Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RNU4-62P-201ENST00000410125 130 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 AC067940.1-201ENST00000458411 300 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 UBL5P1-201ENST00000507979 193 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 RNY3P16-201ENST00000516338 101 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 MIR548AO-201ENST00000579992 96 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 MIR4661-201ENST00000582720 75 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 MIR3660-201ENST00000584845 100 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.05□□□□□ -2.24
NR1H4Q96RI1 AP000753.3-201ENST00000604083 169 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 AL512598.1-201ENST00000610158 273 ntBASIC1.05□□□□□ -2.24
NR1H4Q96RI1 RNU6-923P-201ENST00000364753 107 ntBASIC1.04□□□□□ -2.24
NR1H4Q96RI1 SNORA24-201ENST00000384096 131 ntBASIC1.04□□□□□ -2.24
NR1H4Q96RI1 Y_RNA.489-201ENST00000384410 101 ntBASIC1.04□□□□□ -2.24
NR1H4Q96RI1 RNU4-70P-201ENST00000384579 139 ntBASIC1.04□□□□□ -2.24
NR1H4Q96RI1 SNORA2B-201ENST00000384583 137 ntBASIC1.04□□□□□ -2.24
NR1H4Q96RI1 RNU6-613P-201ENST00000410412 108 ntBASIC1.04□□□□□ -2.24
NR1H4Q96RI1 RNU6-994P-201ENST00000410507 111 ntBASIC1.04□□□□□ -2.24
NR1H4Q96RI1 RNU6-938P-201ENST00000411285 103 ntBASIC1.04□□□□□ -2.24
NR1H4Q96RI1 SNORD36C-201ENST00000516733 66 ntBASIC1.04□□□□□ -2.24
NR1H4Q96RI1 RNU2-4P-201ENST00000606190 192 ntBASIC1.04□□□□□ -2.24
NR1H4Q96RI1 MIR6516-201ENST00000630554 81 ntBASIC1.04□□□□□ -2.24
NR1H4Q96RI1 Y_RNA.238-201ENST00000364441 102 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 SNORD113.3-201ENST00000364630 78 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 Y_RNA.542-201ENST00000384641 111 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 RNU6-578P-201ENST00000390980 103 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 MIR1302-7-201ENST00000408841 72 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 RNU4-43P-201ENST00000410628 137 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 AL035398.1-201ENST00000430869 322 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 AF228730.3-201ENST00000436691 102 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.03□□□□□ -2.24
NR1H4Q96RI1 RNU7-96P-201ENST00000459535 64 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 RPL39P28-201ENST00000465655 155 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 PDCD5P2-201ENST00000507570 312 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 AC108729.3-201ENST00000513484 108 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 RNU6-111P-201ENST00000517179 105 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.03□□□□□ -2.24
NR1H4Q96RI1 MIR4421-201ENST00000578133 69 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 AC131055.1-201ENST00000584626 316 ntBASIC1.03□□□□□ -2.24
NR1H4Q96RI1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
NR1H4Q96RI1 SNORA7.1-201ENST00000363750 139 ntBASIC1.02□□□□□ -2.25
NR1H4Q96RI1 Y_RNA.618-201ENST00000410949 107 ntBASIC1.02□□□□□ -2.25
NR1H4Q96RI1 BTF3P4-201ENST00000418852 495 ntBASIC1.02□□□□□ -2.25
NR1H4Q96RI1 RNU7-73P-201ENST00000458743 63 ntBASIC1.02□□□□□ -2.25
NR1H4Q96RI1 RNU6-561P-201ENST00000516222 102 ntBASIC1.02□□□□□ -2.25
NR1H4Q96RI1 SNORD116-25-201ENST00000516517 92 ntBASIC1.02□□□□□ -2.25
NR1H4Q96RI1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
NR1H4Q96RI1 AC108706.1-201ENST00000611053 297 ntBASIC1.02□□□□□ -2.25
NR1H4Q96RI1 AC106800.4-201ENST00000614905 153 ntBASIC1.02□□□□□ -2.25
NR1H4Q96RI1 Y_RNA.23-201ENST00000362496 106 ntBASIC1.01□□□□□ -2.25
NR1H4Q96RI1 Y_RNA.182-201ENST00000363880 111 ntBASIC1.01□□□□□ -2.25
NR1H4Q96RI1 Y_RNA.494-201ENST00000384432 111 ntBASIC1.01□□□□□ -2.25
NR1H4Q96RI1 Y_RNA.571-201ENST00000384753 98 ntBASIC1.01□□□□□ -2.25
NR1H4Q96RI1 MT-TN-201ENST00000387400 73 ntBASIC1.01□□□□□ -2.25
NR1H4Q96RI1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.01□□□□□ -2.25
NR1H4Q96RI1 Y_RNA.680-201ENST00000516441 93 ntBASIC1.01□□□□□ -2.25
NR1H4Q96RI1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.01□□□□□ -2.25
NR1H4Q96RI1 AL157834.3-201ENST00000615543 103 ntBASIC1.01□□□□□ -2.25
NR1H4Q96RI1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.01□□□□□ -2.25
NR1H4Q96RI1 MIR302B-201ENST00000362188 73 ntBASIC1□□□□□ -2.25
NR1H4Q96RI1 Y_RNA.200-201ENST00000364018 102 ntBASIC1□□□□□ -2.25
NR1H4Q96RI1 RNU6-654P-201ENST00000364373 107 ntBASIC1□□□□□ -2.25
NR1H4Q96RI1 AL603825.1-201ENST00000438481 80 ntBASIC1□□□□□ -2.25
NR1H4Q96RI1 RNU7-95P-201ENST00000459222 64 ntBASIC1□□□□□ -2.25
NR1H4Q96RI1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1□□□□□ -2.25
NR1H4Q96RI1 AC036111.3-201ENST00000526389 112 ntBASIC1□□□□□ -2.25
NR1H4Q96RI1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1□□□□□ -2.25
NR1H4Q96RI1 MIR3129-201ENST00000581095 76 ntBASIC1□□□□□ -2.25
NR1H4Q96RI1 MIR377-201ENST00000362145 69 ntBASIC0.99□□□□□ -2.25
NR1H4Q96RI1 MIR342-201ENST00000362212 99 ntBASIC0.99□□□□□ -2.25
NR1H4Q96RI1 Y_RNA.168-201ENST00000363740 102 ntBASIC0.99□□□□□ -2.25
NR1H4Q96RI1 Y_RNA.401-201ENST00000383965 117 ntBASIC0.99□□□□□ -2.25
NR1H4Q96RI1 SNORA1-201ENST00000384107 130 ntBASIC0.99□□□□□ -2.25
NR1H4Q96RI1 SNORD77.3-201ENST00000391113 65 ntBASIC0.99□□□□□ -2.25
NR1H4Q96RI1 POLR2J4-204ENST00000418424 324 ntBASIC0.99□□□□□ -2.25
NR1H4Q96RI1 AL138752.1-201ENST00000452964 351 ntBASIC0.99□□□□□ -2.25
NR1H4Q96RI1 MIR378D2-201ENST00000580636 98 ntBASIC0.99□□□□□ -2.25
NR1H4Q96RI1 MIR4264-201ENST00000583520 66 ntBASIC0.99□□□□□ -2.25
NR1H4Q96RI1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.99□□□□□ -2.25
NR1H4Q96RI1 Z83818.1-201ENST00000603584 150 ntBASIC0.99□□□□□ -2.25
NR1H4Q96RI1 snoU13.31-201ENST00000607291 104 ntBASIC0.99□□□□□ -2.25
NR1H4Q96RI1 AL136317.1-201ENST00000612653 226 ntBASIC0.99□□□□□ -2.25
NR1H4Q96RI1 Y_RNA.83-201ENST00000363005 113 ntBASIC0.98□□□□□ -2.25
NR1H4Q96RI1 RNY1-201ENST00000364228 113 ntBASIC0.98□□□□□ -2.25
NR1H4Q96RI1 Y_RNA.440-201ENST00000384120 114 ntBASIC0.98□□□□□ -2.25
NR1H4Q96RI1 Y_RNA.454-201ENST00000384224 113 ntBASIC0.98□□□□□ -2.25
NR1H4Q96RI1 SNORD38B-201ENST00000384690 67 ntBASIC0.98□□□□□ -2.25
NR1H4Q96RI1 RNA5SP95-201ENST00000410319 137 ntBASIC0.98□□□□□ -2.25
NR1H4Q96RI1 AP1B1P2-201ENST00000416196 106 ntBASIC0.98□□□□□ -2.25
NR1H4Q96RI1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.98□□□□□ -2.25
NR1H4Q96RI1 RNU2-11P-201ENST00000459191 187 ntBASIC0.98□□□□□ -2.25
NR1H4Q96RI1 RNU7-80P-201ENST00000459562 61 ntBASIC0.98□□□□□ -2.25
NR1H4Q96RI1 RNU6-998P-201ENST00000515894 101 ntBASIC0.98□□□□□ -2.25
NR1H4Q96RI1 MIR4308-201ENST00000580634 81 ntBASIC0.98□□□□□ -2.25
NR1H4Q96RI1 AL353770.2-201ENST00000620024 78 ntBASIC0.98□□□□□ -2.25
NR1H4Q96RI1 SNORD38B-202ENST00000625943 69 ntBASIC0.98□□□□□ -2.25
NR1H4Q96RI1 SNORA1.1-201ENST00000364671 133 ntBASIC0.97□□□□□ -2.25
NR1H4Q96RI1 RNU6-275P-201ENST00000364910 107 ntBASIC0.97□□□□□ -2.25
NR1H4Q96RI1 RNU6-1292P-201ENST00000383856 107 ntBASIC0.97□□□□□ -2.25
NR1H4Q96RI1 RNU6-643P-201ENST00000384018 107 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms