Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 CYP3A137P-201ENST00000562436 69 ntBASIC0.83□□□□□ -2.28
PEX3P56589 AC243994.1-201ENST00000618627 109 ntBASIC0.83□□□□□ -2.28
PEX3P56589 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
PEX3P56589 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
PEX3P56589 Y_RNA.20-201ENST00000362479 113 ntBASIC0.82□□□□□ -2.28
PEX3P56589 SNORD45.3-201ENST00000363836 72 ntBASIC0.82□□□□□ -2.28
PEX3P56589 Y_RNA.292-201ENST00000364904 97 ntBASIC0.82□□□□□ -2.28
PEX3P56589 SNORD114-24-201ENST00000365029 72 ntBASIC0.82□□□□□ -2.28
PEX3P56589 RNY4P28-201ENST00000365281 93 ntBASIC0.82□□□□□ -2.28
PEX3P56589 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.82□□□□□ -2.28
PEX3P56589 MTND3P2-201ENST00000438452 342 ntBASIC0.82□□□□□ -2.28
PEX3P56589 Y_RNA.679-201ENST00000516416 91 ntBASIC0.82□□□□□ -2.28
PEX3P56589 Y_RNA.680-201ENST00000516441 93 ntBASIC0.82□□□□□ -2.28
PEX3P56589 RNU6-365P-201ENST00000517113 106 ntBASIC0.82□□□□□ -2.28
PEX3P56589 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
PEX3P56589 AC106800.4-201ENST00000614905 153 ntBASIC0.82□□□□□ -2.28
PEX3P56589 MIR6788-201ENST00000618842 66 ntBASIC0.82□□□□□ -2.28
PEX3P56589 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.82□□□□□ -2.28
PEX3P56589 HSBP1P2-201ENST00000299671 229 ntBASIC0.81□□□□□ -2.28
PEX3P56589 Y_RNA.262-201ENST00000364641 102 ntBASIC0.81□□□□□ -2.28
PEX3P56589 Y_RNA.432-201ENST00000384087 111 ntBASIC0.81□□□□□ -2.28
PEX3P56589 MT-TN-201ENST00000387400 73 ntBASIC0.81□□□□□ -2.28
PEX3P56589 RNU4-43P-201ENST00000410628 137 ntBASIC0.81□□□□□ -2.28
PEX3P56589 RNU6-693P-201ENST00000516134 107 ntBASIC0.81□□□□□ -2.28
PEX3P56589 RNU6-561P-201ENST00000516222 102 ntBASIC0.81□□□□□ -2.28
PEX3P56589 RNU6-1299P-201ENST00000516316 100 ntBASIC0.81□□□□□ -2.28
PEX3P56589 SNORD36C-201ENST00000516733 66 ntBASIC0.81□□□□□ -2.28
PEX3P56589 RNU6-1270P-201ENST00000517128 108 ntBASIC0.81□□□□□ -2.28
PEX3P56589 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
PEX3P56589 MIR377-201ENST00000362145 69 ntBASIC0.8□□□□□ -2.28
PEX3P56589 Y_RNA.23-201ENST00000362496 106 ntBASIC0.8□□□□□ -2.28
PEX3P56589 Y_RNA.330-201ENST00000365230 109 ntBASIC0.8□□□□□ -2.28
PEX3P56589 RNU6-1067P-201ENST00000384752 107 ntBASIC0.8□□□□□ -2.28
PEX3P56589 SNORA40.5-201ENST00000391061 128 ntBASIC0.8□□□□□ -2.28
PEX3P56589 AL078595.1-201ENST00000404458 226 ntBASIC0.8□□□□□ -2.28
PEX3P56589 POLR2J4-204ENST00000418424 324 ntBASIC0.8□□□□□ -2.28
PEX3P56589 AF228730.3-201ENST00000436691 102 ntBASIC0.8□□□□□ -2.28
PEX3P56589 RNA5SP255-201ENST00000516370 107 ntBASIC0.8□□□□□ -2.28
PEX3P56589 RNU6-504P-201ENST00000516568 104 ntBASIC0.8□□□□□ -2.28
PEX3P56589 RNU6-197P-201ENST00000516680 100 ntBASIC0.8□□□□□ -2.28
PEX3P56589 AP003484.1-201ENST00000530974 250 ntBASIC0.8□□□□□ -2.28
PEX3P56589 AL353621.2-201ENST00000605340 133 ntBASIC0.8□□□□□ -2.28
PEX3P56589 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
PEX3P56589 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
PEX3P56589 Y_RNA.54-201ENST00000362766 105 ntBASIC0.79□□□□□ -2.28
PEX3P56589 Y_RNA.168-201ENST00000363740 102 ntBASIC0.79□□□□□ -2.28
PEX3P56589 Y_RNA.241-201ENST00000364470 117 ntBASIC0.79□□□□□ -2.28
PEX3P56589 RNU6-580P-201ENST00000365159 107 ntBASIC0.79□□□□□ -2.28
PEX3P56589 Y_RNA.350-201ENST00000365409 98 ntBASIC0.79□□□□□ -2.28
PEX3P56589 SNORA26-201ENST00000391286 122 ntBASIC0.79□□□□□ -2.28
PEX3P56589 MIR1302-3-201ENST00000408128 138 ntBASIC0.79□□□□□ -2.28
PEX3P56589 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.79□□□□□ -2.28
PEX3P56589 Y_RNA.622-201ENST00000411091 108 ntBASIC0.79□□□□□ -2.28
PEX3P56589 AC090844.1-201ENST00000422019 156 ntBASIC0.79□□□□□ -2.28
PEX3P56589 RNU7-73P-201ENST00000458743 63 ntBASIC0.79□□□□□ -2.28
PEX3P56589 snoU13.16-201ENST00000459350 104 ntBASIC0.79□□□□□ -2.28
PEX3P56589 MIR2115-201ENST00000516657 100 ntBASIC0.79□□□□□ -2.28
PEX3P56589 AC023827.1-201ENST00000569247 97 ntBASIC0.79□□□□□ -2.28
PEX3P56589 MIR4503-201ENST00000582187 83 ntBASIC0.79□□□□□ -2.28
PEX3P56589 MIR4661-201ENST00000582720 75 ntBASIC0.79□□□□□ -2.28
PEX3P56589 MIR151B-201ENST00000584249 96 ntBASIC0.79□□□□□ -2.28
PEX3P56589 AC062037.2-201ENST00000610137 73 ntBASIC0.79□□□□□ -2.28
PEX3P56589 AC134878.1-201ENST00000619901 243 ntBASIC0.79□□□□□ -2.28
PEX3P56589 MIR376A2-201ENST00000636782 80 ntBASIC0.79□□□□□ -2.28
PEX3P56589 RNU6-103P-201ENST00000363686 107 ntBASIC0.78□□□□□ -2.28
PEX3P56589 Y_RNA.193-201ENST00000363979 102 ntBASIC0.78□□□□□ -2.28
PEX3P56589 RNY1-201ENST00000364228 113 ntBASIC0.78□□□□□ -2.28
PEX3P56589 Y_RNA.269-201ENST00000364685 89 ntBASIC0.78□□□□□ -2.28
PEX3P56589 RNU1-36P-201ENST00000365130 165 ntBASIC0.78□□□□□ -2.28
PEX3P56589 RNU6-125P-201ENST00000384505 107 ntBASIC0.78□□□□□ -2.28
PEX3P56589 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
PEX3P56589 RNU6-913P-201ENST00000390913 95 ntBASIC0.78□□□□□ -2.28
PEX3P56589 RNA5SP95-201ENST00000410319 137 ntBASIC0.78□□□□□ -2.28
PEX3P56589 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.78□□□□□ -2.28
PEX3P56589 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.78□□□□□ -2.28
PEX3P56589 AL118496.2-201ENST00000448300 230 ntBASIC0.78□□□□□ -2.28
PEX3P56589 PDCD5P2-201ENST00000507570 312 ntBASIC0.78□□□□□ -2.28
PEX3P56589 MIR8055-201ENST00000610739 97 ntBASIC0.78□□□□□ -2.28
PEX3P56589 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.78□□□□□ -2.28
PEX3P56589 RNU6-369P-201ENST00000362515 102 ntBASIC0.77□□□□□ -2.29
PEX3P56589 SNORD113.3-201ENST00000364630 78 ntBASIC0.77□□□□□ -2.29
PEX3P56589 SNORA1-201ENST00000384107 130 ntBASIC0.77□□□□□ -2.29
PEX3P56589 Y_RNA.440-201ENST00000384120 114 ntBASIC0.77□□□□□ -2.29
PEX3P56589 Y_RNA.452-201ENST00000384202 108 ntBASIC0.77□□□□□ -2.29
PEX3P56589 SNORA27-201ENST00000384323 126 ntBASIC0.77□□□□□ -2.29
PEX3P56589 Y_RNA.478-201ENST00000384358 107 ntBASIC0.77□□□□□ -2.29
PEX3P56589 SNORD77.3-201ENST00000391113 65 ntBASIC0.77□□□□□ -2.29
PEX3P56589 SNORD111-201ENST00000408139 94 ntBASIC0.77□□□□□ -2.29
PEX3P56589 RNU2-70P-201ENST00000410718 179 ntBASIC0.77□□□□□ -2.29
PEX3P56589 RPS29P24-201ENST00000486345 171 ntBASIC0.77□□□□□ -2.29
PEX3P56589 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.77□□□□□ -2.29
PEX3P56589 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.77□□□□□ -2.29
PEX3P56589 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
PEX3P56589 RNU6-94P-201ENST00000607728 107 ntBASIC0.77□□□□□ -2.29
PEX3P56589 U4.1-201ENST00000620349 87 ntBASIC0.77□□□□□ -2.29
PEX3P56589 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
PEX3P56589 Y_RNA.60-201ENST00000362831 98 ntBASIC0.76□□□□□ -2.29
PEX3P56589 RNU6-396P-201ENST00000365369 105 ntBASIC0.76□□□□□ -2.29
PEX3P56589 Y_RNA.410-201ENST00000383992 113 ntBASIC0.76□□□□□ -2.29
PEX3P56589 MIR508-201ENST00000384857 115 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 226.7 ms