Protein–RNA interactions for Protein: Q8TDD1

DDX54, ATP-dependent RNA helicase DDX54, humanhuman

Known RBP Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54Q8TDD1 RNA5SP182-201ENST00000516064 82 ntBASIC2.64□□□□□ -1.99
DDX54Q8TDD1 MIR4778-201ENST00000577635 80 ntBASIC2.64□□□□□ -1.99
DDX54Q8TDD1 MIR3683-201ENST00000580847 82 ntBASIC2.64□□□□□ -1.99
DDX54Q8TDD1 MIR3163-201ENST00000581592 73 ntBASIC2.64□□□□□ -1.99
DDX54Q8TDD1 AC095038.3-201ENST00000634439 195 ntBASIC2.64□□□□□ -1.99
DDX54Q8TDD1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
DDX54Q8TDD1 AC005336.3-201ENST00000623833 2679 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-34-201ENST00000362441 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-12-201ENST00000362583 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-29-201ENST00000362834 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-9-201ENST00000362912 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-21-201ENST00000362963 81 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-14-201ENST00000363090 81 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-13-201ENST00000363358 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-41-201ENST00000363608 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-11-201ENST00000363616 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-5-201ENST00000363633 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-39-201ENST00000363694 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 Y_RNA.171-201ENST00000363760 102 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-4-201ENST00000363810 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-16-201ENST00000363887 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-6-201ENST00000363942 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-42-201ENST00000364273 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-15-201ENST00000364809 81 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-1-201ENST00000364961 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-26-201ENST00000365067 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-10-201ENST00000365073 81 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-43-201ENST00000365503 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-36-201ENST00000365629 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
DDX54Q8TDD1 HMGN2P39-201ENST00000398005 273 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 RNU7-96P-201ENST00000459535 64 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.63□□□□□ -1.99
DDX54Q8TDD1 IGLV3-17-201ENST00000519099 244 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 SNORD115-40-201ENST00000606510 82 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 AC021613.1-201ENST00000623880 111 ntBASIC2.63□□□□□ -1.99
DDX54Q8TDD1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
DDX54Q8TDD1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
DDX54Q8TDD1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
DDX54Q8TDD1 Y_RNA.226-201ENST00000364337 114 ntBASIC2.62□□□□□ -1.99
DDX54Q8TDD1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.62□□□□□ -1.99
DDX54Q8TDD1 AL035398.1-201ENST00000430869 322 ntBASIC2.62□□□□□ -1.99
DDX54Q8TDD1 AC069257.2-201ENST00000441819 155 ntBASIC2.62□□□□□ -1.99
DDX54Q8TDD1 RPL39P25-201ENST00000449384 154 ntBASIC2.62□□□□□ -1.99
DDX54Q8TDD1 RNU6-1258P-201ENST00000516911 111 ntBASIC2.62□□□□□ -1.99
DDX54Q8TDD1 AC004812.1-201ENST00000540773 146 ntBASIC2.62□□□□□ -1.99
DDX54Q8TDD1 SUB1P4-201ENST00000566062 339 ntBASIC2.62□□□□□ -1.99
DDX54Q8TDD1 MIR4781-201ENST00000585250 76 ntBASIC2.62□□□□□ -1.99
DDX54Q8TDD1 AC021506.2-201ENST00000612354 169 ntBASIC2.62□□□□□ -1.99
DDX54Q8TDD1 SNORD73B-201ENST00000364394 72 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 MIR520A-201ENST00000384862 85 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 SNORA48.1-201ENST00000390879 135 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 RNU6-816P-201ENST00000390914 107 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 SNORD28B-201ENST00000390993 75 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 RNU6-1268P-201ENST00000391214 107 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 RNU6-1239P-201ENST00000391310 107 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 POLR2J4-204ENST00000418424 324 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 AC003989.2-201ENST00000440224 169 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 SNORA40.13-201ENST00000516379 120 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 RNU6-958P-201ENST00000516995 106 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 Y_RNA.773-201ENST00000607168 90 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 AC087741.2-201ENST00000619415 172 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 MIR1255B1-201ENST00000636325 63 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
DDX54Q8TDD1 ZNF355P-201ENST00000427301 3216 ntBASIC2.61□□□□□ -1.99
DDX54Q8TDD1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.6□□□□□ -1.99
DDX54Q8TDD1 AL442644.1-201ENST00000454390 3105 ntBASIC2.6□□□□□ -1.99
DDX54Q8TDD1 RNU6-112P-201ENST00000363599 104 ntBASIC2.6□□□□□ -1.99
DDX54Q8TDD1 RNU6-1113P-201ENST00000384348 107 ntBASIC2.6□□□□□ -1.99
DDX54Q8TDD1 RNU6-296P-201ENST00000384608 107 ntBASIC2.6□□□□□ -1.99
DDX54Q8TDD1 RNY1P7-201ENST00000384743 110 ntBASIC2.6□□□□□ -1.99
DDX54Q8TDD1 MIR526A1-201ENST00000384897 85 ntBASIC2.6□□□□□ -1.99
DDX54Q8TDD1 RNU6-1190P-201ENST00000410811 104 ntBASIC2.6□□□□□ -1.99
DDX54Q8TDD1 AC113410.1-201ENST00000505029 247 ntBASIC2.6□□□□□ -1.99
DDX54Q8TDD1 MIR5089-201ENST00000580047 84 ntBASIC2.6□□□□□ -1.99
DDX54Q8TDD1 SNORD14A-201ENST00000606526 91 ntBASIC2.6□□□□□ -1.99
DDX54Q8TDD1 AL162726.3-218ENST00000636401 95 ntBASIC2.6□□□□□ -1.99
DDX54Q8TDD1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
DDX54Q8TDD1 AP000648.3-201ENST00000623539 4507 ntBASIC2.59□□□□□ -1.99
DDX54Q8TDD1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.59□□□□□ -1.99
DDX54Q8TDD1 RNU6-294P-201ENST00000364999 102 ntBASIC2.59□□□□□ -1.99
DDX54Q8TDD1 Y_RNA.370-201ENST00000365589 108 ntBASIC2.59□□□□□ -1.99
DDX54Q8TDD1 Y_RNA.531-201ENST00000384589 121 ntBASIC2.59□□□□□ -1.99
DDX54Q8TDD1 AC104435.1-201ENST00000483483 166 ntBASIC2.59□□□□□ -1.99
DDX54Q8TDD1 AC099513.1-201ENST00000490423 301 ntBASIC2.59□□□□□ -1.99
DDX54Q8TDD1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.59□□□□□ -1.99
DDX54Q8TDD1 MIR548AR-201ENST00000582191 57 ntBASIC2.59□□□□□ -1.99
DDX54Q8TDD1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.58□□□□□ -2
DDX54Q8TDD1 MIR136-201ENST00000385207 82 ntBASIC2.58□□□□□ -2
DDX54Q8TDD1 RNA5SP465-201ENST00000391195 109 ntBASIC2.58□□□□□ -2
DDX54Q8TDD1 AL022718.1-201ENST00000412004 84 ntBASIC2.58□□□□□ -2
DDX54Q8TDD1 RNU7-67P-201ENST00000459003 62 ntBASIC2.58□□□□□ -2
DDX54Q8TDD1 RPS23P4-201ENST00000487908 423 ntBASIC2.58□□□□□ -2
DDX54Q8TDD1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.58□□□□□ -2
DDX54Q8TDD1 RNU6-904P-201ENST00000516206 101 ntBASIC2.58□□□□□ -2
DDX54Q8TDD1 MIR5002-201ENST00000584713 97 ntBASIC2.58□□□□□ -2
DDX54Q8TDD1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
DDX54Q8TDD1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms