Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 Y_RNA.309-201ENST00000365046 111 ntBASIC2.63□□□□□ -1.99
PRPF40BQ6NWY9 SNORA70.7-201ENST00000384159 133 ntBASIC2.63□□□□□ -1.99
PRPF40BQ6NWY9 Y_RNA.495-201ENST00000384435 112 ntBASIC2.63□□□□□ -1.99
PRPF40BQ6NWY9 MIR1302-5-201ENST00000408164 150 ntBASIC2.63□□□□□ -1.99
PRPF40BQ6NWY9 AC093850.1-201ENST00000454121 251 ntBASIC2.63□□□□□ -1.99
PRPF40BQ6NWY9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.63□□□□□ -1.99
PRPF40BQ6NWY9 AC104435.1-201ENST00000483483 166 ntBASIC2.63□□□□□ -1.99
PRPF40BQ6NWY9 SNORA31.25-201ENST00000517242 134 ntBASIC2.63□□□□□ -1.99
PRPF40BQ6NWY9 MIR4498-201ENST00000577599 66 ntBASIC2.63□□□□□ -1.99
PRPF40BQ6NWY9 MIR3683-201ENST00000580847 82 ntBASIC2.63□□□□□ -1.99
PRPF40BQ6NWY9 AC021506.2-201ENST00000612354 169 ntBASIC2.63□□□□□ -1.99
PRPF40BQ6NWY9 AL035470.1-201ENST00000622571 220 ntBASIC2.63□□□□□ -1.99
PRPF40BQ6NWY9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PRPF40BQ6NWY9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.62□□□□□ -1.99
PRPF40BQ6NWY9 RNU6-554P-201ENST00000410466 106 ntBASIC2.62□□□□□ -1.99
PRPF40BQ6NWY9 AC108729.3-201ENST00000513484 108 ntBASIC2.62□□□□□ -1.99
PRPF40BQ6NWY9 RNA5SP445-201ENST00000515889 115 ntBASIC2.62□□□□□ -1.99
PRPF40BQ6NWY9 RNU7-193P-201ENST00000516723 65 ntBASIC2.62□□□□□ -1.99
PRPF40BQ6NWY9 RNU6-537P-201ENST00000517277 103 ntBASIC2.62□□□□□ -1.99
PRPF40BQ6NWY9 HSPE1P19-201ENST00000603327 295 ntBASIC2.62□□□□□ -1.99
PRPF40BQ6NWY9 AL513423.1-201ENST00000621695 132 ntBASIC2.62□□□□□ -1.99
PRPF40BQ6NWY9 SNORD3E-202ENST00000627253 216 ntBASIC2.62□□□□□ -1.99
PRPF40BQ6NWY9 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.62□□□□□ -1.99
PRPF40BQ6NWY9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
PRPF40BQ6NWY9 MIRLET7G-201ENST00000362280 84 ntBASIC2.61□□□□□ -1.99
PRPF40BQ6NWY9 Y_RNA.163-201ENST00000363702 113 ntBASIC2.61□□□□□ -1.99
PRPF40BQ6NWY9 Y_RNA.362-201ENST00000365518 110 ntBASIC2.61□□□□□ -1.99
PRPF40BQ6NWY9 RNU6-106P-201ENST00000384405 107 ntBASIC2.61□□□□□ -1.99
PRPF40BQ6NWY9 Y_RNA.508-201ENST00000384502 114 ntBASIC2.61□□□□□ -1.99
PRPF40BQ6NWY9 PGBD4P5-201ENST00000445958 426 ntBASIC2.61□□□□□ -1.99
PRPF40BQ6NWY9 RNU2-11P-201ENST00000459191 187 ntBASIC2.61□□□□□ -1.99
PRPF40BQ6NWY9 MIR3163-201ENST00000581592 73 ntBASIC2.61□□□□□ -1.99
PRPF40BQ6NWY9 MIR4781-201ENST00000585250 76 ntBASIC2.61□□□□□ -1.99
PRPF40BQ6NWY9 Y_RNA.370-201ENST00000365589 108 ntBASIC2.6□□□□□ -1.99
PRPF40BQ6NWY9 RNU6-296P-201ENST00000384608 107 ntBASIC2.6□□□□□ -1.99
PRPF40BQ6NWY9 MIR583-201ENST00000384846 75 ntBASIC2.6□□□□□ -1.99
PRPF40BQ6NWY9 MIR660-201ENST00000385235 97 ntBASIC2.6□□□□□ -1.99
PRPF40BQ6NWY9 MIR524-201ENST00000385242 87 ntBASIC2.6□□□□□ -1.99
PRPF40BQ6NWY9 RNA5SP450-201ENST00000411206 102 ntBASIC2.6□□□□□ -1.99
PRPF40BQ6NWY9 AL022718.1-201ENST00000412004 84 ntBASIC2.6□□□□□ -1.99
PRPF40BQ6NWY9 RPL39P34-201ENST00000477141 156 ntBASIC2.6□□□□□ -1.99
PRPF40BQ6NWY9 RNU6-1053P-201ENST00000515930 101 ntBASIC2.6□□□□□ -1.99
PRPF40BQ6NWY9 ZNF355P-201ENST00000427301 3216 ntBASIC2.59□□□□□ -1.99
PRPF40BQ6NWY9 RNU6-1298P-201ENST00000362456 101 ntBASIC2.59□□□□□ -1.99
PRPF40BQ6NWY9 Y_RNA.43-201ENST00000362670 111 ntBASIC2.59□□□□□ -1.99
PRPF40BQ6NWY9 SUMO1P4-201ENST00000429430 302 ntBASIC2.59□□□□□ -1.99
PRPF40BQ6NWY9 RNA5SP82-201ENST00000516707 92 ntBASIC2.59□□□□□ -1.99
PRPF40BQ6NWY9 AC022523.2-201ENST00000561045 150 ntBASIC2.59□□□□□ -1.99
PRPF40BQ6NWY9 AC245884.12-201ENST00000615364 59 ntBASIC2.59□□□□□ -1.99
PRPF40BQ6NWY9 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.59□□□□□ -1.99
PRPF40BQ6NWY9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.58□□□□□ -2
PRPF40BQ6NWY9 RNU6-1014P-201ENST00000383940 103 ntBASIC2.58□□□□□ -2
PRPF40BQ6NWY9 RNU6-756P-201ENST00000383997 107 ntBASIC2.58□□□□□ -2
PRPF40BQ6NWY9 Y_RNA.494-201ENST00000384432 111 ntBASIC2.58□□□□□ -2
PRPF40BQ6NWY9 AC245517.4-201ENST00000448601 281 ntBASIC2.58□□□□□ -2
PRPF40BQ6NWY9 RNU7-67P-201ENST00000459003 62 ntBASIC2.58□□□□□ -2
PRPF40BQ6NWY9 Y_RNA.677-201ENST00000516401 85 ntBASIC2.58□□□□□ -2
PRPF40BQ6NWY9 RNU2-35P-201ENST00000516446 142 ntBASIC2.58□□□□□ -2
PRPF40BQ6NWY9 RNU7-53P-201ENST00000516705 60 ntBASIC2.58□□□□□ -2
PRPF40BQ6NWY9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.58□□□□□ -2
PRPF40BQ6NWY9 MIR5002-201ENST00000584713 97 ntBASIC2.58□□□□□ -2
PRPF40BQ6NWY9 AC106754.2-201ENST00000623006 233 ntBASIC2.58□□□□□ -2
PRPF40BQ6NWY9 AC021613.1-201ENST00000623880 111 ntBASIC2.58□□□□□ -2
PRPF40BQ6NWY9 SNORA51.5-201ENST00000384126 131 ntBASIC2.57□□□□□ -2
PRPF40BQ6NWY9 Y_RNA.466-201ENST00000384294 113 ntBASIC2.57□□□□□ -2
PRPF40BQ6NWY9 SNORA48.3-201ENST00000391081 134 ntBASIC2.57□□□□□ -2
PRPF40BQ6NWY9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.57□□□□□ -2
PRPF40BQ6NWY9 AC108667.1-201ENST00000428618 249 ntBASIC2.57□□□□□ -2
PRPF40BQ6NWY9 Y_RNA.783-201ENST00000613546 102 ntBASIC2.57□□□□□ -2
PRPF40BQ6NWY9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PRPF40BQ6NWY9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.56□□□□□ -2
PRPF40BQ6NWY9 Y_RNA.355-201ENST00000365462 98 ntBASIC2.56□□□□□ -2
PRPF40BQ6NWY9 MIR548D2-201ENST00000384955 97 ntBASIC2.56□□□□□ -2
PRPF40BQ6NWY9 SNORA17.3-201ENST00000391159 129 ntBASIC2.56□□□□□ -2
PRPF40BQ6NWY9 RNA5SP144-201ENST00000410846 116 ntBASIC2.56□□□□□ -2
PRPF40BQ6NWY9 RNA5SP57-201ENST00000459463 123 ntBASIC2.56□□□□□ -2
PRPF40BQ6NWY9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.56□□□□□ -2
PRPF40BQ6NWY9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.56□□□□□ -2
PRPF40BQ6NWY9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.56□□□□□ -2
PRPF40BQ6NWY9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PRPF40BQ6NWY9 RNU6-766P-201ENST00000362478 107 ntBASIC2.55□□□□□ -2
PRPF40BQ6NWY9 RNU6-1113P-201ENST00000384348 107 ntBASIC2.55□□□□□ -2
PRPF40BQ6NWY9 RNU6-1104P-201ENST00000384723 104 ntBASIC2.55□□□□□ -2
PRPF40BQ6NWY9 MT-TI-201ENST00000387365 69 ntBASIC2.55□□□□□ -2
PRPF40BQ6NWY9 AC019129.1-201ENST00000403786 261 ntBASIC2.55□□□□□ -2
PRPF40BQ6NWY9 AC099513.1-201ENST00000490423 301 ntBASIC2.55□□□□□ -2
PRPF40BQ6NWY9 RNU7-6P-201ENST00000516845 62 ntBASIC2.55□□□□□ -2
PRPF40BQ6NWY9 RNU6-958P-201ENST00000516995 106 ntBASIC2.55□□□□□ -2
PRPF40BQ6NWY9 RNU2-19P-201ENST00000517288 84 ntBASIC2.55□□□□□ -2
PRPF40BQ6NWY9 MIR5194-201ENST00000582634 120 ntBASIC2.55□□□□□ -2
PRPF40BQ6NWY9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
PRPF40BQ6NWY9 MIR424-201ENST00000362227 98 ntBASIC2.54□□□□□ -2
PRPF40BQ6NWY9 RNU6-1255P-201ENST00000363434 112 ntBASIC2.54□□□□□ -2
PRPF40BQ6NWY9 Y_RNA.323-201ENST00000365157 109 ntBASIC2.54□□□□□ -2
PRPF40BQ6NWY9 RNU6-1067P-201ENST00000384752 107 ntBASIC2.54□□□□□ -2
PRPF40BQ6NWY9 MIR144-201ENST00000384886 86 ntBASIC2.54□□□□□ -2
PRPF40BQ6NWY9 SNORA40.18-201ENST00000391200 128 ntBASIC2.54□□□□□ -2
PRPF40BQ6NWY9 RPS29P29-201ENST00000456396 171 ntBASIC2.54□□□□□ -2
PRPF40BQ6NWY9 SNORD123-201ENST00000459473 70 ntBASIC2.54□□□□□ -2
PRPF40BQ6NWY9 Y_RNA.694-201ENST00000516677 117 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms