Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RNA5SP356-201ENST00000515972 94 ntBASIC2.96□□□□□ -1.94
FOXR1Q6PIV2 RNU6-523P-201ENST00000516304 54 ntBASIC2.96□□□□□ -1.94
FOXR1Q6PIV2 RNA5SP168-201ENST00000516642 112 ntBASIC2.96□□□□□ -1.94
FOXR1Q6PIV2 MIR4672-201ENST00000583126 81 ntBASIC2.96□□□□□ -1.94
FOXR1Q6PIV2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.96□□□□□ -1.94
FOXR1Q6PIV2 RN7SL853P-201ENST00000617250 223 ntBASIC2.96□□□□□ -1.94
FOXR1Q6PIV2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.96□□□□□ -1.94
FOXR1Q6PIV2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
FOXR1Q6PIV2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
FOXR1Q6PIV2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 RNU6-478P-201ENST00000363904 110 ntBASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 RNA5SP126-201ENST00000365092 109 ntBASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 SEM1P1-201ENST00000506694 209 ntBASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 RNU7-53P-201ENST00000516705 60 ntBASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 DNAJC19P9-201ENST00000555084 351 ntBASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 MIR548AR-201ENST00000582191 57 ntBASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 AC105081.1-201ENST00000617727 106 ntBASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.95□□□□□ -1.94
FOXR1Q6PIV2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.94□□□□□ -1.94
FOXR1Q6PIV2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
FOXR1Q6PIV2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
FOXR1Q6PIV2 SNORA24-201ENST00000384096 131 ntBASIC2.94□□□□□ -1.94
FOXR1Q6PIV2 Y_RNA.448-201ENST00000384185 108 ntBASIC2.94□□□□□ -1.94
FOXR1Q6PIV2 Z98742.3-201ENST00000418637 326 ntBASIC2.94□□□□□ -1.94
FOXR1Q6PIV2 SNORD67.1-201ENST00000516618 108 ntBASIC2.94□□□□□ -1.94
FOXR1Q6PIV2 SNORD59.2-201ENST00000516873 68 ntBASIC2.94□□□□□ -1.94
FOXR1Q6PIV2 U4atac.1-201ENST00000618345 95 ntBASIC2.94□□□□□ -1.94
FOXR1Q6PIV2 AC010297.1-201ENST00000623948 149 ntBASIC2.94□□□□□ -1.94
FOXR1Q6PIV2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
FOXR1Q6PIV2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
FOXR1Q6PIV2 RNU6-833P-201ENST00000363486 107 ntBASIC2.93□□□□□ -1.94
FOXR1Q6PIV2 SNORA54-201ENST00000384281 123 ntBASIC2.93□□□□□ -1.94
FOXR1Q6PIV2 MIR181B2-201ENST00000385004 89 ntBASIC2.93□□□□□ -1.94
FOXR1Q6PIV2 RN7SKP220-201ENST00000410611 288 ntBASIC2.93□□□□□ -1.94
FOXR1Q6PIV2 AC003685.2-201ENST00000422795 395 ntBASIC2.93□□□□□ -1.94
FOXR1Q6PIV2 SPINT5P-201ENST00000448174 155 ntBASIC2.93□□□□□ -1.94
FOXR1Q6PIV2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.93□□□□□ -1.94
FOXR1Q6PIV2 U7.4-201ENST00000614961 63 ntBASIC2.93□□□□□ -1.94
FOXR1Q6PIV2 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.93□□□□□ -1.94
FOXR1Q6PIV2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
FOXR1Q6PIV2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
FOXR1Q6PIV2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
FOXR1Q6PIV2 SNORD115-3-201ENST00000363100 82 ntBASIC2.92□□□□□ -1.94
FOXR1Q6PIV2 RNU6-23P-201ENST00000363283 107 ntBASIC2.92□□□□□ -1.94
FOXR1Q6PIV2 SNORA1.2-201ENST00000365189 134 ntBASIC2.92□□□□□ -1.94
FOXR1Q6PIV2 RNU6-1321P-201ENST00000390905 107 ntBASIC2.92□□□□□ -1.94
FOXR1Q6PIV2 AC245047.7-201ENST00000440265 293 ntBASIC2.92□□□□□ -1.94
FOXR1Q6PIV2 RNU7-12P-201ENST00000516030 62 ntBASIC2.92□□□□□ -1.94
FOXR1Q6PIV2 RNU6-90P-201ENST00000606352 106 ntBASIC2.92□□□□□ -1.94
FOXR1Q6PIV2 SNORA28-201ENST00000606769 126 ntBASIC2.92□□□□□ -1.94
FOXR1Q6PIV2 AC243994.1-201ENST00000618627 109 ntBASIC2.92□□□□□ -1.94
FOXR1Q6PIV2 Y_RNA.57-201ENST00000362806 113 ntBASIC2.91□□□□□ -1.94
FOXR1Q6PIV2 SNORA70.7-201ENST00000384159 133 ntBASIC2.91□□□□□ -1.94
FOXR1Q6PIV2 Y_RNA.545-201ENST00000384652 105 ntBASIC2.91□□□□□ -1.94
FOXR1Q6PIV2 RNU1-101P-201ENST00000391171 127 ntBASIC2.91□□□□□ -1.94
FOXR1Q6PIV2 AL450471.1-201ENST00000447509 127 ntBASIC2.91□□□□□ -1.94
FOXR1Q6PIV2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.91□□□□□ -1.94
FOXR1Q6PIV2 RNU7-73P-201ENST00000458743 63 ntBASIC2.91□□□□□ -1.94
FOXR1Q6PIV2 RNU7-35P-201ENST00000517174 62 ntBASIC2.91□□□□□ -1.94
FOXR1Q6PIV2 MIR622-201ENST00000638396 96 ntBASIC2.91□□□□□ -1.94
FOXR1Q6PIV2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
FOXR1Q6PIV2 Y_RNA.173-201ENST00000363776 113 ntBASIC2.9□□□□□ -1.95
FOXR1Q6PIV2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.9□□□□□ -1.95
FOXR1Q6PIV2 AC114801.3-201ENST00000510231 177 ntBASIC2.9□□□□□ -1.95
FOXR1Q6PIV2 MIR4319-201ENST00000577285 85 ntBASIC2.9□□□□□ -1.95
FOXR1Q6PIV2 AL137847.3-201ENST00000611521 109 ntBASIC2.9□□□□□ -1.95
FOXR1Q6PIV2 AC022202.1-201ENST00000613515 211 ntBASIC2.9□□□□□ -1.95
FOXR1Q6PIV2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
FOXR1Q6PIV2 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.89□□□□□ -1.95
FOXR1Q6PIV2 RNA5SP261-201ENST00000410536 106 ntBASIC2.89□□□□□ -1.95
FOXR1Q6PIV2 AC087499.7-201ENST00000441958 109 ntBASIC2.89□□□□□ -1.95
FOXR1Q6PIV2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.89□□□□□ -1.95
FOXR1Q6PIV2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.89□□□□□ -1.95
FOXR1Q6PIV2 AC012676.2-201ENST00000619258 186 ntBASIC2.89□□□□□ -1.95
FOXR1Q6PIV2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.89□□□□□ -1.95
FOXR1Q6PIV2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
FOXR1Q6PIV2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.89□□□□□ -1.95
FOXR1Q6PIV2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
FOXR1Q6PIV2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.89□□□□□ -1.95
FOXR1Q6PIV2 RNA5SP139-201ENST00000364340 117 ntBASIC2.88□□□□□ -1.95
FOXR1Q6PIV2 DEFA7P-201ENST00000382676 285 ntBASIC2.88□□□□□ -1.95
FOXR1Q6PIV2 RNU6-1086P-201ENST00000410930 100 ntBASIC2.88□□□□□ -1.95
FOXR1Q6PIV2 AL139132.1-201ENST00000431587 344 ntBASIC2.88□□□□□ -1.95
FOXR1Q6PIV2 SNORD123-201ENST00000459473 70 ntBASIC2.88□□□□□ -1.95
FOXR1Q6PIV2 AC003982.1-202ENST00000469928 248 ntBASIC2.88□□□□□ -1.95
FOXR1Q6PIV2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.88□□□□□ -1.95
FOXR1Q6PIV2 RNU7-79P-201ENST00000516082 62 ntBASIC2.88□□□□□ -1.95
FOXR1Q6PIV2 SNORA25.13-201ENST00000516395 103 ntBASIC2.88□□□□□ -1.95
FOXR1Q6PIV2 FAM106DP-201ENST00000586416 501 ntBASIC2.88□□□□□ -1.95
FOXR1Q6PIV2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
FOXR1Q6PIV2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
FOXR1Q6PIV2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
FOXR1Q6PIV2 SNORD115-37-201ENST00000363768 82 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 194.8 ms