Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL357312.1-201ENST00000603879 298 ntBASIC1.6□□□□□ -2.15
CTHRC1Q96CG8 MTND5P32-201ENST00000560711 1802 ntBASIC1.6□□□□□ -2.15
CTHRC1Q96CG8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CTHRC1Q96CG8 RNA5SP99-201ENST00000364020 114 ntBASIC1.59□□□□□ -2.15
CTHRC1Q96CG8 SNORD1A-201ENST00000364968 72 ntBASIC1.59□□□□□ -2.15
CTHRC1Q96CG8 MIR520C-201ENST00000385005 87 ntBASIC1.59□□□□□ -2.15
CTHRC1Q96CG8 AC005908.1-201ENST00000468701 347 ntBASIC1.59□□□□□ -2.15
CTHRC1Q96CG8 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.59□□□□□ -2.15
CTHRC1Q96CG8 Y_RNA.757-201ENST00000578934 114 ntBASIC1.59□□□□□ -2.15
CTHRC1Q96CG8 MIR3910-1-201ENST00000580936 111 ntBASIC1.59□□□□□ -2.15
CTHRC1Q96CG8 AL353997.5-201ENST00000618886 171 ntBASIC1.59□□□□□ -2.15
CTHRC1Q96CG8 U8.1-201ENST00000362843 134 ntBASIC1.58□□□□□ -2.16
CTHRC1Q96CG8 RNU6-1065P-201ENST00000384513 106 ntBASIC1.58□□□□□ -2.16
CTHRC1Q96CG8 AL603914.1-201ENST00000401964 204 ntBASIC1.58□□□□□ -2.16
CTHRC1Q96CG8 RNU6-257P-201ENST00000410238 98 ntBASIC1.58□□□□□ -2.16
CTHRC1Q96CG8 RNU7-67P-201ENST00000459003 62 ntBASIC1.58□□□□□ -2.16
CTHRC1Q96CG8 RPS29P24-201ENST00000486345 171 ntBASIC1.58□□□□□ -2.16
CTHRC1Q96CG8 Y_RNA.690-201ENST00000516603 95 ntBASIC1.58□□□□□ -2.16
CTHRC1Q96CG8 AC090821.2-201ENST00000523552 176 ntBASIC1.58□□□□□ -2.16
CTHRC1Q96CG8 GHRLOS.1-201ENST00000610995 70 ntBASIC1.58□□□□□ -2.16
CTHRC1Q96CG8 AC011603.4-201ENST00000611325 277 ntBASIC1.58□□□□□ -2.16
CTHRC1Q96CG8 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.58□□□□□ -2.16
CTHRC1Q96CG8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CTHRC1Q96CG8 MIR302B-201ENST00000362188 73 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 MIR342-201ENST00000362212 99 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 RNU1-17P-201ENST00000363022 152 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 RNY1P11-201ENST00000363759 113 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 RNU1-133P-201ENST00000364867 167 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 MIR539-201ENST00000365690 78 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 Y_RNA.537-201ENST00000384626 109 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 Y_RNA.586-201ENST00000391146 98 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 MTND4LP9-201ENST00000427694 174 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 AL035398.1-201ENST00000430869 322 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 AL603825.1-201ENST00000438481 80 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 RNU7-96P-201ENST00000459535 64 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 RNA5SP458-201ENST00000516188 119 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 RNU6-922P-201ENST00000516753 99 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 SCARNA15-202ENST00000516881 127 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 MIR3937-201ENST00000580135 106 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 MIR4764-201ENST00000580680 88 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 U7.2-201ENST00000607576 63 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 MIR376A2-201ENST00000636782 80 ntBASIC1.57□□□□□ -2.16
CTHRC1Q96CG8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CTHRC1Q96CG8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CTHRC1Q96CG8 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
CTHRC1Q96CG8 RNU7-53P-201ENST00000516705 60 ntBASIC1.56□□□□□ -2.16
CTHRC1Q96CG8 MIR4422-201ENST00000581938 83 ntBASIC1.56□□□□□ -2.16
CTHRC1Q96CG8 AC132825.6-201ENST00000638861 357 ntBASIC1.56□□□□□ -2.16
CTHRC1Q96CG8 MIR302D-201ENST00000362275 68 ntBASIC1.55□□□□□ -2.16
CTHRC1Q96CG8 Y_RNA.494-201ENST00000384432 111 ntBASIC1.55□□□□□ -2.16
CTHRC1Q96CG8 SNORD28B-201ENST00000390993 75 ntBASIC1.55□□□□□ -2.16
CTHRC1Q96CG8 RNU1-78P-201ENST00000391248 165 ntBASIC1.55□□□□□ -2.16
CTHRC1Q96CG8 RNA5SP247-201ENST00000411181 105 ntBASIC1.55□□□□□ -2.16
CTHRC1Q96CG8 RPS29P29-201ENST00000456396 171 ntBASIC1.55□□□□□ -2.16
CTHRC1Q96CG8 RNU5E-3P-201ENST00000515913 68 ntBASIC1.55□□□□□ -2.16
CTHRC1Q96CG8 SNORA25.15-201ENST00000516487 89 ntBASIC1.55□□□□□ -2.16
CTHRC1Q96CG8 Y_RNA.686-201ENST00000516548 134 ntBASIC1.55□□□□□ -2.16
CTHRC1Q96CG8 RNU6-958P-201ENST00000516995 106 ntBASIC1.55□□□□□ -2.16
CTHRC1Q96CG8 AC019176.1-201ENST00000518519 225 ntBASIC1.55□□□□□ -2.16
CTHRC1Q96CG8 MIR4791-201ENST00000607666 84 ntBASIC1.55□□□□□ -2.16
CTHRC1Q96CG8 MIR8081-201ENST00000611533 95 ntBASIC1.55□□□□□ -2.16
CTHRC1Q96CG8 AC243994.1-201ENST00000618627 109 ntBASIC1.55□□□□□ -2.16
CTHRC1Q96CG8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CTHRC1Q96CG8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.54□□□□□ -2.16
CTHRC1Q96CG8 RNA5SP190-201ENST00000365222 118 ntBASIC1.54□□□□□ -2.16
CTHRC1Q96CG8 SNORA51.10-201ENST00000384418 136 ntBASIC1.54□□□□□ -2.16
CTHRC1Q96CG8 RPL39P39-201ENST00000455840 151 ntBASIC1.54□□□□□ -2.16
CTHRC1Q96CG8 RNU6-1211P-201ENST00000459179 105 ntBASIC1.54□□□□□ -2.16
CTHRC1Q96CG8 RNU6-998P-201ENST00000515894 101 ntBASIC1.54□□□□□ -2.16
CTHRC1Q96CG8 RNU2-13P-201ENST00000515909 113 ntBASIC1.54□□□□□ -2.16
CTHRC1Q96CG8 RNU6-113P-201ENST00000516653 101 ntBASIC1.54□□□□□ -2.16
CTHRC1Q96CG8 MIR3121-201ENST00000579680 77 ntBASIC1.54□□□□□ -2.16
CTHRC1Q96CG8 AL022345.2-201ENST00000606307 135 ntBASIC1.54□□□□□ -2.16
CTHRC1Q96CG8 AL596211.1-201ENST00000569873 2277 ntBASIC1.54□□□□□ -2.16
CTHRC1Q96CG8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CTHRC1Q96CG8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CTHRC1Q96CG8 RNU6-309P-201ENST00000364573 106 ntBASIC1.53□□□□□ -2.16
CTHRC1Q96CG8 RNU6-81P-201ENST00000365608 104 ntBASIC1.53□□□□□ -2.16
CTHRC1Q96CG8 AC027119.1-201ENST00000440877 241 ntBASIC1.53□□□□□ -2.16
CTHRC1Q96CG8 RNU2-11P-201ENST00000459191 187 ntBASIC1.53□□□□□ -2.16
CTHRC1Q96CG8 RPL30P7-201ENST00000479312 323 ntBASIC1.53□□□□□ -2.16
CTHRC1Q96CG8 RNA5SP236-201ENST00000516169 116 ntBASIC1.53□□□□□ -2.16
CTHRC1Q96CG8 RNU2-60P-201ENST00000517290 128 ntBASIC1.53□□□□□ -2.16
CTHRC1Q96CG8 MIR502-201ENST00000606349 86 ntBASIC1.53□□□□□ -2.16
CTHRC1Q96CG8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.53□□□□□ -2.16
CTHRC1Q96CG8 AC008133.2-201ENST00000624540 351 ntBASIC1.53□□□□□ -2.16
CTHRC1Q96CG8 MIR570-201ENST00000384917 97 ntBASIC1.52□□□□□ -2.17
CTHRC1Q96CG8 SNORD41-201ENST00000386967 70 ntBASIC1.52□□□□□ -2.17
CTHRC1Q96CG8 AC245517.4-201ENST00000448601 281 ntBASIC1.52□□□□□ -2.17
CTHRC1Q96CG8 SNORD13-201ENST00000459299 104 ntBASIC1.52□□□□□ -2.17
CTHRC1Q96CG8 RNU6-947P-201ENST00000516264 106 ntBASIC1.52□□□□□ -2.17
CTHRC1Q96CG8 AC091932.4-201ENST00000623386 200 ntBASIC1.52□□□□□ -2.17
CTHRC1Q96CG8 Y_RNA.338-201ENST00000365320 114 ntBASIC1.51□□□□□ -2.17
CTHRC1Q96CG8 SNORA24-201ENST00000384096 131 ntBASIC1.51□□□□□ -2.17
CTHRC1Q96CG8 SNORA17.3-201ENST00000391159 129 ntBASIC1.51□□□□□ -2.17
CTHRC1Q96CG8 snoU13.16-201ENST00000459350 104 ntBASIC1.51□□□□□ -2.17
CTHRC1Q96CG8 RNA5SP445-201ENST00000515889 115 ntBASIC1.51□□□□□ -2.17
CTHRC1Q96CG8 SNORD111.1-201ENST00000516421 86 ntBASIC1.51□□□□□ -2.17
CTHRC1Q96CG8 RNU6-406P-201ENST00000516470 107 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 270.4 ms