Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTCRAQ6ISU1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTCRAQ6ISU1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PTCRAQ6ISU1 AC093850.1-201ENST00000454121 251 ntBASIC3.1□□□□□ -1.91
PTCRAQ6ISU1 RNA5SP24-201ENST00000516478 95 ntBASIC3.1□□□□□ -1.91
PTCRAQ6ISU1 SCARNA16.3-201ENST00000516595 184 ntBASIC3.1□□□□□ -1.91
PTCRAQ6ISU1 AC140658.3-201ENST00000567603 271 ntBASIC3.1□□□□□ -1.91
PTCRAQ6ISU1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PTCRAQ6ISU1 Z97988.1-201ENST00000637697 135 ntBASIC3.1□□□□□ -1.91
PTCRAQ6ISU1 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.1□□□□□ -1.91
PTCRAQ6ISU1 AP000648.3-201ENST00000623539 4507 ntBASIC3.09□□□□□ -1.91
PTCRAQ6ISU1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
PTCRAQ6ISU1 AP006437.1-201ENST00000641440 3685 ntBASIC3.09□□□□□ -1.91
PTCRAQ6ISU1 RNU6-315P-201ENST00000362666 107 ntBASIC3.09□□□□□ -1.91
PTCRAQ6ISU1 U8.2-201ENST00000363156 134 ntBASIC3.09□□□□□ -1.91
PTCRAQ6ISU1 MIR889-201ENST00000401280 79 ntBASIC3.09□□□□□ -1.91
PTCRAQ6ISU1 AC234781.5-201ENST00000508429 271 ntBASIC3.09□□□□□ -1.91
PTCRAQ6ISU1 SNORD67.1-201ENST00000516618 108 ntBASIC3.09□□□□□ -1.91
PTCRAQ6ISU1 AL513043.2-201ENST00000573941 143 ntBASIC3.09□□□□□ -1.91
PTCRAQ6ISU1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.09□□□□□ -1.91
PTCRAQ6ISU1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.09□□□□□ -1.91
PTCRAQ6ISU1 MIR30E-201ENST00000362104 92 ntBASIC3.08□□□□□ -1.92
PTCRAQ6ISU1 RNU6-602P-201ENST00000411155 105 ntBASIC3.08□□□□□ -1.92
PTCRAQ6ISU1 HMGN1P33-201ENST00000432945 451 ntBASIC3.08□□□□□ -1.92
PTCRAQ6ISU1 U7.4-201ENST00000614961 63 ntBASIC3.08□□□□□ -1.92
PTCRAQ6ISU1 MIR8065-201ENST00000620577 100 ntBASIC3.08□□□□□ -1.92
PTCRAQ6ISU1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
PTCRAQ6ISU1 MIR520A-201ENST00000384862 85 ntBASIC3.07□□□□□ -1.92
PTCRAQ6ISU1 MIR660-201ENST00000385235 97 ntBASIC3.07□□□□□ -1.92
PTCRAQ6ISU1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PTCRAQ6ISU1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.07□□□□□ -1.92
PTCRAQ6ISU1 RNU7-48P-201ENST00000458875 63 ntBASIC3.07□□□□□ -1.92
PTCRAQ6ISU1 MTND5P40-201ENST00000559945 246 ntBASIC3.07□□□□□ -1.92
PTCRAQ6ISU1 SNORD53-201ENST00000579969 78 ntBASIC3.07□□□□□ -1.92
PTCRAQ6ISU1 AC012676.2-201ENST00000619258 186 ntBASIC3.07□□□□□ -1.92
PTCRAQ6ISU1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.07□□□□□ -1.92
PTCRAQ6ISU1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.07□□□□□ -1.92
PTCRAQ6ISU1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTCRAQ6ISU1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
PTCRAQ6ISU1 AC005336.3-201ENST00000623833 2679 ntBASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 RNU6-1229P-201ENST00000364295 107 ntBASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 RNA5SP138-201ENST00000365098 114 ntBASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 Y_RNA.565-201ENST00000384719 101 ntBASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 RNU6-1321P-201ENST00000390905 107 ntBASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 RNU11-3P-201ENST00000391111 133 ntBASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 BX510359.4-201ENST00000423750 193 ntBASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 RPL23AP6-201ENST00000446637 472 ntBASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 snoU13.15-201ENST00000459407 104 ntBASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 RNU7-137P-201ENST00000516788 62 ntBASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 SNORA74.3-201ENST00000517108 154 ntBASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.06□□□□□ -1.92
PTCRAQ6ISU1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTCRAQ6ISU1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTCRAQ6ISU1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTCRAQ6ISU1 RNU6-859P-201ENST00000362728 107 ntBASIC3.05□□□□□ -1.92
PTCRAQ6ISU1 Y_RNA.545-201ENST00000384652 105 ntBASIC3.05□□□□□ -1.92
PTCRAQ6ISU1 MIR526A1-201ENST00000384897 85 ntBASIC3.05□□□□□ -1.92
PTCRAQ6ISU1 MIR181B2-201ENST00000385004 89 ntBASIC3.05□□□□□ -1.92
PTCRAQ6ISU1 AC006483.1-201ENST00000487308 313 ntBASIC3.05□□□□□ -1.92
PTCRAQ6ISU1 MIR3126-201ENST00000577443 74 ntBASIC3.05□□□□□ -1.92
PTCRAQ6ISU1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PTCRAQ6ISU1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.04□□□□□ -1.92
PTCRAQ6ISU1 AC073325.2-201ENST00000339545 159 ntBASIC3.04□□□□□ -1.92
PTCRAQ6ISU1 Y_RNA.168-201ENST00000363740 102 ntBASIC3.04□□□□□ -1.92
PTCRAQ6ISU1 MIR1236-201ENST00000408340 102 ntBASIC3.04□□□□□ -1.92
PTCRAQ6ISU1 RNU2-7P-201ENST00000410794 178 ntBASIC3.04□□□□□ -1.92
PTCRAQ6ISU1 RNU7-43P-201ENST00000516554 64 ntBASIC3.04□□□□□ -1.92
PTCRAQ6ISU1 RNA5SP481-201ENST00000516814 122 ntBASIC3.04□□□□□ -1.92
PTCRAQ6ISU1 MIR2276-201ENST00000516886 89 ntBASIC3.04□□□□□ -1.92
PTCRAQ6ISU1 SNORD14A-201ENST00000606526 91 ntBASIC3.04□□□□□ -1.92
PTCRAQ6ISU1 AC021506.2-201ENST00000612354 169 ntBASIC3.04□□□□□ -1.92
PTCRAQ6ISU1 AP001362.1-201ENST00000625165 124 ntBASIC3.04□□□□□ -1.92
PTCRAQ6ISU1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PTCRAQ6ISU1 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PTCRAQ6ISU1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.03□□□□□ -1.92
PTCRAQ6ISU1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTCRAQ6ISU1 AC092435.3-201ENST00000565538 3654 ntBASIC3.03□□□□□ -1.92
PTCRAQ6ISU1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTCRAQ6ISU1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
PTCRAQ6ISU1 MIR627-201ENST00000384979 97 ntBASIC3.03□□□□□ -1.92
PTCRAQ6ISU1 RNU6-519P-201ENST00000410590 108 ntBASIC3.03□□□□□ -1.92
PTCRAQ6ISU1 Y_RNA.676-201ENST00000516393 96 ntBASIC3.03□□□□□ -1.92
PTCRAQ6ISU1 RNA5SP137-201ENST00000516833 135 ntBASIC3.03□□□□□ -1.92
PTCRAQ6ISU1 MIR4709-201ENST00000577272 72 ntBASIC3.03□□□□□ -1.92
PTCRAQ6ISU1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTCRAQ6ISU1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.03□□□□□ -1.92
PTCRAQ6ISU1 MAPK10-362ENST00000641864 4484 ntBASIC3.03□□□□□ -1.93
PTCRAQ6ISU1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PTCRAQ6ISU1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
PTCRAQ6ISU1 RNA5SP68-201ENST00000363885 119 ntBASIC3.02□□□□□ -1.93
PTCRAQ6ISU1 SNORA9.2-201ENST00000365361 133 ntBASIC3.02□□□□□ -1.93
PTCRAQ6ISU1 RNU6-129P-201ENST00000391022 107 ntBASIC3.02□□□□□ -1.93
PTCRAQ6ISU1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.02□□□□□ -1.93
PTCRAQ6ISU1 MIR6817-201ENST00000615588 66 ntBASIC3.02□□□□□ -1.93
PTCRAQ6ISU1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.02□□□□□ -1.93
PTCRAQ6ISU1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms