Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 SNORD115-15-201ENST00000364809 81 ntBASIC1.84□□□□□ -2.11
ACAP3Q96P50 SNORD115-1-201ENST00000364961 82 ntBASIC1.84□□□□□ -2.11
ACAP3Q96P50 SNORD115-26-201ENST00000365067 82 ntBASIC1.84□□□□□ -2.11
ACAP3Q96P50 SNORD115-10-201ENST00000365073 81 ntBASIC1.84□□□□□ -2.11
ACAP3Q96P50 SNORD115-43-201ENST00000365503 82 ntBASIC1.84□□□□□ -2.11
ACAP3Q96P50 SNORD115-36-201ENST00000365629 82 ntBASIC1.84□□□□□ -2.11
ACAP3Q96P50 MIR520C-201ENST00000385005 87 ntBASIC1.84□□□□□ -2.11
ACAP3Q96P50 RNU4-61P-201ENST00000411243 107 ntBASIC1.84□□□□□ -2.11
ACAP3Q96P50 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.84□□□□□ -2.11
ACAP3Q96P50 AC008834.1-201ENST00000511612 175 ntBASIC1.84□□□□□ -2.11
ACAP3Q96P50 Y_RNA.686-201ENST00000516548 134 ntBASIC1.84□□□□□ -2.11
ACAP3Q96P50 AP001328.1-201ENST00000528550 176 ntBASIC1.84□□□□□ -2.11
ACAP3Q96P50 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.84□□□□□ -2.11
ACAP3Q96P50 AL513534.2-201ENST00000603836 250 ntBASIC1.84□□□□□ -2.11
ACAP3Q96P50 AP001485.1-201ENST00000604799 199 ntBASIC1.84□□□□□ -2.11
ACAP3Q96P50 SNORD115-40-201ENST00000606510 82 ntBASIC1.84□□□□□ -2.11
ACAP3Q96P50 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.83□□□□□ -2.12
ACAP3Q96P50 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.83□□□□□ -2.12
ACAP3Q96P50 MIR302D-201ENST00000362275 68 ntBASIC1.83□□□□□ -2.12
ACAP3Q96P50 Y_RNA.4-201ENST00000362333 112 ntBASIC1.83□□□□□ -2.12
ACAP3Q96P50 RNU6-704P-201ENST00000364162 103 ntBASIC1.83□□□□□ -2.12
ACAP3Q96P50 SNORD41-201ENST00000386967 70 ntBASIC1.83□□□□□ -2.12
ACAP3Q96P50 RNU5E-3P-201ENST00000515913 68 ntBASIC1.83□□□□□ -2.12
ACAP3Q96P50 SNORD111.1-201ENST00000516421 86 ntBASIC1.83□□□□□ -2.12
ACAP3Q96P50 AC024614.2-201ENST00000577584 372 ntBASIC1.83□□□□□ -2.12
ACAP3Q96P50 MIR4764-201ENST00000580680 88 ntBASIC1.83□□□□□ -2.12
ACAP3Q96P50 Y_RNA.351-201ENST00000365436 96 ntBASIC1.82□□□□□ -2.12
ACAP3Q96P50 RNU6-1067P-201ENST00000384752 107 ntBASIC1.82□□□□□ -2.12
ACAP3Q96P50 RNU7-67P-201ENST00000459003 62 ntBASIC1.82□□□□□ -2.12
ACAP3Q96P50 AC108729.3-201ENST00000513484 108 ntBASIC1.82□□□□□ -2.12
ACAP3Q96P50 RNU6-947P-201ENST00000516264 106 ntBASIC1.82□□□□□ -2.12
ACAP3Q96P50 RNU7-43P-201ENST00000516554 64 ntBASIC1.82□□□□□ -2.12
ACAP3Q96P50 SCARNA15-202ENST00000516881 127 ntBASIC1.82□□□□□ -2.12
ACAP3Q96P50 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.82□□□□□ -2.12
ACAP3Q96P50 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
ACAP3Q96P50 SNORD33-201ENST00000362761 85 ntBASIC1.81□□□□□ -2.12
ACAP3Q96P50 Y_RNA.120-201ENST00000363304 110 ntBASIC1.81□□□□□ -2.12
ACAP3Q96P50 SNORD50.2-201ENST00000365465 70 ntBASIC1.81□□□□□ -2.12
ACAP3Q96P50 RNU6-1065P-201ENST00000384513 106 ntBASIC1.81□□□□□ -2.12
ACAP3Q96P50 SNORA40-201ENST00000388090 126 ntBASIC1.81□□□□□ -2.12
ACAP3Q96P50 RNU6-257P-201ENST00000410238 98 ntBASIC1.81□□□□□ -2.12
ACAP3Q96P50 MTATP6P21-201ENST00000440681 189 ntBASIC1.81□□□□□ -2.12
ACAP3Q96P50 AL392103.1-201ENST00000447000 198 ntBASIC1.81□□□□□ -2.12
ACAP3Q96P50 RPS29P24-201ENST00000486345 171 ntBASIC1.81□□□□□ -2.12
ACAP3Q96P50 Y_RNA.690-201ENST00000516603 95 ntBASIC1.81□□□□□ -2.12
ACAP3Q96P50 RNU2-60P-201ENST00000517290 128 ntBASIC1.81□□□□□ -2.12
ACAP3Q96P50 MIR4498-201ENST00000577599 66 ntBASIC1.81□□□□□ -2.12
ACAP3Q96P50 AL596211.1-201ENST00000569873 2277 ntBASIC1.8□□□□□ -2.12
ACAP3Q96P50 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
ACAP3Q96P50 SNORD48-201ENST00000364953 64 ntBASIC1.8□□□□□ -2.12
ACAP3Q96P50 MTND4LP9-201ENST00000427694 174 ntBASIC1.8□□□□□ -2.12
ACAP3Q96P50 TMSB4XP3-201ENST00000445144 114 ntBASIC1.8□□□□□ -2.12
ACAP3Q96P50 RNU6-958P-201ENST00000516995 106 ntBASIC1.8□□□□□ -2.12
ACAP3Q96P50 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.8□□□□□ -2.12
ACAP3Q96P50 AL357312.1-201ENST00000603879 298 ntBASIC1.8□□□□□ -2.12
ACAP3Q96P50 MIR4791-201ENST00000607666 84 ntBASIC1.8□□□□□ -2.12
ACAP3Q96P50 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.8□□□□□ -2.12
ACAP3Q96P50 GHRLOS.1-201ENST00000610995 70 ntBASIC1.8□□□□□ -2.12
ACAP3Q96P50 AC011603.4-201ENST00000611325 277 ntBASIC1.8□□□□□ -2.12
ACAP3Q96P50 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
ACAP3Q96P50 MIR378A-201ENST00000362177 66 ntBASIC1.79□□□□□ -2.12
ACAP3Q96P50 RNU6-508P-201ENST00000363231 103 ntBASIC1.79□□□□□ -2.12
ACAP3Q96P50 SNORA70.7-201ENST00000384159 133 ntBASIC1.79□□□□□ -2.12
ACAP3Q96P50 SNORA51.10-201ENST00000384418 136 ntBASIC1.79□□□□□ -2.12
ACAP3Q96P50 MIR934-201ENST00000401241 83 ntBASIC1.79□□□□□ -2.12
ACAP3Q96P50 BTF3P4-201ENST00000418852 495 ntBASIC1.79□□□□□ -2.12
ACAP3Q96P50 RNU7-96P-201ENST00000459535 64 ntBASIC1.79□□□□□ -2.12
ACAP3Q96P50 RNU7-80P-201ENST00000459562 61 ntBASIC1.79□□□□□ -2.12
ACAP3Q96P50 MIR4303-201ENST00000581299 66 ntBASIC1.79□□□□□ -2.12
ACAP3Q96P50 AC243994.1-201ENST00000618627 109 ntBASIC1.79□□□□□ -2.12
ACAP3Q96P50 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.79□□□□□ -2.12
ACAP3Q96P50 AP001340.1-201ENST00000624405 217 ntBASIC1.79□□□□□ -2.12
ACAP3Q96P50 AC008133.2-201ENST00000624540 351 ntBASIC1.79□□□□□ -2.12
ACAP3Q96P50 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
ACAP3Q96P50 MIR302B-201ENST00000362188 73 ntBASIC1.78□□□□□ -2.12
ACAP3Q96P50 RNU1-133P-201ENST00000364867 167 ntBASIC1.78□□□□□ -2.12
ACAP3Q96P50 RNU4-62P-201ENST00000410125 130 ntBASIC1.78□□□□□ -2.12
ACAP3Q96P50 AC027119.1-201ENST00000440877 241 ntBASIC1.78□□□□□ -2.12
ACAP3Q96P50 RPS29P29-201ENST00000456396 171 ntBASIC1.78□□□□□ -2.12
ACAP3Q96P50 RNU2-11P-201ENST00000459191 187 ntBASIC1.78□□□□□ -2.12
ACAP3Q96P50 RNU7-41P-201ENST00000515917 61 ntBASIC1.78□□□□□ -2.12
ACAP3Q96P50 RNU6-1053P-201ENST00000515930 101 ntBASIC1.78□□□□□ -2.12
ACAP3Q96P50 RNA5SP236-201ENST00000516169 116 ntBASIC1.78□□□□□ -2.12
ACAP3Q96P50 AC091932.4-201ENST00000623386 200 ntBASIC1.78□□□□□ -2.12
ACAP3Q96P50 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.78□□□□□ -2.13
ACAP3Q96P50 RNU6-309P-201ENST00000364573 106 ntBASIC1.77□□□□□ -2.13
ACAP3Q96P50 Y_RNA.454-201ENST00000384224 113 ntBASIC1.77□□□□□ -2.13
ACAP3Q96P50 SNORA67.5-201ENST00000391036 107 ntBASIC1.77□□□□□ -2.13
ACAP3Q96P50 Y_RNA.586-201ENST00000391146 98 ntBASIC1.77□□□□□ -2.13
ACAP3Q96P50 AL035398.1-201ENST00000430869 322 ntBASIC1.77□□□□□ -2.13
ACAP3Q96P50 RNU6-998P-201ENST00000515894 101 ntBASIC1.77□□□□□ -2.13
ACAP3Q96P50 Y_RNA.692-201ENST00000516627 105 ntBASIC1.77□□□□□ -2.13
ACAP3Q96P50 MIR3910-1-201ENST00000580936 111 ntBASIC1.77□□□□□ -2.13
ACAP3Q96P50 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
ACAP3Q96P50 MIR4422-201ENST00000581938 83 ntBASIC1.77□□□□□ -2.13
ACAP3Q96P50 AL022345.2-201ENST00000606307 135 ntBASIC1.77□□□□□ -2.13
ACAP3Q96P50 U7.2-201ENST00000607576 63 ntBASIC1.77□□□□□ -2.13
ACAP3Q96P50 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
ACAP3Q96P50 Y_RNA.294-201ENST00000364916 102 ntBASIC1.76□□□□□ -2.13
ACAP3Q96P50 RNA5SP363-201ENST00000365072 115 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms