Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 Y_RNA.298-201ENST00000364960 107 ntBASIC2.12□□□□□ -2.07
E4F1Q66K89 RNA5SP259-201ENST00000365541 109 ntBASIC2.12□□□□□ -2.07
E4F1Q66K89 SNORA22-201ENST00000383907 134 ntBASIC2.12□□□□□ -2.07
E4F1Q66K89 RNU7-45P-201ENST00000459460 63 ntBASIC2.12□□□□□ -2.07
E4F1Q66K89 MIR4305-201ENST00000583252 102 ntBASIC2.12□□□□□ -2.07
E4F1Q66K89 AL773524.1-201ENST00000614065 229 ntBASIC2.12□□□□□ -2.07
E4F1Q66K89 MIR6873-201ENST00000622788 63 ntBASIC2.12□□□□□ -2.07
E4F1Q66K89 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
E4F1Q66K89 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.12□□□□□ -2.07
E4F1Q66K89 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
E4F1Q66K89 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
E4F1Q66K89 RNU6-880P-201ENST00000384526 107 ntBASIC2.11□□□□□ -2.07
E4F1Q66K89 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
E4F1Q66K89 SNORA3.2-201ENST00000408221 125 ntBASIC2.11□□□□□ -2.07
E4F1Q66K89 AC244636.1-201ENST00000421152 228 ntBASIC2.11□□□□□ -2.07
E4F1Q66K89 RPL23AP6-201ENST00000446637 472 ntBASIC2.11□□□□□ -2.07
E4F1Q66K89 RPS29P29-201ENST00000456396 171 ntBASIC2.11□□□□□ -2.07
E4F1Q66K89 RNU7-123P-201ENST00000515911 60 ntBASIC2.11□□□□□ -2.07
E4F1Q66K89 RNU6-917P-201ENST00000516294 104 ntBASIC2.11□□□□□ -2.07
E4F1Q66K89 RNU6-589P-201ENST00000516485 107 ntBASIC2.11□□□□□ -2.07
E4F1Q66K89 AC243994.1-201ENST00000618627 109 ntBASIC2.11□□□□□ -2.07
E4F1Q66K89 ZNF658B-202ENST00000615961 3375 ntBASIC2.11□□□□□ -2.07
E4F1Q66K89 RNU6-1067P-201ENST00000384752 107 ntBASIC2.1□□□□□ -2.07
E4F1Q66K89 MIR194-1-201ENST00000384892 85 ntBASIC2.1□□□□□ -2.07
E4F1Q66K89 MIR513A1-201ENST00000385138 129 ntBASIC2.1□□□□□ -2.07
E4F1Q66K89 MIR759-201ENST00000390224 91 ntBASIC2.1□□□□□ -2.07
E4F1Q66K89 RN7SKP223-201ENST00000410582 62 ntBASIC2.1□□□□□ -2.07
E4F1Q66K89 RNU7-53P-201ENST00000516705 60 ntBASIC2.1□□□□□ -2.07
E4F1Q66K89 SNORA74.3-201ENST00000517108 154 ntBASIC2.1□□□□□ -2.07
E4F1Q66K89 AC012493.3-201ENST00000604494 112 ntBASIC2.1□□□□□ -2.07
E4F1Q66K89 MIR4791-201ENST00000607666 84 ntBASIC2.1□□□□□ -2.07
E4F1Q66K89 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.1□□□□□ -2.07
E4F1Q66K89 AC008555.8-201ENST00000623602 2168 ntBASIC2.09□□□□□ -2.07
E4F1Q66K89 MIR449A-201ENST00000362113 91 ntBASIC2.09□□□□□ -2.07
E4F1Q66K89 Y_RNA.213-201ENST00000364178 111 ntBASIC2.09□□□□□ -2.07
E4F1Q66K89 RNU2-40P-201ENST00000410833 196 ntBASIC2.09□□□□□ -2.07
E4F1Q66K89 Z98742.3-201ENST00000418637 326 ntBASIC2.09□□□□□ -2.07
E4F1Q66K89 JTBP1-201ENST00000441314 247 ntBASIC2.09□□□□□ -2.07
E4F1Q66K89 PDCD5P2-201ENST00000507570 312 ntBASIC2.09□□□□□ -2.07
E4F1Q66K89 SNORA31.4-201ENST00000516049 129 ntBASIC2.09□□□□□ -2.07
E4F1Q66K89 RNU2-35P-201ENST00000516446 142 ntBASIC2.09□□□□□ -2.07
E4F1Q66K89 MIR1273D-201ENST00000577266 86 ntBASIC2.09□□□□□ -2.07
E4F1Q66K89 AC021613.1-201ENST00000623880 111 ntBASIC2.09□□□□□ -2.07
E4F1Q66K89 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.08□□□□□ -2.08
E4F1Q66K89 AC092881.1-201ENST00000638218 2733 ntBASIC2.08□□□□□ -2.08
E4F1Q66K89 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
E4F1Q66K89 Y_RNA.198-201ENST00000364013 98 ntBASIC2.08□□□□□ -2.08
E4F1Q66K89 RPS27P21-201ENST00000486977 252 ntBASIC2.08□□□□□ -2.08
E4F1Q66K89 AC022523.2-201ENST00000561045 150 ntBASIC2.08□□□□□ -2.08
E4F1Q66K89 AC007012.1-201ENST00000567192 175 ntBASIC2.08□□□□□ -2.08
E4F1Q66K89 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
E4F1Q66K89 SNORD48-201ENST00000364953 64 ntBASIC2.07□□□□□ -2.08
E4F1Q66K89 SNORA51.10-201ENST00000384418 136 ntBASIC2.07□□□□□ -2.08
E4F1Q66K89 Y_RNA.500-201ENST00000384466 111 ntBASIC2.07□□□□□ -2.08
E4F1Q66K89 AL022718.1-201ENST00000412004 84 ntBASIC2.07□□□□□ -2.08
E4F1Q66K89 AC063976.4-201ENST00000421971 163 ntBASIC2.07□□□□□ -2.08
E4F1Q66K89 AL356320.1-201ENST00000429616 163 ntBASIC2.07□□□□□ -2.08
E4F1Q66K89 SNORA59A-201ENST00000459326 152 ntBASIC2.07□□□□□ -2.08
E4F1Q66K89 UBE2DNL-203ENST00000474922 222 ntBASIC2.07□□□□□ -2.08
E4F1Q66K89 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.07□□□□□ -2.08
E4F1Q66K89 RNU6-322P-201ENST00000516010 103 ntBASIC2.07□□□□□ -2.08
E4F1Q66K89 MIR4299-201ENST00000577899 72 ntBASIC2.07□□□□□ -2.08
E4F1Q66K89 MIR3683-201ENST00000580847 82 ntBASIC2.07□□□□□ -2.08
E4F1Q66K89 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.07□□□□□ -2.08
E4F1Q66K89 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
E4F1Q66K89 RNU6-153P-201ENST00000364422 104 ntBASIC2.06□□□□□ -2.08
E4F1Q66K89 MIR520C-201ENST00000385005 87 ntBASIC2.06□□□□□ -2.08
E4F1Q66K89 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
E4F1Q66K89 RNA5SP144-201ENST00000410846 116 ntBASIC2.06□□□□□ -2.08
E4F1Q66K89 RNU2-13P-201ENST00000515909 113 ntBASIC2.06□□□□□ -2.08
E4F1Q66K89 MIR4764-201ENST00000580680 88 ntBASIC2.06□□□□□ -2.08
E4F1Q66K89 MIR4713-201ENST00000582691 75 ntBASIC2.06□□□□□ -2.08
E4F1Q66K89 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.06□□□□□ -2.08
E4F1Q66K89 RNU6-661P-201ENST00000362409 107 ntBASIC2.05□□□□□ -2.08
E4F1Q66K89 Y_RNA.537-201ENST00000384626 109 ntBASIC2.05□□□□□ -2.08
E4F1Q66K89 RNU6-1104P-201ENST00000384723 104 ntBASIC2.05□□□□□ -2.08
E4F1Q66K89 MIR17-201ENST00000385012 84 ntBASIC2.05□□□□□ -2.08
E4F1Q66K89 RNU6-913P-201ENST00000390913 95 ntBASIC2.05□□□□□ -2.08
E4F1Q66K89 AL451046.2-201ENST00000403074 277 ntBASIC2.05□□□□□ -2.08
E4F1Q66K89 RNU6-1190P-201ENST00000410811 104 ntBASIC2.05□□□□□ -2.08
E4F1Q66K89 AL161935.2-201ENST00000414627 60 ntBASIC2.05□□□□□ -2.08
E4F1Q66K89 RNU7-43P-201ENST00000516554 64 ntBASIC2.05□□□□□ -2.08
E4F1Q66K89 MIR514B-201ENST00000516774 80 ntBASIC2.05□□□□□ -2.08
E4F1Q66K89 AC022254.1-201ENST00000567857 235 ntBASIC2.05□□□□□ -2.08
E4F1Q66K89 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.05□□□□□ -2.08
E4F1Q66K89 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.05□□□□□ -2.08
E4F1Q66K89 MIR3152-201ENST00000579801 74 ntBASIC2.05□□□□□ -2.08
E4F1Q66K89 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.05□□□□□ -2.08
E4F1Q66K89 AC008133.2-201ENST00000624540 351 ntBASIC2.05□□□□□ -2.08
E4F1Q66K89 MIR219B-201ENST00000637023 88 ntBASIC2.05□□□□□ -2.08
E4F1Q66K89 SNORA24-201ENST00000384096 131 ntBASIC2.04□□□□□ -2.08
E4F1Q66K89 Y_RNA.549-201ENST00000384657 102 ntBASIC2.04□□□□□ -2.08
E4F1Q66K89 MT-TI-201ENST00000387365 69 ntBASIC2.04□□□□□ -2.08
E4F1Q66K89 AC003989.2-201ENST00000440224 169 ntBASIC2.04□□□□□ -2.08
E4F1Q66K89 RNU6-922P-201ENST00000516753 99 ntBASIC2.04□□□□□ -2.08
E4F1Q66K89 SNORA63.5-201ENST00000363548 123 ntBASIC2.03□□□□□ -2.08
E4F1Q66K89 SNORD12C-201ENST00000386307 89 ntBASIC2.03□□□□□ -2.08
E4F1Q66K89 RNU6-1319P-201ENST00000390855 104 ntBASIC2.03□□□□□ -2.08
E4F1Q66K89 RNU6-747P-201ENST00000390928 104 ntBASIC2.03□□□□□ -2.08
E4F1Q66K89 RNU6-241P-201ENST00000391148 104 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 201.2 ms