Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC008133.2-201ENST00000624540 351 ntBASIC1.36□□□□□ -2.19
CDH12P55289 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CDH12P55289 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
CDH12P55289 RPL30P7-201ENST00000479312 323 ntBASIC1.35□□□□□ -2.19
CDH12P55289 RNU6-947P-201ENST00000516264 106 ntBASIC1.35□□□□□ -2.19
CDH12P55289 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
CDH12P55289 RNU2-60P-201ENST00000517290 128 ntBASIC1.35□□□□□ -2.19
CDH12P55289 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.35□□□□□ -2.19
CDH12P55289 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.35□□□□□ -2.19
CDH12P55289 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CDH12P55289 MIR548X2-201ENST00000579776 100 ntBASIC1.35□□□□□ -2.19
CDH12P55289 MIR3133-201ENST00000583157 78 ntBASIC1.35□□□□□ -2.19
CDH12P55289 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CDH12P55289 SNORA24-201ENST00000384096 131 ntBASIC1.34□□□□□ -2.19
CDH12P55289 Y_RNA.537-201ENST00000384626 109 ntBASIC1.34□□□□□ -2.19
CDH12P55289 SUMO1P3-201ENST00000439961 304 ntBASIC1.34□□□□□ -2.19
CDH12P55289 SNORD13-201ENST00000459299 104 ntBASIC1.34□□□□□ -2.19
CDH12P55289 AC107297.1-201ENST00000459991 176 ntBASIC1.34□□□□□ -2.19
CDH12P55289 RPS29P24-201ENST00000486345 171 ntBASIC1.34□□□□□ -2.19
CDH12P55289 RNA5SP272-201ENST00000516095 111 ntBASIC1.34□□□□□ -2.19
CDH12P55289 SNORD53B-201ENST00000577887 78 ntBASIC1.34□□□□□ -2.19
CDH12P55289 AC243994.1-201ENST00000618627 109 ntBASIC1.34□□□□□ -2.19
CDH12P55289 Y_RNA.351-201ENST00000365436 96 ntBASIC1.33□□□□□ -2.2
CDH12P55289 RNU6-746P-201ENST00000384112 109 ntBASIC1.33□□□□□ -2.2
CDH12P55289 Y_RNA.488-201ENST00000384403 102 ntBASIC1.33□□□□□ -2.2
CDH12P55289 Y_RNA.584-201ENST00000391090 114 ntBASIC1.33□□□□□ -2.2
CDH12P55289 SNORA67.6-201ENST00000391093 99 ntBASIC1.33□□□□□ -2.2
CDH12P55289 RNU6-460P-201ENST00000391158 108 ntBASIC1.33□□□□□ -2.2
CDH12P55289 MIR513C-201ENST00000401352 84 ntBASIC1.33□□□□□ -2.2
CDH12P55289 AL354695.1-201ENST00000427935 228 ntBASIC1.33□□□□□ -2.2
CDH12P55289 RPS29P29-201ENST00000456396 171 ntBASIC1.33□□□□□ -2.2
CDH12P55289 RNU6-998P-201ENST00000515894 101 ntBASIC1.33□□□□□ -2.2
CDH12P55289 SNORA31.4-201ENST00000516049 129 ntBASIC1.33□□□□□ -2.2
CDH12P55289 RNA5SP236-201ENST00000516169 116 ntBASIC1.33□□□□□ -2.2
CDH12P55289 CYP3A52P-201ENST00000563326 91 ntBASIC1.33□□□□□ -2.2
CDH12P55289 AL121890.5-201ENST00000620848 304 ntBASIC1.33□□□□□ -2.2
CDH12P55289 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.33□□□□□ -2.2
CDH12P55289 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
CDH12P55289 RNU6-60P-201ENST00000364792 103 ntBASIC1.32□□□□□ -2.2
CDH12P55289 RNU6-187P-201ENST00000384139 106 ntBASIC1.32□□□□□ -2.2
CDH12P55289 SNORA51.10-201ENST00000384418 136 ntBASIC1.32□□□□□ -2.2
CDH12P55289 SNORA20-201ENST00000384662 132 ntBASIC1.32□□□□□ -2.2
CDH12P55289 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.32□□□□□ -2.2
CDH12P55289 RNU7-67P-201ENST00000459003 62 ntBASIC1.32□□□□□ -2.2
CDH12P55289 RNU7-96P-201ENST00000459535 64 ntBASIC1.32□□□□□ -2.2
CDH12P55289 RNU6-426P-201ENST00000516464 97 ntBASIC1.32□□□□□ -2.2
CDH12P55289 Y_RNA.686-201ENST00000516548 134 ntBASIC1.32□□□□□ -2.2
CDH12P55289 Y_RNA.703-201ENST00000516846 111 ntBASIC1.32□□□□□ -2.2
CDH12P55289 RNU6-958P-201ENST00000516995 106 ntBASIC1.32□□□□□ -2.2
CDH12P55289 SNORA31.24-201ENST00000517232 57 ntBASIC1.32□□□□□ -2.2
CDH12P55289 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.32□□□□□ -2.2
CDH12P55289 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
CDH12P55289 MIR4251-201ENST00000635819 61 ntBASIC1.32□□□□□ -2.2
CDH12P55289 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDH12P55289 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDH12P55289 MIR342-201ENST00000362212 99 ntBASIC1.31□□□□□ -2.2
CDH12P55289 RNU6-508P-201ENST00000363231 103 ntBASIC1.31□□□□□ -2.2
CDH12P55289 RNU6-1067P-201ENST00000384752 107 ntBASIC1.31□□□□□ -2.2
CDH12P55289 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.31□□□□□ -2.2
CDH12P55289 RNU6-913P-201ENST00000390913 95 ntBASIC1.31□□□□□ -2.2
CDH12P55289 RN7SKP88-201ENST00000516847 250 ntBASIC1.31□□□□□ -2.2
CDH12P55289 AL645939.4-201ENST00000604495 135 ntBASIC1.31□□□□□ -2.2
CDH12P55289 7SK.8-201ENST00000612110 250 ntBASIC1.31□□□□□ -2.2
CDH12P55289 7SK.11-201ENST00000615477 250 ntBASIC1.31□□□□□ -2.2
CDH12P55289 7SK.13-201ENST00000622040 250 ntBASIC1.31□□□□□ -2.2
CDH12P55289 AC091932.4-201ENST00000623386 200 ntBASIC1.31□□□□□ -2.2
CDH12P55289 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.3□□□□□ -2.2
CDH12P55289 SNORA25.3-201ENST00000363205 127 ntBASIC1.3□□□□□ -2.2
CDH12P55289 Y_RNA.420-201ENST00000384043 110 ntBASIC1.3□□□□□ -2.2
CDH12P55289 SNORA70.7-201ENST00000384159 133 ntBASIC1.3□□□□□ -2.2
CDH12P55289 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.3□□□□□ -2.2
CDH12P55289 AL035398.1-201ENST00000430869 322 ntBASIC1.3□□□□□ -2.2
CDH12P55289 AC009474.2-201ENST00000451383 136 ntBASIC1.3□□□□□ -2.2
CDH12P55289 RPL39P39-201ENST00000455840 151 ntBASIC1.3□□□□□ -2.2
CDH12P55289 RNU2-11P-201ENST00000459191 187 ntBASIC1.3□□□□□ -2.2
CDH12P55289 MIR548AO-201ENST00000579992 96 ntBASIC1.3□□□□□ -2.2
CDH12P55289 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CDH12P55289 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
CDH12P55289 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
CDH12P55289 Y_RNA.120-201ENST00000363304 110 ntBASIC1.29□□□□□ -2.2
CDH12P55289 Y_RNA.568-201ENST00000384742 113 ntBASIC1.29□□□□□ -2.2
CDH12P55289 MIR548M-201ENST00000408260 86 ntBASIC1.29□□□□□ -2.2
CDH12P55289 RNU7-73P-201ENST00000458743 63 ntBASIC1.29□□□□□ -2.2
CDH12P55289 RNU7-80P-201ENST00000459562 61 ntBASIC1.29□□□□□ -2.2
CDH12P55289 AP003716.2-201ENST00000528260 108 ntBASIC1.29□□□□□ -2.2
CDH12P55289 AP001485.1-201ENST00000604799 199 ntBASIC1.29□□□□□ -2.2
CDH12P55289 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CDH12P55289 AL596211.1-201ENST00000569873 2277 ntBASIC1.29□□□□□ -2.2
CDH12P55289 RNA5SP48-201ENST00000363969 126 ntBASIC1.28□□□□□ -2.2
CDH12P55289 RNU6-309P-201ENST00000364573 106 ntBASIC1.28□□□□□ -2.2
CDH12P55289 RNU6-915P-201ENST00000364943 103 ntBASIC1.28□□□□□ -2.2
CDH12P55289 MIR1302-7-201ENST00000408841 72 ntBASIC1.28□□□□□ -2.2
CDH12P55289 RNU6-1190P-201ENST00000410811 104 ntBASIC1.28□□□□□ -2.2
CDH12P55289 RNU6-1054P-201ENST00000411293 104 ntBASIC1.28□□□□□ -2.2
CDH12P55289 Y_RNA.651-201ENST00000459380 103 ntBASIC1.28□□□□□ -2.2
CDH12P55289 AC048334.1-201ENST00000477975 159 ntBASIC1.28□□□□□ -2.2
CDH12P55289 AL133373.1-201ENST00000497098 94 ntBASIC1.28□□□□□ -2.2
CDH12P55289 RNU6-548P-201ENST00000517083 115 ntBASIC1.28□□□□□ -2.2
CDH12P55289 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.28□□□□□ -2.2
CDH12P55289 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms