Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU1-58P-201ENST00000362413 163 ntBASIC2.93□□□□□ -1.94
LYSMD3Q7Z3D4 SNORA5B-201ENST00000363786 132 ntBASIC2.93□□□□□ -1.94
LYSMD3Q7Z3D4 SNORD123-201ENST00000459473 70 ntBASIC2.93□□□□□ -1.94
LYSMD3Q7Z3D4 AC093729.1-201ENST00000513074 128 ntBASIC2.93□□□□□ -1.94
LYSMD3Q7Z3D4 AC107016.2-201ENST00000547968 190 ntBASIC2.93□□□□□ -1.94
LYSMD3Q7Z3D4 AC026271.5-201ENST00000577873 130 ntBASIC2.93□□□□□ -1.94
LYSMD3Q7Z3D4 RNU6-90P-201ENST00000606352 106 ntBASIC2.93□□□□□ -1.94
LYSMD3Q7Z3D4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.93□□□□□ -1.94
LYSMD3Q7Z3D4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
LYSMD3Q7Z3D4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LYSMD3Q7Z3D4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
LYSMD3Q7Z3D4 MAPK10-266ENST00000641066 6555 ntBASIC2.92□□□□□ -1.94
LYSMD3Q7Z3D4 RNU6-1229P-201ENST00000364295 107 ntBASIC2.92□□□□□ -1.94
LYSMD3Q7Z3D4 SNORA9.2-201ENST00000365361 133 ntBASIC2.92□□□□□ -1.94
LYSMD3Q7Z3D4 Y_RNA.448-201ENST00000384185 108 ntBASIC2.92□□□□□ -1.94
LYSMD3Q7Z3D4 RNU6-950P-201ENST00000384651 107 ntBASIC2.92□□□□□ -1.94
LYSMD3Q7Z3D4 Y_RNA.565-201ENST00000384719 101 ntBASIC2.92□□□□□ -1.94
LYSMD3Q7Z3D4 RNU6-1031P-201ENST00000384773 107 ntBASIC2.92□□□□□ -1.94
LYSMD3Q7Z3D4 MIR519C-201ENST00000385053 87 ntBASIC2.92□□□□□ -1.94
LYSMD3Q7Z3D4 MIR887-201ENST00000401258 79 ntBASIC2.92□□□□□ -1.94
LYSMD3Q7Z3D4 RPL23AP94-201ENST00000512518 302 ntBASIC2.92□□□□□ -1.94
LYSMD3Q7Z3D4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.92□□□□□ -1.94
LYSMD3Q7Z3D4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
LYSMD3Q7Z3D4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.92□□□□□ -1.94
LYSMD3Q7Z3D4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
LYSMD3Q7Z3D4 RNU6-865P-201ENST00000364772 107 ntBASIC2.91□□□□□ -1.94
LYSMD3Q7Z3D4 U8.9-201ENST00000365667 134 ntBASIC2.91□□□□□ -1.94
LYSMD3Q7Z3D4 RNU6-851P-201ENST00000384565 107 ntBASIC2.91□□□□□ -1.94
LYSMD3Q7Z3D4 EEF1A1P41-201ENST00000414667 207 ntBASIC2.91□□□□□ -1.94
LYSMD3Q7Z3D4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.91□□□□□ -1.94
LYSMD3Q7Z3D4 SNORD67.1-201ENST00000516618 108 ntBASIC2.91□□□□□ -1.94
LYSMD3Q7Z3D4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.91□□□□□ -1.94
LYSMD3Q7Z3D4 AC020891.4-201ENST00000605745 93 ntBASIC2.91□□□□□ -1.94
LYSMD3Q7Z3D4 MIR8055-201ENST00000610739 97 ntBASIC2.91□□□□□ -1.94
LYSMD3Q7Z3D4 AC022202.1-201ENST00000613515 211 ntBASIC2.91□□□□□ -1.94
LYSMD3Q7Z3D4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.91□□□□□ -1.94
LYSMD3Q7Z3D4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
LYSMD3Q7Z3D4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.91□□□□□ -1.94
LYSMD3Q7Z3D4 BX510359.4-201ENST00000423750 193 ntBASIC2.9□□□□□ -1.95
LYSMD3Q7Z3D4 AC104332.2-201ENST00000429959 156 ntBASIC2.9□□□□□ -1.95
LYSMD3Q7Z3D4 AL139132.1-201ENST00000431587 344 ntBASIC2.9□□□□□ -1.95
LYSMD3Q7Z3D4 SPINT5P-201ENST00000448174 155 ntBASIC2.9□□□□□ -1.95
LYSMD3Q7Z3D4 AL513043.2-201ENST00000573941 143 ntBASIC2.9□□□□□ -1.95
LYSMD3Q7Z3D4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LYSMD3Q7Z3D4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
LYSMD3Q7Z3D4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
LYSMD3Q7Z3D4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.89□□□□□ -1.95
LYSMD3Q7Z3D4 AP000648.3-201ENST00000623539 4507 ntBASIC2.89□□□□□ -1.95
LYSMD3Q7Z3D4 Y_RNA.537-201ENST00000384626 109 ntBASIC2.89□□□□□ -1.95
LYSMD3Q7Z3D4 MIR526A1-201ENST00000384897 85 ntBASIC2.89□□□□□ -1.95
LYSMD3Q7Z3D4 RNU6-1321P-201ENST00000390905 107 ntBASIC2.89□□□□□ -1.95
LYSMD3Q7Z3D4 RPS29P6-201ENST00000438196 145 ntBASIC2.89□□□□□ -1.95
LYSMD3Q7Z3D4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.89□□□□□ -1.95
LYSMD3Q7Z3D4 AC145423.2-201ENST00000610631 239 ntBASIC2.89□□□□□ -1.95
LYSMD3Q7Z3D4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LYSMD3Q7Z3D4 AC009487.2-201ENST00000420969 6821 ntBASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 RNU6-1086P-201ENST00000410930 100 ntBASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 snoU13.16-201ENST00000459350 104 ntBASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 RNU7-79P-201ENST00000516082 62 ntBASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 AC140658.3-201ENST00000567603 271 ntBASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 RPL12P50-201ENST00000603116 116 ntBASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 AC006023.1-201ENST00000603944 259 ntBASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 AL033523.1-201ENST00000605153 153 ntBASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 AC105081.1-201ENST00000617727 106 ntBASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 MIR8065-201ENST00000620577 100 ntBASIC2.88□□□□□ -1.95
LYSMD3Q7Z3D4 AC108206.1-201ENST00000570186 4159 ntBASIC2.87□□□□□ -1.95
LYSMD3Q7Z3D4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
LYSMD3Q7Z3D4 Y_RNA.173-201ENST00000363776 113 ntBASIC2.87□□□□□ -1.95
LYSMD3Q7Z3D4 MIR181B2-201ENST00000385004 89 ntBASIC2.87□□□□□ -1.95
LYSMD3Q7Z3D4 MIR29C-201ENST00000385231 88 ntBASIC2.87□□□□□ -1.95
LYSMD3Q7Z3D4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
LYSMD3Q7Z3D4 SNORD88.1-201ENST00000408684 91 ntBASIC2.87□□□□□ -1.95
LYSMD3Q7Z3D4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.87□□□□□ -1.95
LYSMD3Q7Z3D4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.87□□□□□ -1.95
LYSMD3Q7Z3D4 AC012676.2-201ENST00000619258 186 ntBASIC2.87□□□□□ -1.95
LYSMD3Q7Z3D4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LYSMD3Q7Z3D4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.86□□□□□ -1.95
LYSMD3Q7Z3D4 SNORD115-37-201ENST00000363768 82 ntBASIC2.86□□□□□ -1.95
LYSMD3Q7Z3D4 RNU6-1067P-201ENST00000384752 107 ntBASIC2.86□□□□□ -1.95
LYSMD3Q7Z3D4 RNU7-137P-201ENST00000516788 62 ntBASIC2.86□□□□□ -1.95
LYSMD3Q7Z3D4 FAM106DP-201ENST00000586416 501 ntBASIC2.86□□□□□ -1.95
LYSMD3Q7Z3D4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.86□□□□□ -1.95
LYSMD3Q7Z3D4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.86□□□□□ -1.95
LYSMD3Q7Z3D4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.86□□□□□ -1.95
LYSMD3Q7Z3D4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
LYSMD3Q7Z3D4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LYSMD3Q7Z3D4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.85□□□□□ -1.95
LYSMD3Q7Z3D4 SNORD114-10-201ENST00000363409 72 ntBASIC2.85□□□□□ -1.95
LYSMD3Q7Z3D4 RNA5SP138-201ENST00000365098 114 ntBASIC2.85□□□□□ -1.95
LYSMD3Q7Z3D4 RNU1-109P-201ENST00000383960 147 ntBASIC2.85□□□□□ -1.95
LYSMD3Q7Z3D4 MIR512-1-201ENST00000384913 84 ntBASIC2.85□□□□□ -1.95
LYSMD3Q7Z3D4 MIR597-201ENST00000384968 97 ntBASIC2.85□□□□□ -1.95
LYSMD3Q7Z3D4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.85□□□□□ -1.95
LYSMD3Q7Z3D4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms