Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
ATRXP46100 SNORD116-25-201ENST00000516517 92 ntBASIC1.16□□□□□ -2.22
ATRXP46100 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.16□□□□□ -2.22
ATRXP46100 AC100767.1-201ENST00000528178 123 ntBASIC1.16□□□□□ -2.22
ATRXP46100 MIR367-201ENST00000362299 68 ntBASIC1.15□□□□□ -2.22
ATRXP46100 SNORA16B-201ENST00000364674 135 ntBASIC1.15□□□□□ -2.22
ATRXP46100 snoU2-30.1-201ENST00000365012 70 ntBASIC1.15□□□□□ -2.22
ATRXP46100 Y_RNA.630-201ENST00000411370 108 ntBASIC1.15□□□□□ -2.22
ATRXP46100 MIR4636-201ENST00000582271 80 ntBASIC1.15□□□□□ -2.22
ATRXP46100 MIR4762-201ENST00000585261 75 ntBASIC1.15□□□□□ -2.22
ATRXP46100 AC087685.1-201ENST00000587507 141 ntBASIC1.15□□□□□ -2.22
ATRXP46100 AL365222.1-201ENST00000614661 98 ntBASIC1.15□□□□□ -2.22
ATRXP46100 Y_RNA.497-201ENST00000384447 98 ntBASIC1.15□□□□□ -2.23
ATRXP46100 Y_RNA.547-201ENST00000384654 119 ntBASIC1.15□□□□□ -2.23
ATRXP46100 AC055731.1-201ENST00000474387 401 ntBASIC1.15□□□□□ -2.23
ATRXP46100 Y_RNA.686-201ENST00000516548 134 ntBASIC1.15□□□□□ -2.23
ATRXP46100 SNORA18.7-201ENST00000516910 131 ntBASIC1.15□□□□□ -2.23
ATRXP46100 AC022523.2-201ENST00000561045 150 ntBASIC1.15□□□□□ -2.23
ATRXP46100 MIR660-201ENST00000385235 97 ntBASIC1.14□□□□□ -2.23
ATRXP46100 U8.16-201ENST00000391279 133 ntBASIC1.14□□□□□ -2.23
ATRXP46100 Y_RNA.617-201ENST00000410920 90 ntBASIC1.14□□□□□ -2.23
ATRXP46100 STAG3L5P-204ENST00000443759 179 ntBASIC1.14□□□□□ -2.23
ATRXP46100 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.14□□□□□ -2.23
ATRXP46100 snoU13.25-201ENST00000458945 104 ntBASIC1.14□□□□□ -2.23
ATRXP46100 Y_RNA.692-201ENST00000516627 105 ntBASIC1.14□□□□□ -2.23
ATRXP46100 RNU2-56P-201ENST00000516826 190 ntBASIC1.14□□□□□ -2.23
ATRXP46100 SNORA48.11-201ENST00000517015 89 ntBASIC1.14□□□□□ -2.23
ATRXP46100 IGKV1-22-201ENST00000524313 326 ntBASIC1.14□□□□□ -2.23
ATRXP46100 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
ATRXP46100 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
ATRXP46100 SNORA9.1-201ENST00000362412 131 ntBASIC1.14□□□□□ -2.23
ATRXP46100 SNORA3A-201ENST00000364113 130 ntBASIC1.14□□□□□ -2.23
ATRXP46100 RNU6-1138P-201ENST00000365359 106 ntBASIC1.14□□□□□ -2.23
ATRXP46100 RNU6-442P-201ENST00000383968 104 ntBASIC1.14□□□□□ -2.23
ATRXP46100 RNU1-52P-201ENST00000384190 164 ntBASIC1.14□□□□□ -2.23
ATRXP46100 MIR516B2-201ENST00000385190 85 ntBASIC1.14□□□□□ -2.23
ATRXP46100 MIR802-201ENST00000390235 94 ntBASIC1.14□□□□□ -2.23
ATRXP46100 RNA5SP482-201ENST00000391269 118 ntBASIC1.14□□□□□ -2.23
ATRXP46100 Y_RNA.621-201ENST00000411065 96 ntBASIC1.14□□□□□ -2.23
ATRXP46100 RNU1-104P-201ENST00000517280 175 ntBASIC1.14□□□□□ -2.23
ATRXP46100 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.14□□□□□ -2.23
ATRXP46100 AC211469.2-201ENST00000605461 205 ntBASIC1.14□□□□□ -2.23
ATRXP46100 MIR4791-201ENST00000607666 84 ntBASIC1.14□□□□□ -2.23
ATRXP46100 Y_RNA.293-201ENST00000364908 93 ntBASIC1.13□□□□□ -2.23
ATRXP46100 RNU6-424P-201ENST00000384367 105 ntBASIC1.13□□□□□ -2.23
ATRXP46100 MIR1468-201ENST00000410600 86 ntBASIC1.13□□□□□ -2.23
ATRXP46100 PGBD4P5-201ENST00000445958 426 ntBASIC1.13□□□□□ -2.23
ATRXP46100 SNORD36C-201ENST00000516733 66 ntBASIC1.13□□□□□ -2.23
ATRXP46100 AC243994.1-201ENST00000618627 109 ntBASIC1.13□□□□□ -2.23
ATRXP46100 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
ATRXP46100 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.13□□□□□ -2.23
ATRXP46100 SNORA2A-201ENST00000383885 135 ntBASIC1.13□□□□□ -2.23
ATRXP46100 Y_RNA.457-201ENST00000384237 111 ntBASIC1.13□□□□□ -2.23
ATRXP46100 RNU6-1031P-201ENST00000384773 107 ntBASIC1.13□□□□□ -2.23
ATRXP46100 AL034345.1-201ENST00000407768 123 ntBASIC1.13□□□□□ -2.23
ATRXP46100 RNU2-51P-201ENST00000410708 197 ntBASIC1.13□□□□□ -2.23
ATRXP46100 AC099677.2-201ENST00000436385 175 ntBASIC1.13□□□□□ -2.23
ATRXP46100 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.13□□□□□ -2.23
ATRXP46100 RNU6-1234P-201ENST00000516877 103 ntBASIC1.13□□□□□ -2.23
ATRXP46100 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
ATRXP46100 RNU6-832P-201ENST00000363319 107 ntBASIC1.12□□□□□ -2.23
ATRXP46100 RNA5SP205-201ENST00000364653 136 ntBASIC1.12□□□□□ -2.23
ATRXP46100 RNU1-109P-201ENST00000383960 147 ntBASIC1.12□□□□□ -2.23
ATRXP46100 SNORA27-201ENST00000384323 126 ntBASIC1.12□□□□□ -2.23
ATRXP46100 MIR452-201ENST00000385020 85 ntBASIC1.12□□□□□ -2.23
ATRXP46100 RNU4-43P-201ENST00000410628 137 ntBASIC1.12□□□□□ -2.23
ATRXP46100 HMGN2P35-201ENST00000412164 270 ntBASIC1.12□□□□□ -2.23
ATRXP46100 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.12□□□□□ -2.23
ATRXP46100 RNA5SP236-201ENST00000516169 116 ntBASIC1.12□□□□□ -2.23
ATRXP46100 SNORD45.4-201ENST00000516629 73 ntBASIC1.12□□□□□ -2.23
ATRXP46100 RNU6-341P-201ENST00000516973 96 ntBASIC1.12□□□□□ -2.23
ATRXP46100 SNORA31.25-201ENST00000517242 134 ntBASIC1.12□□□□□ -2.23
ATRXP46100 AC015726.2-201ENST00000620112 122 ntBASIC1.12□□□□□ -2.23
ATRXP46100 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
ATRXP46100 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
ATRXP46100 MTND5P32-201ENST00000560711 1802 ntBASIC1.12□□□□□ -2.23
ATRXP46100 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
ATRXP46100 SNORD14E-201ENST00000364009 85 ntBASIC1.12□□□□□ -2.23
ATRXP46100 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.12□□□□□ -2.23
ATRXP46100 snoU13.2-201ENST00000459201 104 ntBASIC1.12□□□□□ -2.23
ATRXP46100 SNORD33.1-201ENST00000516213 88 ntBASIC1.12□□□□□ -2.23
ATRXP46100 RNU6-62P-201ENST00000516526 102 ntBASIC1.12□□□□□ -2.23
ATRXP46100 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.12□□□□□ -2.23
ATRXP46100 AC090821.2-201ENST00000523552 176 ntBASIC1.12□□□□□ -2.23
ATRXP46100 MIR5197-201ENST00000583721 112 ntBASIC1.12□□□□□ -2.23
ATRXP46100 Y_RNA.563-201ENST00000384707 108 ntBASIC1.11□□□□□ -2.23
ATRXP46100 MIR144-201ENST00000384886 86 ntBASIC1.11□□□□□ -2.23
ATRXP46100 RNU7-197P-201ENST00000458836 62 ntBASIC1.11□□□□□ -2.23
ATRXP46100 RNU6-1149P-201ENST00000516810 97 ntBASIC1.11□□□□□ -2.23
ATRXP46100 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.11□□□□□ -2.23
ATRXP46100 AC008555.8-201ENST00000623602 2168 ntBASIC1.11□□□□□ -2.23
ATRXP46100 SNORA63D-201ENST00000364359 132 ntBASIC1.11□□□□□ -2.23
ATRXP46100 RNA5SP323-201ENST00000391094 133 ntBASIC1.11□□□□□ -2.23
ATRXP46100 RNU2-40P-201ENST00000410833 196 ntBASIC1.11□□□□□ -2.23
ATRXP46100 RNA5SP492-201ENST00000411330 114 ntBASIC1.11□□□□□ -2.23
ATRXP46100 RPL30P13-201ENST00000418873 348 ntBASIC1.11□□□□□ -2.23
ATRXP46100 RNU7-96P-201ENST00000459535 64 ntBASIC1.11□□□□□ -2.23
ATRXP46100 MIR378D2-201ENST00000580636 98 ntBASIC1.11□□□□□ -2.23
ATRXP46100 AC010332.2-201ENST00000613083 1904 ntBASIC1.11□□□□□ -2.23
ATRXP46100 Y_RNA.75-201ENST00000362927 97 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms