Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNU6-998P-201ENST00000515894 101 ntBASIC1.49□□□□□ -2.17
RAE1P78406 RNA5SP236-201ENST00000516169 116 ntBASIC1.49□□□□□ -2.17
RAE1P78406 SNORA25.15-201ENST00000516487 89 ntBASIC1.49□□□□□ -2.17
RAE1P78406 RNA5SP48-201ENST00000363969 126 ntBASIC1.48□□□□□ -2.17
RAE1P78406 RNU6-187P-201ENST00000384139 106 ntBASIC1.48□□□□□ -2.17
RAE1P78406 Y_RNA.454-201ENST00000384224 113 ntBASIC1.48□□□□□ -2.17
RAE1P78406 SNORA51.10-201ENST00000384418 136 ntBASIC1.48□□□□□ -2.17
RAE1P78406 MIR613-201ENST00000385248 95 ntBASIC1.48□□□□□ -2.17
RAE1P78406 MTATP6P21-201ENST00000440681 189 ntBASIC1.48□□□□□ -2.17
RAE1P78406 RPS29P29-201ENST00000456396 171 ntBASIC1.48□□□□□ -2.17
RAE1P78406 RNU7-80P-201ENST00000459562 61 ntBASIC1.48□□□□□ -2.17
RAE1P78406 RNU6-902P-201ENST00000517212 91 ntBASIC1.48□□□□□ -2.17
RAE1P78406 RNU2-60P-201ENST00000517290 128 ntBASIC1.48□□□□□ -2.17
RAE1P78406 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
RAE1P78406 MIR3664-201ENST00000579074 99 ntBASIC1.48□□□□□ -2.17
RAE1P78406 MIR4791-201ENST00000607666 84 ntBASIC1.48□□□□□ -2.17
RAE1P78406 AC243994.1-201ENST00000618627 109 ntBASIC1.48□□□□□ -2.17
RAE1P78406 AP001340.1-201ENST00000624405 217 ntBASIC1.48□□□□□ -2.17
RAE1P78406 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
RAE1P78406 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
RAE1P78406 AC010332.2-201ENST00000613083 1904 ntBASIC1.47□□□□□ -2.17
RAE1P78406 U8.1-201ENST00000362843 134 ntBASIC1.47□□□□□ -2.17
RAE1P78406 MIR1323-201ENST00000408090 73 ntBASIC1.47□□□□□ -2.17
RAE1P78406 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.47□□□□□ -2.17
RAE1P78406 AL392103.1-201ENST00000447000 198 ntBASIC1.47□□□□□ -2.17
RAE1P78406 RPL39P39-201ENST00000455840 151 ntBASIC1.47□□□□□ -2.17
RAE1P78406 RNU7-53P-201ENST00000516705 60 ntBASIC1.47□□□□□ -2.17
RAE1P78406 AL512310.8-201ENST00000550183 120 ntBASIC1.47□□□□□ -2.17
RAE1P78406 AL096861.1-201ENST00000610899 123 ntBASIC1.47□□□□□ -2.17
RAE1P78406 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
RAE1P78406 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.17
RAE1P78406 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
RAE1P78406 RNU6-704P-201ENST00000364162 103 ntBASIC1.46□□□□□ -2.18
RAE1P78406 RNU6-915P-201ENST00000364943 103 ntBASIC1.46□□□□□ -2.18
RAE1P78406 Y_RNA.351-201ENST00000365436 96 ntBASIC1.46□□□□□ -2.18
RAE1P78406 SNORD18B-201ENST00000365659 72 ntBASIC1.46□□□□□ -2.18
RAE1P78406 MIR570-201ENST00000384917 97 ntBASIC1.46□□□□□ -2.18
RAE1P78406 MIR320A-201ENST00000385302 82 ntBASIC1.46□□□□□ -2.18
RAE1P78406 AL603914.1-201ENST00000401964 204 ntBASIC1.46□□□□□ -2.18
RAE1P78406 RNU7-41P-201ENST00000515917 61 ntBASIC1.46□□□□□ -2.18
RAE1P78406 RNU7-70P-201ENST00000516941 66 ntBASIC1.46□□□□□ -2.18
RAE1P78406 AP001328.1-201ENST00000528550 176 ntBASIC1.46□□□□□ -2.18
RAE1P78406 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.46□□□□□ -2.18
RAE1P78406 BX248123.2-201ENST00000606318 124 ntBASIC1.46□□□□□ -2.18
RAE1P78406 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.46□□□□□ -2.18
RAE1P78406 AC091932.4-201ENST00000623386 200 ntBASIC1.46□□□□□ -2.18
RAE1P78406 RNU1-133P-201ENST00000364867 167 ntBASIC1.45□□□□□ -2.18
RAE1P78406 AL035398.1-201ENST00000430869 322 ntBASIC1.45□□□□□ -2.18
RAE1P78406 RNU7-73P-201ENST00000458743 63 ntBASIC1.45□□□□□ -2.18
RAE1P78406 RNU7-67P-201ENST00000459003 62 ntBASIC1.45□□□□□ -2.18
RAE1P78406 Y_RNA.686-201ENST00000516548 134 ntBASIC1.45□□□□□ -2.18
RAE1P78406 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.45□□□□□ -2.18
RAE1P78406 U7.2-201ENST00000607576 63 ntBASIC1.45□□□□□ -2.18
RAE1P78406 AL121890.5-201ENST00000620848 304 ntBASIC1.45□□□□□ -2.18
RAE1P78406 MIR7843-201ENST00000622274 79 ntBASIC1.45□□□□□ -2.18
RAE1P78406 MIR4251-201ENST00000635819 61 ntBASIC1.45□□□□□ -2.18
RAE1P78406 RNA5SP190-201ENST00000365222 118 ntBASIC1.44□□□□□ -2.18
RAE1P78406 SNORA20-201ENST00000384662 132 ntBASIC1.44□□□□□ -2.18
RAE1P78406 SNORA40-201ENST00000388090 126 ntBASIC1.44□□□□□ -2.18
RAE1P78406 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
RAE1P78406 MIR1304-201ENST00000408243 91 ntBASIC1.44□□□□□ -2.18
RAE1P78406 RNA5SP272-201ENST00000516095 111 ntBASIC1.44□□□□□ -2.18
RAE1P78406 Y_RNA.690-201ENST00000516603 95 ntBASIC1.44□□□□□ -2.18
RAE1P78406 RNU6-165P-201ENST00000517170 99 ntBASIC1.44□□□□□ -2.18
RAE1P78406 MIR3192-201ENST00000584920 77 ntBASIC1.44□□□□□ -2.18
RAE1P78406 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.44□□□□□ -2.18
RAE1P78406 RNU6-257P-201ENST00000410238 98 ntBASIC1.43□□□□□ -2.18
RAE1P78406 MTND4LP9-201ENST00000427694 174 ntBASIC1.43□□□□□ -2.18
RAE1P78406 TMSB4XP3-201ENST00000445144 114 ntBASIC1.43□□□□□ -2.18
RAE1P78406 RNU2-11P-201ENST00000459191 187 ntBASIC1.43□□□□□ -2.18
RAE1P78406 SNORD13-201ENST00000459299 104 ntBASIC1.43□□□□□ -2.18
RAE1P78406 snoU13.16-201ENST00000459350 104 ntBASIC1.43□□□□□ -2.18
RAE1P78406 RNU6-958P-201ENST00000516995 106 ntBASIC1.43□□□□□ -2.18
RAE1P78406 MIR3124-201ENST00000582636 67 ntBASIC1.43□□□□□ -2.18
RAE1P78406 AP001485.1-201ENST00000604799 199 ntBASIC1.43□□□□□ -2.18
RAE1P78406 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.43□□□□□ -2.18
RAE1P78406 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.43□□□□□ -2.18
RAE1P78406 MIR302B-201ENST00000362188 73 ntBASIC1.42□□□□□ -2.18
RAE1P78406 MIR342-201ENST00000362212 99 ntBASIC1.42□□□□□ -2.18
RAE1P78406 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.42□□□□□ -2.18
RAE1P78406 Y_RNA.586-201ENST00000391146 98 ntBASIC1.42□□□□□ -2.18
RAE1P78406 Y_RNA.692-201ENST00000516627 105 ntBASIC1.42□□□□□ -2.18
RAE1P78406 RNU6-113P-201ENST00000516653 101 ntBASIC1.42□□□□□ -2.18
RAE1P78406 AC011603.4-201ENST00000611325 277 ntBASIC1.42□□□□□ -2.18
RAE1P78406 AL596211.1-201ENST00000569873 2277 ntBASIC1.42□□□□□ -2.18
RAE1P78406 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
RAE1P78406 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.41□□□□□ -2.18
RAE1P78406 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.41□□□□□ -2.18
RAE1P78406 Y_RNA.651-201ENST00000459380 103 ntBASIC1.41□□□□□ -2.18
RAE1P78406 RNU6-947P-201ENST00000516264 106 ntBASIC1.41□□□□□ -2.18
RAE1P78406 RN7SKP88-201ENST00000516847 250 ntBASIC1.41□□□□□ -2.18
RAE1P78406 Y_RNA.757-201ENST00000578934 114 ntBASIC1.41□□□□□ -2.18
RAE1P78406 7SK.8-201ENST00000612110 250 ntBASIC1.41□□□□□ -2.18
RAE1P78406 7SK.11-201ENST00000615477 250 ntBASIC1.41□□□□□ -2.18
RAE1P78406 TUG1_4.1-201ENST00000619464 181 ntBASIC1.41□□□□□ -2.18
RAE1P78406 7SK.13-201ENST00000622040 250 ntBASIC1.41□□□□□ -2.18
RAE1P78406 AC091895.1-201ENST00000624494 256 ntBASIC1.41□□□□□ -2.18
RAE1P78406 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.41□□□□□ -2.18
RAE1P78406 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.41□□□□□ -2.18
RAE1P78406 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms