Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SNORD116-10-201ENST00000363791 102 ntBASIC3.08□□□□□ -1.92
RNF135Q8IUD6 RNU6-652P-201ENST00000365488 107 ntBASIC3.08□□□□□ -1.92
RNF135Q8IUD6 RNU6-616P-201ENST00000384353 107 ntBASIC3.08□□□□□ -1.92
RNF135Q8IUD6 SNORA46-201ENST00000384762 135 ntBASIC3.08□□□□□ -1.92
RNF135Q8IUD6 RNA5SP270-201ENST00000411361 118 ntBASIC3.08□□□□□ -1.92
RNF135Q8IUD6 UQCRHP3-201ENST00000451503 251 ntBASIC3.08□□□□□ -1.92
RNF135Q8IUD6 RN7SL75P-201ENST00000461926 281 ntBASIC3.08□□□□□ -1.92
RNF135Q8IUD6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
RNF135Q8IUD6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.08□□□□□ -1.92
RNF135Q8IUD6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RNF135Q8IUD6 AC073325.2-201ENST00000339545 159 ntBASIC3.07□□□□□ -1.92
RNF135Q8IUD6 Y_RNA.171-201ENST00000363760 102 ntBASIC3.07□□□□□ -1.92
RNF135Q8IUD6 SNORA1.2-201ENST00000365189 134 ntBASIC3.07□□□□□ -1.92
RNF135Q8IUD6 MIR518A2-201ENST00000384966 87 ntBASIC3.07□□□□□ -1.92
RNF135Q8IUD6 MIR452-201ENST00000385020 85 ntBASIC3.07□□□□□ -1.92
RNF135Q8IUD6 RNU7-113P-201ENST00000459273 62 ntBASIC3.07□□□□□ -1.92
RNF135Q8IUD6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
RNF135Q8IUD6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.07□□□□□ -1.92
RNF135Q8IUD6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RNF135Q8IUD6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
RNF135Q8IUD6 MIR520A-201ENST00000384862 85 ntBASIC3.06□□□□□ -1.92
RNF135Q8IUD6 MIR516B2-201ENST00000385190 85 ntBASIC3.06□□□□□ -1.92
RNF135Q8IUD6 RNU6-788P-201ENST00000390967 104 ntBASIC3.06□□□□□ -1.92
RNF135Q8IUD6 SNORD77B-201ENST00000391112 67 ntBASIC3.06□□□□□ -1.92
RNF135Q8IUD6 snoU13.15-201ENST00000459407 104 ntBASIC3.06□□□□□ -1.92
RNF135Q8IUD6 RNA5SP24-201ENST00000516478 95 ntBASIC3.06□□□□□ -1.92
RNF135Q8IUD6 MIR548BB-201ENST00000626714 66 ntBASIC3.06□□□□□ -1.92
RNF135Q8IUD6 AC093831.2-201ENST00000624393 3427 ntBASIC3.05□□□□□ -1.92
RNF135Q8IUD6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.05□□□□□ -1.92
RNF135Q8IUD6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
RNF135Q8IUD6 Y_RNA.191-201ENST00000363972 113 ntBASIC3.05□□□□□ -1.92
RNF135Q8IUD6 SNORD58A-201ENST00000383875 65 ntBASIC3.05□□□□□ -1.92
RNF135Q8IUD6 SNORA48.1-201ENST00000390879 135 ntBASIC3.05□□□□□ -1.92
RNF135Q8IUD6 U8.15-201ENST00000390947 134 ntBASIC3.05□□□□□ -1.92
RNF135Q8IUD6 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.05□□□□□ -1.92
RNF135Q8IUD6 MIR1270-201ENST00000459320 83 ntBASIC3.05□□□□□ -1.92
RNF135Q8IUD6 RNU6-1258P-201ENST00000516911 111 ntBASIC3.05□□□□□ -1.92
RNF135Q8IUD6 AC107016.2-201ENST00000547968 190 ntBASIC3.05□□□□□ -1.92
RNF135Q8IUD6 SNORD53-201ENST00000579969 78 ntBASIC3.05□□□□□ -1.92
RNF135Q8IUD6 MIR4439-201ENST00000583746 80 ntBASIC3.05□□□□□ -1.92
RNF135Q8IUD6 AC096720.1-201ENST00000604441 183 ntBASIC3.05□□□□□ -1.92
RNF135Q8IUD6 AL512310.12-203ENST00000640543 90 ntBASIC3.05□□□□□ -1.92
RNF135Q8IUD6 RNU6-1313P-201ENST00000362622 102 ntBASIC3.04□□□□□ -1.92
RNF135Q8IUD6 U8.2-201ENST00000363156 134 ntBASIC3.04□□□□□ -1.92
RNF135Q8IUD6 RNU7-34P-201ENST00000459394 64 ntBASIC3.04□□□□□ -1.92
RNF135Q8IUD6 RNU7-45P-201ENST00000459460 63 ntBASIC3.04□□□□□ -1.92
RNF135Q8IUD6 SCARNA16.3-201ENST00000516595 184 ntBASIC3.04□□□□□ -1.92
RNF135Q8IUD6 RNA5SP437-201ENST00000517249 129 ntBASIC3.04□□□□□ -1.92
RNF135Q8IUD6 SUB1P4-201ENST00000566062 339 ntBASIC3.04□□□□□ -1.92
RNF135Q8IUD6 MIR548AE2-201ENST00000583456 67 ntBASIC3.04□□□□□ -1.92
RNF135Q8IUD6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RNF135Q8IUD6 AC096644.4-201ENST00000563417 2912 ntBASIC3.03□□□□□ -1.92
RNF135Q8IUD6 SNORD115-2-201ENST00000362842 82 ntBASIC3.03□□□□□ -1.92
RNF135Q8IUD6 RNU6-509P-201ENST00000363519 107 ntBASIC3.03□□□□□ -1.92
RNF135Q8IUD6 SNORA1.1-201ENST00000364671 133 ntBASIC3.03□□□□□ -1.92
RNF135Q8IUD6 SNORD115-20-201ENST00000365099 82 ntBASIC3.03□□□□□ -1.92
RNF135Q8IUD6 Y_RNA.370-201ENST00000365589 108 ntBASIC3.03□□□□□ -1.92
RNF135Q8IUD6 RNU1-109P-201ENST00000383960 147 ntBASIC3.03□□□□□ -1.92
RNF135Q8IUD6 Y_RNA.430-201ENST00000384081 110 ntBASIC3.03□□□□□ -1.92
RNF135Q8IUD6 SNORA70.7-201ENST00000384159 133 ntBASIC3.03□□□□□ -1.92
RNF135Q8IUD6 MIR136-201ENST00000385207 82 ntBASIC3.03□□□□□ -1.92
RNF135Q8IUD6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
RNF135Q8IUD6 HMGN2P39-201ENST00000398005 273 ntBASIC3.03□□□□□ -1.92
RNF135Q8IUD6 RNA5SP274-201ENST00000410484 108 ntBASIC3.03□□□□□ -1.92
RNF135Q8IUD6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RNF135Q8IUD6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.02□□□□□ -1.93
RNF135Q8IUD6 AP000648.3-201ENST00000623539 4507 ntBASIC3.02□□□□□ -1.93
RNF135Q8IUD6 Y_RNA.470-201ENST00000384307 117 ntBASIC3.02□□□□□ -1.93
RNF135Q8IUD6 Y_RNA.607-201ENST00000410597 98 ntBASIC3.02□□□□□ -1.93
RNF135Q8IUD6 AC093850.1-201ENST00000454121 251 ntBASIC3.02□□□□□ -1.93
RNF135Q8IUD6 MIR376B-201ENST00000614515 100 ntBASIC3.02□□□□□ -1.93
RNF135Q8IUD6 AC108206.1-201ENST00000570186 4159 ntBASIC3.01□□□□□ -1.93
RNF135Q8IUD6 RNU6-1319P-201ENST00000390855 104 ntBASIC3.01□□□□□ -1.93
RNF135Q8IUD6 RNU6-747P-201ENST00000390928 104 ntBASIC3.01□□□□□ -1.93
RNF135Q8IUD6 RNU6-241P-201ENST00000391148 104 ntBASIC3.01□□□□□ -1.93
RNF135Q8IUD6 MIR889-201ENST00000401280 79 ntBASIC3.01□□□□□ -1.93
RNF135Q8IUD6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.01□□□□□ -1.93
RNF135Q8IUD6 RNU6-177P-201ENST00000411257 104 ntBASIC3.01□□□□□ -1.93
RNF135Q8IUD6 RN7SKP192-201ENST00000411291 327 ntBASIC3.01□□□□□ -1.93
RNF135Q8IUD6 AC108729.3-201ENST00000513484 108 ntBASIC3.01□□□□□ -1.93
RNF135Q8IUD6 RNA5SP33-201ENST00000516687 98 ntBASIC3.01□□□□□ -1.93
RNF135Q8IUD6 SNORD14A-201ENST00000606526 91 ntBASIC3.01□□□□□ -1.93
RNF135Q8IUD6 AC021506.2-201ENST00000612354 169 ntBASIC3.01□□□□□ -1.93
RNF135Q8IUD6 AL513423.1-201ENST00000621695 132 ntBASIC3.01□□□□□ -1.93
RNF135Q8IUD6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.01□□□□□ -1.93
RNF135Q8IUD6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
RNF135Q8IUD6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3□□□□□ -1.93
RNF135Q8IUD6 RNU6-859P-201ENST00000362728 107 ntBASIC3□□□□□ -1.93
RNF135Q8IUD6 RNA5SP68-201ENST00000363885 119 ntBASIC3□□□□□ -1.93
RNF135Q8IUD6 Y_RNA.316-201ENST00000365118 111 ntBASIC3□□□□□ -1.93
RNF135Q8IUD6 RNA5SP501-201ENST00000410990 112 ntBASIC3□□□□□ -1.93
RNF135Q8IUD6 RN7SL499P-201ENST00000481141 276 ntBASIC3□□□□□ -1.93
RNF135Q8IUD6 RN7SL633P-201ENST00000488974 297 ntBASIC3□□□□□ -1.93
RNF135Q8IUD6 RNU7-53P-201ENST00000516705 60 ntBASIC3□□□□□ -1.93
RNF135Q8IUD6 RNA5SP481-201ENST00000516814 122 ntBASIC3□□□□□ -1.93
RNF135Q8IUD6 MIR4709-201ENST00000577272 72 ntBASIC3□□□□□ -1.93
RNF135Q8IUD6 AC103810.6-201ENST00000606708 136 ntBASIC3□□□□□ -1.93
RNF135Q8IUD6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RNF135Q8IUD6 AL161431.1-201ENST00000618966 4205 ntBASIC2.99□□□□□ -1.93
RNF135Q8IUD6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms