ntBASIC-3.37□□□□□ -2.95
VPS13AQ96RL7 RNU4-75P-201ENST00000364621 146 ntBASIC-3.37□□□□□ -2.95
VPS13AQ96RL7 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-3.37□□□□□ -2.95
VPS13AQ96RL7 ACA59.1-201ENST00000515966 143 ntBASIC-3.37□□□□□ -2.95
VPS13AQ96RL7 RNU6-344P-201ENST00000516635 111 ntBASIC-3.37□□□□□ -2.95
VPS13AQ96RL7 AC006435.5-201ENST00000624486 112 ntBASIC-3.37□□□□□ -2.95
VPS13AQ96RL7 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.38□□□□□ -2.95
VPS13AQ96RL7 AC023449.1-201ENST00000454464 154 ntBASIC-3.38□□□□□ -2.95
VPS13AQ96RL7 PISRT1.1-201ENST00000616930 107 ntBASIC-3.38□□□□□ -2.95
VPS13AQ96RL7 RNU6-552P-201ENST00000362869 119 ntBASIC-3.38□□□□□ -2.95
VPS13AQ96RL7 MIR519A2-201ENST00000384990 87 ntBASIC-3.38□□□□□ -2.95
VPS13AQ96RL7 RNU5E-7P-201ENST00000365290 117 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 MTCO2P27-201ENST00000420740 428 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 VN1R10P-201ENST00000447106 875 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 RNU6-1161P-201ENST00000516176 102 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 RNU6-1012P-201ENST00000516606 109 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 FRG2DP-202ENST00000566967 323 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 AL078596.1-201ENST00000624856 447 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 RNU6-386P-201ENST00000362650 107 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 RNU6-223P-201ENST00000362830 107 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 Y_RNA.169-201ENST00000363745 96 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 SNORA15B-2-201ENST00000384058 135 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 SNORA15B-1-201ENST00000384334 135 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 SNORD65B-201ENST00000459126 73 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 HIF1AP1-201ENST00000553642 175 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 AC104072.1-201ENST00000568817 668 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 MIR3646-201ENST00000578301 84 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 SNORD18C-201ENST00000362704 69 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 RNU1-115P-201ENST00000365329 160 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 RNU6-106P-201ENST00000384405 107 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 TUSC7.1-201ENST00000610969 165 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 AC013734.1-201ENST00000619329 111 ntBASIC-3.39□□□□□ -2.95
VPS13AQ96RL7 Y_RNA.47-201ENST00000362697 108 ntBASIC-3.4□□□□□ -2.95
VPS13AQ96RL7 Y_RNA.188-201ENST00000363952 111 ntBASIC-3.4□□□□□ -2.95
VPS13AQ96RL7 RNU6-266P-201ENST00000364225 107 ntBASIC-3.4□□□□□ -2.95
VPS13AQ96RL7 RNU6-609P-201ENST00000365459 107 ntBASIC-3.4□□□□□ -2.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms