Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.85□□□□□ -2.27
CKAP4Q07065 AF228730.3-201ENST00000436691 102 ntBASIC0.85□□□□□ -2.27
CKAP4Q07065 SNORD116-25-201ENST00000516517 92 ntBASIC0.85□□□□□ -2.27
CKAP4Q07065 RN7SKP88-201ENST00000516847 250 ntBASIC0.85□□□□□ -2.27
CKAP4Q07065 AP003716.2-201ENST00000528260 108 ntBASIC0.85□□□□□ -2.27
CKAP4Q07065 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CKAP4Q07065 AL365205.2-201ENST00000594586 68 ntBASIC0.85□□□□□ -2.27
CKAP4Q07065 SNORD115-40-201ENST00000606510 82 ntBASIC0.85□□□□□ -2.27
CKAP4Q07065 7SK.8-201ENST00000612110 250 ntBASIC0.85□□□□□ -2.27
CKAP4Q07065 7SK.11-201ENST00000615477 250 ntBASIC0.85□□□□□ -2.27
CKAP4Q07065 AL353997.5-201ENST00000618886 171 ntBASIC0.85□□□□□ -2.27
CKAP4Q07065 7SK.13-201ENST00000622040 250 ntBASIC0.85□□□□□ -2.27
CKAP4Q07065 Y_RNA.370-201ENST00000365589 108 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 RNU6-597P-201ENST00000365620 102 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 RNU6-1292P-201ENST00000383856 107 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 Y_RNA.441-201ENST00000384123 112 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 SNORA25-201ENST00000384384 134 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 Y_RNA.494-201ENST00000384432 111 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 Y_RNA.537-201ENST00000384626 109 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
CKAP4Q07065 MIR764-201ENST00000390811 85 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 SNORD77.3-201ENST00000391113 65 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 RNU5E-9P-201ENST00000411164 104 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.84□□□□□ -2.27
CKAP4Q07065 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.84□□□□□ -2.27
CKAP4Q07065 MTND5P15-201ENST00000434246 349 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 RPL39P39-201ENST00000455840 151 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 snoU13.23-201ENST00000458863 104 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 RPS26P48-201ENST00000491713 339 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 RNU7-41P-201ENST00000515917 61 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 RNU6-861P-201ENST00000516745 106 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 RNU6-182P-201ENST00000516970 105 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 AL020996.3-201ENST00000606617 222 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 FTX_2.1-201ENST00000618816 94 ntBASIC0.84□□□□□ -2.27
CKAP4Q07065 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.84□□□□□ -2.27
CKAP4Q07065 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.28
CKAP4Q07065 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
CKAP4Q07065 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CKAP4Q07065 RNU4-84P-201ENST00000364200 139 ntBASIC0.83□□□□□ -2.28
CKAP4Q07065 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
CKAP4Q07065 SNORA40.5-201ENST00000391061 128 ntBASIC0.83□□□□□ -2.28
CKAP4Q07065 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.83□□□□□ -2.28
CKAP4Q07065 SEPT7P4-201ENST00000437076 306 ntBASIC0.83□□□□□ -2.28
CKAP4Q07065 AC245047.7-201ENST00000440265 293 ntBASIC0.83□□□□□ -2.28
CKAP4Q07065 SNORA18.4-201ENST00000516440 124 ntBASIC0.83□□□□□ -2.28
CKAP4Q07065 RNU7-121P-201ENST00000516604 62 ntBASIC0.83□□□□□ -2.28
CKAP4Q07065 SNORD36C-201ENST00000516733 66 ntBASIC0.83□□□□□ -2.28
CKAP4Q07065 AP003484.1-201ENST00000530974 250 ntBASIC0.83□□□□□ -2.28
CKAP4Q07065 PRELID3BP2-201ENST00000605362 201 ntBASIC0.83□□□□□ -2.28
CKAP4Q07065 AC008133.2-201ENST00000624540 351 ntBASIC0.83□□□□□ -2.28
CKAP4Q07065 MIR376A2-201ENST00000636782 80 ntBASIC0.83□□□□□ -2.28
CKAP4Q07065 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
CKAP4Q07065 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CKAP4Q07065 RNA5SP48-201ENST00000363969 126 ntBASIC0.82□□□□□ -2.28
CKAP4Q07065 RNU6-1067P-201ENST00000384752 107 ntBASIC0.82□□□□□ -2.28
CKAP4Q07065 RNU6-907P-201ENST00000390924 102 ntBASIC0.82□□□□□ -2.28
CKAP4Q07065 PCNPP3-201ENST00000393579 471 ntBASIC0.82□□□□□ -2.28
CKAP4Q07065 RNU6-1135P-201ENST00000411083 103 ntBASIC0.82□□□□□ -2.28
CKAP4Q07065 AC006461.1-201ENST00000412637 326 ntBASIC0.82□□□□□ -2.28
CKAP4Q07065 AC108667.1-201ENST00000428618 249 ntBASIC0.82□□□□□ -2.28
CKAP4Q07065 AC048334.1-201ENST00000477975 159 ntBASIC0.82□□□□□ -2.28
CKAP4Q07065 AC107027.2-201ENST00000512197 115 ntBASIC0.82□□□□□ -2.28
CKAP4Q07065 Y_RNA.662-201ENST00000516028 97 ntBASIC0.82□□□□□ -2.28
CKAP4Q07065 SNORA31.4-201ENST00000516049 129 ntBASIC0.82□□□□□ -2.28
CKAP4Q07065 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.82□□□□□ -2.28
CKAP4Q07065 AL022345.2-201ENST00000606307 135 ntBASIC0.82□□□□□ -2.28
CKAP4Q07065 MIR4791-201ENST00000607666 84 ntBASIC0.82□□□□□ -2.28
CKAP4Q07065 Y_RNA.241-201ENST00000364470 117 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 Y_RNA.363-201ENST00000365529 113 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 RNU6-1189P-201ENST00000383958 107 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 Y_RNA.440-201ENST00000384120 114 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 SNORA27-201ENST00000384323 126 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 MIR624-201ENST00000385217 97 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 RNU6-239P-201ENST00000390990 99 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 MIR1302-7-201ENST00000408841 72 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 POLR2J4-204ENST00000418424 324 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 AL392103.1-201ENST00000447000 198 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 RNU6-947P-201ENST00000516264 106 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 MIR3129-201ENST00000581095 76 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 MIR4661-201ENST00000582720 75 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 MIR5197-201ENST00000583721 112 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 AC098479.1-201ENST00000609225 154 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 AC106800.4-201ENST00000614905 153 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 MIR4251-201ENST00000635819 61 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
CKAP4Q07065 MIR378A-201ENST00000362177 66 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 RNA5SP264-201ENST00000363115 107 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 Y_RNA.337-201ENST00000365312 102 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 Y_RNA.393-201ENST00000383936 102 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 RNU6-886P-201ENST00000384319 105 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 SNORA51.10-201ENST00000384418 136 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 Y_RNA.555-201ENST00000384673 110 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 RNU6-768P-201ENST00000384683 107 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 MIR570-201ENST00000384917 97 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 RNA5SP127-201ENST00000411051 133 ntBASIC0.8□□□□□ -2.28
CKAP4Q07065 AC107297.1-201ENST00000459991 176 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms