Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 Y_RNA.660-201ENST00000516002 120 ntBASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 SNORD67.1-201ENST00000516618 108 ntBASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 MTND5P40-201ENST00000559945 246 ntBASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 AC027279.3-201ENST00000625055 122 ntBASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 U6.111-201ENST00000636093 83 ntBASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RSPO4Q2I0M5 Y_RNA.118-201ENST00000363300 101 ntBASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 RNU1-23P-201ENST00000363361 144 ntBASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 RNU6-1321P-201ENST00000390905 107 ntBASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 RNU6-141P-201ENST00000410499 105 ntBASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 RNU2-48P-201ENST00000410694 191 ntBASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 AL159169.1-201ENST00000421119 127 ntBASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 CST2P1-201ENST00000425770 87 ntBASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 HMGN2P3-201ENST00000433603 273 ntBASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 HMGN2P5-201ENST00000436882 273 ntBASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 AL606517.2-201ENST00000442855 241 ntBASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 RN7SL636P-201ENST00000497504 294 ntBASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 SEM1P1-201ENST00000506694 209 ntBASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 AL020996.3-201ENST00000606617 222 ntBASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 AC007318.2-201ENST00000620999 243 ntBASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RSPO4Q2I0M5 MAPK10-322ENST00000641485 4530 ntBASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 AC108206.1-201ENST00000570186 4159 ntBASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 MAPK10-362ENST00000641864 4484 ntBASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 RNA5SP139-201ENST00000364340 117 ntBASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 SNORA25.9-201ENST00000365087 128 ntBASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 SNORA24-201ENST00000384096 131 ntBASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 Y_RNA.508-201ENST00000384502 114 ntBASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 RNU6-540P-201ENST00000384622 101 ntBASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 RNU6-913P-201ENST00000390913 95 ntBASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 MIR1287-201ENST00000408492 90 ntBASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 RNU6-807P-201ENST00000516805 107 ntBASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 MIR4796-201ENST00000580742 81 ntBASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 MIR4484-201ENST00000582855 83 ntBASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 GABRG2-229ENST00000641017 3628 ntBASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
RSPO4Q2I0M5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNA5SP289-201ENST00000362332 137 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNU1-101P-201ENST00000391171 127 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNU6-587P-201ENST00000391282 106 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNU6-447P-201ENST00000410293 104 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNU6-1118P-201ENST00000410382 104 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNU6-1076P-201ENST00000410397 104 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNU6-355P-201ENST00000410427 104 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNU6-791P-201ENST00000410467 104 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNU6-705P-201ENST00000410601 104 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNU6-1100P-201ENST00000410691 104 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNU4-53P-201ENST00000410828 140 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNU6-860P-201ENST00000410860 104 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNU6-1217P-201ENST00000411276 104 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNU6-785P-201ENST00000411324 104 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 AC245047.7-201ENST00000440265 293 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 AL031183.1-201ENST00000457667 207 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNU7-73P-201ENST00000458743 63 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 FGF7P7-201ENST00000514120 227 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 RNU6-1108P-201ENST00000516308 104 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 U6.90-201ENST00000614007 104 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 MIR5739-201ENST00000619803 80 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 U6.70-201ENST00000620287 104 ntBASIC2.73□□□□□ -1.97
RSPO4Q2I0M5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RSPO4Q2I0M5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.72□□□□□ -1.97
RSPO4Q2I0M5 RNU5F-1-201ENST00000362507 117 ntBASIC2.72□□□□□ -1.97
RSPO4Q2I0M5 SNORD114-30-201ENST00000364448 72 ntBASIC2.72□□□□□ -1.97
RSPO4Q2I0M5 MIR95-201ENST00000385072 81 ntBASIC2.72□□□□□ -1.97
RSPO4Q2I0M5 FO393413.1-201ENST00000402892 195 ntBASIC2.72□□□□□ -1.97
RSPO4Q2I0M5 RNA5SP21-201ENST00000410917 96 ntBASIC2.72□□□□□ -1.97
RSPO4Q2I0M5 STAG3L5P-204ENST00000443759 179 ntBASIC2.72□□□□□ -1.97
RSPO4Q2I0M5 RNU7-48P-201ENST00000458875 63 ntBASIC2.72□□□□□ -1.97
RSPO4Q2I0M5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.72□□□□□ -1.97
RSPO4Q2I0M5 SCARNA11.3-201ENST00000517276 130 ntBASIC2.72□□□□□ -1.97
RSPO4Q2I0M5 AC105081.1-201ENST00000617727 106 ntBASIC2.72□□□□□ -1.97
RSPO4Q2I0M5 MIR1297-201ENST00000637311 77 ntBASIC2.72□□□□□ -1.97
RSPO4Q2I0M5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.72□□□□□ -1.97
RSPO4Q2I0M5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.71□□□□□ -1.97
RSPO4Q2I0M5 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
RSPO4Q2I0M5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RSPO4Q2I0M5 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RSPO4Q2I0M5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RSPO4Q2I0M5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
RSPO4Q2I0M5 MIR148B-201ENST00000362252 99 ntBASIC2.71□□□□□ -1.98
RSPO4Q2I0M5 Y_RNA.98-201ENST00000363109 102 ntBASIC2.71□□□□□ -1.98
RSPO4Q2I0M5 SNORD114-10-201ENST00000363409 72 ntBASIC2.71□□□□□ -1.98
RSPO4Q2I0M5 SNORD114-6-201ENST00000364393 72 ntBASIC2.71□□□□□ -1.98
RSPO4Q2I0M5 MIR635-201ENST00000384830 98 ntBASIC2.71□□□□□ -1.98
RSPO4Q2I0M5 RN7SKP223-201ENST00000410582 62 ntBASIC2.71□□□□□ -1.98
RSPO4Q2I0M5 RNU6-602P-201ENST00000411155 105 ntBASIC2.71□□□□□ -1.98
RSPO4Q2I0M5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.71□□□□□ -1.98
RSPO4Q2I0M5 ARF4P2-201ENST00000430209 526 ntBASIC2.71□□□□□ -1.98
RSPO4Q2I0M5 MICF-203ENST00000432679 129 ntBASIC2.71□□□□□ -1.98
RSPO4Q2I0M5 AC006539.3-201ENST00000454258 129 ntBASIC2.71□□□□□ -1.98
RSPO4Q2I0M5 RN7SL330P-201ENST00000469709 307 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 254.6 ms