Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 SNORD115-40-201ENST00000606510 82 ntBASIC1.25□□□□□ -2.21
NFE4Q86UQ8 MIR4791-201ENST00000607666 84 ntBASIC1.25□□□□□ -2.21
NFE4Q86UQ8 AL096861.1-201ENST00000610899 123 ntBASIC1.25□□□□□ -2.21
NFE4Q86UQ8 GHRLOS.1-201ENST00000610995 70 ntBASIC1.25□□□□□ -2.21
NFE4Q86UQ8 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.25□□□□□ -2.21
NFE4Q86UQ8 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.25□□□□□ -2.21
NFE4Q86UQ8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.25□□□□□ -2.21
NFE4Q86UQ8 AC010332.2-201ENST00000613083 1904 ntBASIC1.25□□□□□ -2.21
NFE4Q86UQ8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.24□□□□□ -2.21
NFE4Q86UQ8 RPS27P16-201ENST00000425758 201 ntBASIC1.24□□□□□ -2.21
NFE4Q86UQ8 RNU7-67P-201ENST00000459003 62 ntBASIC1.24□□□□□ -2.21
NFE4Q86UQ8 AC107297.1-201ENST00000459991 176 ntBASIC1.24□□□□□ -2.21
NFE4Q86UQ8 RPS29P24-201ENST00000486345 171 ntBASIC1.24□□□□□ -2.21
NFE4Q86UQ8 RNU7-43P-201ENST00000516554 64 ntBASIC1.24□□□□□ -2.21
NFE4Q86UQ8 RNU6-958P-201ENST00000516995 106 ntBASIC1.24□□□□□ -2.21
NFE4Q86UQ8 MIR3192-201ENST00000584920 77 ntBASIC1.24□□□□□ -2.21
NFE4Q86UQ8 MIR6845-201ENST00000613182 61 ntBASIC1.24□□□□□ -2.21
NFE4Q86UQ8 AC008133.2-201ENST00000624540 351 ntBASIC1.24□□□□□ -2.21
NFE4Q86UQ8 AL596211.1-201ENST00000569873 2277 ntBASIC1.24□□□□□ -2.21
NFE4Q86UQ8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
NFE4Q86UQ8 RNU6-309P-201ENST00000364573 106 ntBASIC1.23□□□□□ -2.21
NFE4Q86UQ8 Y_RNA.294-201ENST00000364916 102 ntBASIC1.23□□□□□ -2.21
NFE4Q86UQ8 RNU6-1065P-201ENST00000384513 106 ntBASIC1.23□□□□□ -2.21
NFE4Q86UQ8 MIR613-201ENST00000385248 95 ntBASIC1.23□□□□□ -2.21
NFE4Q86UQ8 RNU1-78P-201ENST00000391248 165 ntBASIC1.23□□□□□ -2.21
NFE4Q86UQ8 AL627390.1-201ENST00000396055 340 ntBASIC1.23□□□□□ -2.21
NFE4Q86UQ8 MIR934-201ENST00000401241 83 ntBASIC1.23□□□□□ -2.21
NFE4Q86UQ8 RNU6-257P-201ENST00000410238 98 ntBASIC1.23□□□□□ -2.21
NFE4Q86UQ8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.23□□□□□ -2.21
NFE4Q86UQ8 RNU2-13P-201ENST00000515909 113 ntBASIC1.23□□□□□ -2.21
NFE4Q86UQ8 AP001328.1-201ENST00000528550 176 ntBASIC1.23□□□□□ -2.21
NFE4Q86UQ8 MIR4769-201ENST00000584126 77 ntBASIC1.23□□□□□ -2.21
NFE4Q86UQ8 AC243994.1-201ENST00000618627 109 ntBASIC1.23□□□□□ -2.21
NFE4Q86UQ8 AC091895.1-201ENST00000624494 256 ntBASIC1.23□□□□□ -2.21
NFE4Q86UQ8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.23□□□□□ -2.21
NFE4Q86UQ8 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.22□□□□□ -2.21
NFE4Q86UQ8 RNU6-704P-201ENST00000364162 103 ntBASIC1.22□□□□□ -2.21
NFE4Q86UQ8 SNORD18B-201ENST00000365659 72 ntBASIC1.22□□□□□ -2.21
NFE4Q86UQ8 SNORA51.10-201ENST00000384418 136 ntBASIC1.22□□□□□ -2.21
NFE4Q86UQ8 MTND4LP9-201ENST00000427694 174 ntBASIC1.22□□□□□ -2.21
NFE4Q86UQ8 RPS29P29-201ENST00000456396 171 ntBASIC1.22□□□□□ -2.21
NFE4Q86UQ8 RNU2-11P-201ENST00000459191 187 ntBASIC1.22□□□□□ -2.21
NFE4Q86UQ8 RNU6-998P-201ENST00000515894 101 ntBASIC1.22□□□□□ -2.21
NFE4Q86UQ8 RNA5SP236-201ENST00000516169 116 ntBASIC1.22□□□□□ -2.21
NFE4Q86UQ8 Y_RNA.690-201ENST00000516603 95 ntBASIC1.22□□□□□ -2.21
NFE4Q86UQ8 RNU7-70P-201ENST00000516941 66 ntBASIC1.22□□□□□ -2.21
NFE4Q86UQ8 AL512310.8-201ENST00000550183 120 ntBASIC1.22□□□□□ -2.21
NFE4Q86UQ8 MIR4422-201ENST00000581938 83 ntBASIC1.22□□□□□ -2.21
NFE4Q86UQ8 AC084768.2-201ENST00000622736 221 ntBASIC1.22□□□□□ -2.21
NFE4Q86UQ8 AC091932.4-201ENST00000623386 200 ntBASIC1.22□□□□□ -2.21
NFE4Q86UQ8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
NFE4Q86UQ8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.22□□□□□ -2.21
NFE4Q86UQ8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
NFE4Q86UQ8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
NFE4Q86UQ8 SNORD33-201ENST00000362761 85 ntBASIC1.21□□□□□ -2.22
NFE4Q86UQ8 SNORA25.3-201ENST00000363205 127 ntBASIC1.21□□□□□ -2.22
NFE4Q86UQ8 Y_RNA.120-201ENST00000363304 110 ntBASIC1.21□□□□□ -2.22
NFE4Q86UQ8 RNU1-133P-201ENST00000364867 167 ntBASIC1.21□□□□□ -2.22
NFE4Q86UQ8 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.21□□□□□ -2.22
NFE4Q86UQ8 AL035398.1-201ENST00000430869 322 ntBASIC1.21□□□□□ -2.22
NFE4Q86UQ8 RNU7-45P-201ENST00000459460 63 ntBASIC1.21□□□□□ -2.22
NFE4Q86UQ8 RNA5SP445-201ENST00000515889 115 ntBASIC1.21□□□□□ -2.22
NFE4Q86UQ8 SNORA31.4-201ENST00000516049 129 ntBASIC1.21□□□□□ -2.22
NFE4Q86UQ8 RNU6-165P-201ENST00000517170 99 ntBASIC1.21□□□□□ -2.22
NFE4Q86UQ8 MIR3664-201ENST00000579074 99 ntBASIC1.21□□□□□ -2.22
NFE4Q86UQ8 HSPE1P19-201ENST00000603327 295 ntBASIC1.21□□□□□ -2.22
NFE4Q86UQ8 AL357312.1-201ENST00000603879 298 ntBASIC1.21□□□□□ -2.22
NFE4Q86UQ8 MIR4251-201ENST00000635819 61 ntBASIC1.21□□□□□ -2.22
NFE4Q86UQ8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
NFE4Q86UQ8 MIR302B-201ENST00000362188 73 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 RNU4-16P-201ENST00000364737 141 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 Y_RNA.537-201ENST00000384626 109 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 RNU6-1067P-201ENST00000384752 107 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
NFE4Q86UQ8 RNU6-913P-201ENST00000390913 95 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 SNORA67.5-201ENST00000391036 107 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 Y_RNA.586-201ENST00000391146 98 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 RNU6-1190P-201ENST00000410811 104 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 RNU4-61P-201ENST00000411243 107 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.2□□□□□ -2.22
NFE4Q86UQ8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.2□□□□□ -2.22
NFE4Q86UQ8 snoU13.25-201ENST00000458945 104 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 Y_RNA.651-201ENST00000459380 103 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 RNU7-96P-201ENST00000459535 64 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 RNU7-80P-201ENST00000459562 61 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 RNA5SP458-201ENST00000516188 119 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 RNU6-970P-201ENST00000516312 107 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 MIR3683-201ENST00000580847 82 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 MIR4285-201ENST00000581001 85 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.2□□□□□ -2.22
NFE4Q86UQ8 AP001485.1-201ENST00000604799 199 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 AL161722.3-201ENST00000605789 2983 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 AL022345.2-201ENST00000606307 135 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 AC011603.4-201ENST00000611325 277 ntBASIC1.2□□□□□ -2.22
NFE4Q86UQ8 SNORA24-201ENST00000384096 131 ntBASIC1.19□□□□□ -2.22
NFE4Q86UQ8 SNORA70.7-201ENST00000384159 133 ntBASIC1.19□□□□□ -2.22
NFE4Q86UQ8 SNORA40-201ENST00000388090 126 ntBASIC1.19□□□□□ -2.22
NFE4Q86UQ8 HMGN1P33-201ENST00000432945 451 ntBASIC1.19□□□□□ -2.22
NFE4Q86UQ8 MTATP6P21-201ENST00000440681 189 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms