Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 AC003685.2-201ENST00000422795 395 ntBASIC2.25□□□□□ -2.05
TTC9BQ8N6N2 AL353813.1-201ENST00000440700 253 ntBASIC2.25□□□□□ -2.05
TTC9BQ8N6N2 RNU7-94P-201ENST00000459576 63 ntBASIC2.25□□□□□ -2.05
TTC9BQ8N6N2 Y_RNA.659-201ENST00000515994 113 ntBASIC2.25□□□□□ -2.05
TTC9BQ8N6N2 AC090821.2-201ENST00000523552 176 ntBASIC2.25□□□□□ -2.05
TTC9BQ8N6N2 AL353149.1-201ENST00000610667 244 ntBASIC2.25□□□□□ -2.05
TTC9BQ8N6N2 AL137847.3-201ENST00000611521 109 ntBASIC2.25□□□□□ -2.05
TTC9BQ8N6N2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 Y_RNA.10-201ENST00000362371 110 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 RNU6-363P-201ENST00000362895 105 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 SNORD115-3-201ENST00000363100 82 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 Y_RNA.336-201ENST00000365307 109 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 Y_RNA.467-201ENST00000384297 102 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 RNU6-163P-201ENST00000384396 106 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 MIR504-201ENST00000385065 83 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 AL035398.1-201ENST00000430869 322 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 AC099677.2-201ENST00000436385 175 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 AC087499.4-201ENST00000448505 178 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 RNU7-181P-201ENST00000517234 74 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 MIR6132-201ENST00000622083 109 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 AC021613.1-201ENST00000623880 111 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 MIR219B-201ENST00000637023 88 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 AP000648.3-201ENST00000623539 4507 ntBASIC2.24□□□□□ -2.05
TTC9BQ8N6N2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
TTC9BQ8N6N2 RNU6-661P-201ENST00000362409 107 ntBASIC2.23□□□□□ -2.05
TTC9BQ8N6N2 RNU6-60P-201ENST00000364792 103 ntBASIC2.23□□□□□ -2.05
TTC9BQ8N6N2 RNU6-787P-201ENST00000384032 107 ntBASIC2.23□□□□□ -2.05
TTC9BQ8N6N2 RNU6-679P-201ENST00000391003 106 ntBASIC2.23□□□□□ -2.05
TTC9BQ8N6N2 MIR1262-201ENST00000408276 93 ntBASIC2.23□□□□□ -2.05
TTC9BQ8N6N2 MIR4777-201ENST00000583710 86 ntBASIC2.23□□□□□ -2.05
TTC9BQ8N6N2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
TTC9BQ8N6N2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TTC9BQ8N6N2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
TTC9BQ8N6N2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 AC092881.1-201ENST00000638218 2733 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 SNORD115-19-201ENST00000363098 82 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 SNORD115-18-201ENST00000363293 82 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 SNORD115-17-201ENST00000364612 82 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 Y_RNA.313-201ENST00000365095 103 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 SNORA25B-201ENST00000365507 128 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 RNU6-616P-201ENST00000384353 107 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 SNORD38C-201ENST00000384381 69 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 SNORA18-201ENST00000384416 132 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 RNU6-160P-201ENST00000384591 107 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 MIR561-201ENST00000385216 97 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 AL627390.1-201ENST00000396055 340 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 SRIP3-201ENST00000413200 219 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 MRPL35P3-201ENST00000421557 364 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 RNU2-11P-201ENST00000459191 187 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 RPL23AP63-201ENST00000498752 471 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 RNU6-998P-201ENST00000515894 101 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 SNORA31.11-201ENST00000516528 139 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 RNU6-1258P-201ENST00000516911 111 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 U4atac.1-201ENST00000618345 95 ntBASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.22□□□□□ -2.05
TTC9BQ8N6N2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.21□□□□□ -2.05
TTC9BQ8N6N2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TTC9BQ8N6N2 Y_RNA.437-201ENST00000384113 113 ntBASIC2.21□□□□□ -2.06
TTC9BQ8N6N2 RNA5SP482-201ENST00000391269 118 ntBASIC2.21□□□□□ -2.06
TTC9BQ8N6N2 POLR2J4-204ENST00000418424 324 ntBASIC2.21□□□□□ -2.06
TTC9BQ8N6N2 CST2P1-201ENST00000425770 87 ntBASIC2.21□□□□□ -2.06
TTC9BQ8N6N2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TTC9BQ8N6N2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.21□□□□□ -2.06
TTC9BQ8N6N2 RNU7-113P-201ENST00000459273 62 ntBASIC2.21□□□□□ -2.06
TTC9BQ8N6N2 SNORD14A-201ENST00000606526 91 ntBASIC2.21□□□□□ -2.06
TTC9BQ8N6N2 Y_RNA.783-201ENST00000613546 102 ntBASIC2.21□□□□□ -2.06
TTC9BQ8N6N2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TTC9BQ8N6N2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TTC9BQ8N6N2 Y_RNA.99-201ENST00000363138 105 ntBASIC2.2□□□□□ -2.06
TTC9BQ8N6N2 SNORD115-35-201ENST00000365122 82 ntBASIC2.2□□□□□ -2.06
TTC9BQ8N6N2 Y_RNA.470-201ENST00000384307 117 ntBASIC2.2□□□□□ -2.06
TTC9BQ8N6N2 AL591806.2-201ENST00000433122 173 ntBASIC2.2□□□□□ -2.06
TTC9BQ8N6N2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.2□□□□□ -2.06
TTC9BQ8N6N2 AC011753.1-201ENST00000451001 220 ntBASIC2.2□□□□□ -2.06
TTC9BQ8N6N2 RNA5SP395-201ENST00000516567 118 ntBASIC2.2□□□□□ -2.06
TTC9BQ8N6N2 RNA5SP82-201ENST00000516707 92 ntBASIC2.2□□□□□ -2.06
TTC9BQ8N6N2 RNA5SP402-201ENST00000517148 110 ntBASIC2.2□□□□□ -2.06
TTC9BQ8N6N2 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.2□□□□□ -2.06
TTC9BQ8N6N2 AC024995.1-201ENST00000523014 93 ntBASIC2.2□□□□□ -2.06
TTC9BQ8N6N2 MIR5588-201ENST00000581890 63 ntBASIC2.2□□□□□ -2.06
TTC9BQ8N6N2 MIR548AE2-201ENST00000583456 67 ntBASIC2.2□□□□□ -2.06
TTC9BQ8N6N2 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
TTC9BQ8N6N2 SNORD115-13-201ENST00000363358 82 ntBASIC2.19□□□□□ -2.06
TTC9BQ8N6N2 SNORD115-16-201ENST00000363887 82 ntBASIC2.19□□□□□ -2.06
TTC9BQ8N6N2 RNA5SP493-201ENST00000364115 91 ntBASIC2.19□□□□□ -2.06
TTC9BQ8N6N2 SNORD115-1-201ENST00000364961 82 ntBASIC2.19□□□□□ -2.06
TTC9BQ8N6N2 SNORA32-201ENST00000384072 121 ntBASIC2.19□□□□□ -2.06
TTC9BQ8N6N2 MIR515-2-201ENST00000384883 83 ntBASIC2.19□□□□□ -2.06
TTC9BQ8N6N2 MIR515-1-201ENST00000384884 83 ntBASIC2.19□□□□□ -2.06
TTC9BQ8N6N2 MIR516B2-201ENST00000385190 85 ntBASIC2.19□□□□□ -2.06
TTC9BQ8N6N2 AL451046.2-201ENST00000403074 277 ntBASIC2.19□□□□□ -2.06
TTC9BQ8N6N2 RNU4-69P-201ENST00000410677 143 ntBASIC2.19□□□□□ -2.06
TTC9BQ8N6N2 MIR1270-201ENST00000459320 83 ntBASIC2.19□□□□□ -2.06
TTC9BQ8N6N2 RNU7-96P-201ENST00000459535 64 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms