Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.46□□□□□ -1.86
PTCD2Q8WV60 AL161756.2-201ENST00000604597 246 ntBASIC3.46□□□□□ -1.86
PTCD2Q8WV60 AC007179.3-201ENST00000604976 235 ntBASIC3.46□□□□□ -1.86
PTCD2Q8WV60 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PTCD2Q8WV60 SNORA38-201ENST00000363946 132 ntBASIC3.45□□□□□ -1.86
PTCD2Q8WV60 Y_RNA.205-201ENST00000364128 113 ntBASIC3.45□□□□□ -1.86
PTCD2Q8WV60 SNORA18.5-201ENST00000516616 101 ntBASIC3.45□□□□□ -1.86
PTCD2Q8WV60 SNORA70.24-201ENST00000517233 118 ntBASIC3.45□□□□□ -1.86
PTCD2Q8WV60 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PTCD2Q8WV60 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.45□□□□□ -1.86
PTCD2Q8WV60 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
PTCD2Q8WV60 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PTCD2Q8WV60 RNU1-91P-201ENST00000364746 163 ntBASIC3.44□□□□□ -1.86
PTCD2Q8WV60 MIR597-201ENST00000384968 97 ntBASIC3.44□□□□□ -1.86
PTCD2Q8WV60 SNRPGP12-201ENST00000449481 213 ntBASIC3.44□□□□□ -1.86
PTCD2Q8WV60 MIR2276-201ENST00000516886 89 ntBASIC3.44□□□□□ -1.86
PTCD2Q8WV60 RNA5SP380-201ENST00000517190 98 ntBASIC3.44□□□□□ -1.86
PTCD2Q8WV60 IGKV2-26-201ENST00000518305 343 ntBASIC3.44□□□□□ -1.86
PTCD2Q8WV60 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.44□□□□□ -1.86
PTCD2Q8WV60 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.44□□□□□ -1.86
PTCD2Q8WV60 MIR548AO-201ENST00000579992 96 ntBASIC3.44□□□□□ -1.86
PTCD2Q8WV60 AC022202.1-201ENST00000613515 211 ntBASIC3.44□□□□□ -1.86
PTCD2Q8WV60 SCARNA4.1-201ENST00000628597 123 ntBASIC3.44□□□□□ -1.86
PTCD2Q8WV60 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCD2Q8WV60 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.44□□□□□ -1.86
PTCD2Q8WV60 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCD2Q8WV60 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTCD2Q8WV60 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PTCD2Q8WV60 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.43□□□□□ -1.86
PTCD2Q8WV60 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
PTCD2Q8WV60 RNU5F-1-201ENST00000362507 117 ntBASIC3.43□□□□□ -1.86
PTCD2Q8WV60 RNA5SP50-201ENST00000363731 107 ntBASIC3.43□□□□□ -1.86
PTCD2Q8WV60 RNU6-805P-201ENST00000365643 106 ntBASIC3.43□□□□□ -1.86
PTCD2Q8WV60 SNORA9-201ENST00000384215 133 ntBASIC3.43□□□□□ -1.86
PTCD2Q8WV60 MIR491-201ENST00000384877 84 ntBASIC3.43□□□□□ -1.86
PTCD2Q8WV60 MIR520C-201ENST00000385005 87 ntBASIC3.43□□□□□ -1.86
PTCD2Q8WV60 RNA5SP292-201ENST00000390974 118 ntBASIC3.43□□□□□ -1.86
PTCD2Q8WV60 RNU6-587P-201ENST00000391282 106 ntBASIC3.43□□□□□ -1.86
PTCD2Q8WV60 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.43□□□□□ -1.86
PTCD2Q8WV60 RN7SL601P-201ENST00000471221 293 ntBASIC3.43□□□□□ -1.86
PTCD2Q8WV60 MIR3126-201ENST00000577443 74 ntBASIC3.43□□□□□ -1.86
PTCD2Q8WV60 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
PTCD2Q8WV60 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.42□□□□□ -1.86
PTCD2Q8WV60 RNU1-33P-201ENST00000364249 162 ntBASIC3.42□□□□□ -1.86
PTCD2Q8WV60 RNU6-949P-201ENST00000384040 107 ntBASIC3.42□□□□□ -1.86
PTCD2Q8WV60 RNU6-571P-201ENST00000384128 107 ntBASIC3.42□□□□□ -1.86
PTCD2Q8WV60 Y_RNA.532-201ENST00000384590 113 ntBASIC3.42□□□□□ -1.86
PTCD2Q8WV60 SNORA74D-201ENST00000516404 141 ntBASIC3.42□□□□□ -1.86
PTCD2Q8WV60 AL662814.1-201ENST00000617364 121 ntBASIC3.42□□□□□ -1.86
PTCD2Q8WV60 AC073476.4-201ENST00000628409 72 ntBASIC3.42□□□□□ -1.86
PTCD2Q8WV60 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTCD2Q8WV60 AL161722.3-201ENST00000605789 2983 ntBASIC3.42□□□□□ -1.86
PTCD2Q8WV60 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTCD2Q8WV60 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PTCD2Q8WV60 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTCD2Q8WV60 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PTCD2Q8WV60 Y_RNA.386-201ENST00000383913 105 ntBASIC3.41□□□□□ -1.86
PTCD2Q8WV60 HSPE1P24-201ENST00000450782 238 ntBASIC3.41□□□□□ -1.86
PTCD2Q8WV60 snoU13.27-201ENST00000459278 104 ntBASIC3.41□□□□□ -1.86
PTCD2Q8WV60 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
PTCD2Q8WV60 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PTCD2Q8WV60 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PTCD2Q8WV60 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PTCD2Q8WV60 RNU6-800P-201ENST00000384473 103 ntBASIC3.4□□□□□ -1.87
PTCD2Q8WV60 MIR548U-201ENST00000390728 81 ntBASIC3.4□□□□□ -1.87
PTCD2Q8WV60 SNORA48.8-201ENST00000391324 134 ntBASIC3.4□□□□□ -1.87
PTCD2Q8WV60 AC019129.1-201ENST00000403786 261 ntBASIC3.4□□□□□ -1.87
PTCD2Q8WV60 AC015818.7-201ENST00000428754 109 ntBASIC3.4□□□□□ -1.87
PTCD2Q8WV60 HMGN1P18-201ENST00000457642 277 ntBASIC3.4□□□□□ -1.87
PTCD2Q8WV60 AL357312.1-201ENST00000603879 298 ntBASIC3.4□□□□□ -1.87
PTCD2Q8WV60 MIR4251-201ENST00000635819 61 ntBASIC3.4□□□□□ -1.87
PTCD2Q8WV60 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.4□□□□□ -1.87
PTCD2Q8WV60 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTCD2Q8WV60 RNU6-208P-201ENST00000362431 107 ntBASIC3.39□□□□□ -1.87
PTCD2Q8WV60 BX276092.1-201ENST00000427368 251 ntBASIC3.39□□□□□ -1.87
PTCD2Q8WV60 RNA5SP481-201ENST00000516814 122 ntBASIC3.39□□□□□ -1.87
PTCD2Q8WV60 RNU6-303P-201ENST00000517091 106 ntBASIC3.39□□□□□ -1.87
PTCD2Q8WV60 RNA5SP437-201ENST00000517249 129 ntBASIC3.39□□□□□ -1.87
PTCD2Q8WV60 MIR3935-201ENST00000583472 104 ntBASIC3.39□□□□□ -1.87
PTCD2Q8WV60 MIR424-201ENST00000362227 98 ntBASIC3.38□□□□□ -1.87
PTCD2Q8WV60 Y_RNA.596-201ENST00000410462 109 ntBASIC3.38□□□□□ -1.87
PTCD2Q8WV60 AC005326.1-201ENST00000429197 123 ntBASIC3.38□□□□□ -1.87
PTCD2Q8WV60 AC138749.4-201ENST00000563970 127 ntBASIC3.38□□□□□ -1.87
PTCD2Q8WV60 AC104996.3-201ENST00000590718 94 ntBASIC3.38□□□□□ -1.87
PTCD2Q8WV60 MIR664A-201ENST00000626086 82 ntBASIC3.38□□□□□ -1.87
PTCD2Q8WV60 U6.109-201ENST00000636749 87 ntBASIC3.38□□□□□ -1.87
PTCD2Q8WV60 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.38□□□□□ -1.87
PTCD2Q8WV60 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.38□□□□□ -1.87
PTCD2Q8WV60 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTCD2Q8WV60 MAPK10-362ENST00000641864 4484 ntBASIC3.37□□□□□ -1.87
PTCD2Q8WV60 MIR1289-1-201ENST00000408836 144 ntBASIC3.37□□□□□ -1.87
PTCD2Q8WV60 RNVU1-2-201ENST00000516326 135 ntBASIC3.37□□□□□ -1.87
PTCD2Q8WV60 SUB1P4-201ENST00000566062 339 ntBASIC3.37□□□□□ -1.87
PTCD2Q8WV60 MIR3200-201ENST00000580767 85 ntBASIC3.37□□□□□ -1.87
PTCD2Q8WV60 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.37□□□□□ -1.87
PTCD2Q8WV60 U6.111-201ENST00000636093 83 ntBASIC3.37□□□□□ -1.87
PTCD2Q8WV60 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PTCD2Q8WV60 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTCD2Q8WV60 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PTCD2Q8WV60 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms