Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRIM48Q8IWZ4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
TRIM48Q8IWZ4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
TRIM48Q8IWZ4 AC092881.1-201ENST00000638218 2733 ntBASIC2.07□□□□□ -2.08
TRIM48Q8IWZ4 RNU6-414P-201ENST00000363705 104 ntBASIC2.07□□□□□ -2.08
TRIM48Q8IWZ4 Y_RNA.198-201ENST00000364013 98 ntBASIC2.07□□□□□ -2.08
TRIM48Q8IWZ4 DEFB122-202ENST00000569013 197 ntBASIC2.07□□□□□ -2.08
TRIM48Q8IWZ4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.07□□□□□ -2.08
TRIM48Q8IWZ4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.07□□□□□ -2.08
TRIM48Q8IWZ4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
TRIM48Q8IWZ4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
TRIM48Q8IWZ4 SNORA67.3-201ENST00000384366 140 ntBASIC2.06□□□□□ -2.08
TRIM48Q8IWZ4 AC004965.1-201ENST00000413033 213 ntBASIC2.06□□□□□ -2.08
TRIM48Q8IWZ4 AC079804.2-201ENST00000490376 200 ntBASIC2.06□□□□□ -2.08
TRIM48Q8IWZ4 RNU6-917P-201ENST00000516294 104 ntBASIC2.06□□□□□ -2.08
TRIM48Q8IWZ4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM48Q8IWZ4 AL035470.1-201ENST00000622571 220 ntBASIC2.06□□□□□ -2.08
TRIM48Q8IWZ4 AC021613.1-201ENST00000623880 111 ntBASIC2.06□□□□□ -2.08
TRIM48Q8IWZ4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.06□□□□□ -2.08
TRIM48Q8IWZ4 SNORA63.5-201ENST00000363548 123 ntBASIC2.05□□□□□ -2.08
TRIM48Q8IWZ4 RNU6-755P-201ENST00000364400 103 ntBASIC2.05□□□□□ -2.08
TRIM48Q8IWZ4 SNORD12C-201ENST00000386307 89 ntBASIC2.05□□□□□ -2.08
TRIM48Q8IWZ4 RNU6-1190P-201ENST00000410811 104 ntBASIC2.05□□□□□ -2.08
TRIM48Q8IWZ4 AL512326.2-201ENST00000426359 151 ntBASIC2.05□□□□□ -2.08
TRIM48Q8IWZ4 RPS29P29-201ENST00000456396 171 ntBASIC2.05□□□□□ -2.08
TRIM48Q8IWZ4 AC090255.1-201ENST00000495779 349 ntBASIC2.05□□□□□ -2.08
TRIM48Q8IWZ4 AC104984.5-201ENST00000586878 94 ntBASIC2.05□□□□□ -2.08
TRIM48Q8IWZ4 uc_338.28-201ENST00000612082 187 ntBASIC2.05□□□□□ -2.08
TRIM48Q8IWZ4 AC243994.1-201ENST00000618627 109 ntBASIC2.05□□□□□ -2.08
TRIM48Q8IWZ4 Y_RNA.213-201ENST00000364178 111 ntBASIC2.04□□□□□ -2.08
TRIM48Q8IWZ4 RNU6-147P-201ENST00000383983 107 ntBASIC2.04□□□□□ -2.08
TRIM48Q8IWZ4 RNU4-52P-201ENST00000384209 138 ntBASIC2.04□□□□□ -2.08
TRIM48Q8IWZ4 MIR194-1-201ENST00000384892 85 ntBASIC2.04□□□□□ -2.08
TRIM48Q8IWZ4 MIR759-201ENST00000390224 91 ntBASIC2.04□□□□□ -2.08
TRIM48Q8IWZ4 RNU6-913P-201ENST00000390913 95 ntBASIC2.04□□□□□ -2.08
TRIM48Q8IWZ4 RNA5SP212-201ENST00000391223 107 ntBASIC2.04□□□□□ -2.08
TRIM48Q8IWZ4 AL023284.1-201ENST00000403956 276 ntBASIC2.04□□□□□ -2.08
TRIM48Q8IWZ4 RNA5SP144-201ENST00000410846 116 ntBASIC2.04□□□□□ -2.08
TRIM48Q8IWZ4 RNU2-13P-201ENST00000515909 113 ntBASIC2.04□□□□□ -2.08
TRIM48Q8IWZ4 SNORA74.3-201ENST00000517108 154 ntBASIC2.04□□□□□ -2.08
TRIM48Q8IWZ4 MIR4791-201ENST00000607666 84 ntBASIC2.04□□□□□ -2.08
TRIM48Q8IWZ4 MIR6715A-201ENST00000615929 79 ntBASIC2.04□□□□□ -2.08
TRIM48Q8IWZ4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.03□□□□□ -2.08
TRIM48Q8IWZ4 RNU6-1123P-201ENST00000362347 106 ntBASIC2.03□□□□□ -2.08
TRIM48Q8IWZ4 SNORD114-1-201ENST00000362705 72 ntBASIC2.03□□□□□ -2.08
TRIM48Q8IWZ4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.03□□□□□ -2.08
TRIM48Q8IWZ4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
TRIM48Q8IWZ4 RPL23AP6-201ENST00000446637 472 ntBASIC2.03□□□□□ -2.08
TRIM48Q8IWZ4 AC011753.1-201ENST00000451001 220 ntBASIC2.03□□□□□ -2.08
TRIM48Q8IWZ4 snoU13.15-201ENST00000459407 104 ntBASIC2.03□□□□□ -2.08
TRIM48Q8IWZ4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM48Q8IWZ4 MIR3683-201ENST00000580847 82 ntBASIC2.03□□□□□ -2.08
TRIM48Q8IWZ4 AL773524.1-201ENST00000614065 229 ntBASIC2.03□□□□□ -2.08
TRIM48Q8IWZ4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.02□□□□□ -2.09
TRIM48Q8IWZ4 MIR450A1-201ENST00000362262 91 ntBASIC2.02□□□□□ -2.09
TRIM48Q8IWZ4 Y_RNA.116-201ENST00000363292 103 ntBASIC2.02□□□□□ -2.09
TRIM48Q8IWZ4 Y_RNA.171-201ENST00000363760 102 ntBASIC2.02□□□□□ -2.09
TRIM48Q8IWZ4 RNU6-1107P-201ENST00000364817 104 ntBASIC2.02□□□□□ -2.09
TRIM48Q8IWZ4 RNA5SP259-201ENST00000365541 109 ntBASIC2.02□□□□□ -2.09
TRIM48Q8IWZ4 SNORA70.7-201ENST00000384159 133 ntBASIC2.02□□□□□ -2.09
TRIM48Q8IWZ4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
TRIM48Q8IWZ4 RNA5SP338-201ENST00000410495 85 ntBASIC2.02□□□□□ -2.09
TRIM48Q8IWZ4 POLR2J4-204ENST00000418424 324 ntBASIC2.02□□□□□ -2.09
TRIM48Q8IWZ4 HMGN2P38-201ENST00000423806 265 ntBASIC2.02□□□□□ -2.09
TRIM48Q8IWZ4 MIR4287-201ENST00000579398 78 ntBASIC2.02□□□□□ -2.09
TRIM48Q8IWZ4 MIR5694-201ENST00000581190 76 ntBASIC2.02□□□□□ -2.09
TRIM48Q8IWZ4 AL513534.2-201ENST00000603836 250 ntBASIC2.02□□□□□ -2.09
TRIM48Q8IWZ4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TRIM48Q8IWZ4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
TRIM48Q8IWZ4 RNY4P6-201ENST00000363667 96 ntBASIC2.01□□□□□ -2.09
TRIM48Q8IWZ4 Y_RNA.281-201ENST00000364774 94 ntBASIC2.01□□□□□ -2.09
TRIM48Q8IWZ4 RNA5SP37-201ENST00000365420 130 ntBASIC2.01□□□□□ -2.09
TRIM48Q8IWZ4 Y_RNA.362-201ENST00000365518 110 ntBASIC2.01□□□□□ -2.09
TRIM48Q8IWZ4 HMGN1P33-201ENST00000432945 451 ntBASIC2.01□□□□□ -2.09
TRIM48Q8IWZ4 RNU6-717P-201ENST00000459076 104 ntBASIC2.01□□□□□ -2.09
TRIM48Q8IWZ4 RNU6-412P-201ENST00000516434 106 ntBASIC2.01□□□□□ -2.09
TRIM48Q8IWZ4 RNU7-53P-201ENST00000516705 60 ntBASIC2.01□□□□□ -2.09
TRIM48Q8IWZ4 RNU7-6P-201ENST00000516845 62 ntBASIC2.01□□□□□ -2.09
TRIM48Q8IWZ4 RNU6-1258P-201ENST00000516911 111 ntBASIC2.01□□□□□ -2.09
TRIM48Q8IWZ4 AC004812.1-201ENST00000540773 146 ntBASIC2.01□□□□□ -2.09
TRIM48Q8IWZ4 MIR3613-201ENST00000579844 87 ntBASIC2.01□□□□□ -2.09
TRIM48Q8IWZ4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.01□□□□□ -2.09
TRIM48Q8IWZ4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2□□□□□ -2.09
TRIM48Q8IWZ4 Y_RNA.85-201ENST00000363014 111 ntBASIC2□□□□□ -2.09
TRIM48Q8IWZ4 RNA5SP138-201ENST00000365098 114 ntBASIC2□□□□□ -2.09
TRIM48Q8IWZ4 Y_RNA.344-201ENST00000365381 112 ntBASIC2□□□□□ -2.09
TRIM48Q8IWZ4 SNORA24-201ENST00000384096 131 ntBASIC2□□□□□ -2.09
TRIM48Q8IWZ4 MIR513A1-201ENST00000385138 129 ntBASIC2□□□□□ -2.09
TRIM48Q8IWZ4 RNU6-1319P-201ENST00000390855 104 ntBASIC2□□□□□ -2.09
TRIM48Q8IWZ4 RNU6-747P-201ENST00000390928 104 ntBASIC2□□□□□ -2.09
TRIM48Q8IWZ4 RNU6-241P-201ENST00000391148 104 ntBASIC2□□□□□ -2.09
TRIM48Q8IWZ4 RNU6-177P-201ENST00000411257 104 ntBASIC2□□□□□ -2.09
TRIM48Q8IWZ4 AL022718.1-201ENST00000412004 84 ntBASIC2□□□□□ -2.09
TRIM48Q8IWZ4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2□□□□□ -2.09
TRIM48Q8IWZ4 MIR6840-201ENST00000611937 71 ntBASIC2□□□□□ -2.09
TRIM48Q8IWZ4 Y_RNA.783-201ENST00000613546 102 ntBASIC2□□□□□ -2.09
TRIM48Q8IWZ4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2□□□□□ -2.09
TRIM48Q8IWZ4 RNU6-106P-201ENST00000384405 107 ntBASIC1.99□□□□□ -2.09
TRIM48Q8IWZ4 SNORA51.10-201ENST00000384418 136 ntBASIC1.99□□□□□ -2.09
TRIM48Q8IWZ4 Y_RNA.531-201ENST00000384589 121 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms