Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TUG1_4.1-201ENST00000619464 181 ntBASIC1.44□□□□□ -2.18
KRT9P35527 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRT9P35527 MIR539-201ENST00000365690 78 ntBASIC1.43□□□□□ -2.18
KRT9P35527 Y_RNA.420-201ENST00000384043 110 ntBASIC1.43□□□□□ -2.18
KRT9P35527 MIR522-201ENST00000385071 87 ntBASIC1.43□□□□□ -2.18
KRT9P35527 SNORA75.5-201ENST00000391291 81 ntBASIC1.43□□□□□ -2.18
KRT9P35527 MTND4LP9-201ENST00000427694 174 ntBASIC1.43□□□□□ -2.18
KRT9P35527 RPS29P29-201ENST00000456396 171 ntBASIC1.43□□□□□ -2.18
KRT9P35527 RNU6-1211P-201ENST00000459179 105 ntBASIC1.43□□□□□ -2.18
KRT9P35527 RNA5SP153-201ENST00000516498 76 ntBASIC1.43□□□□□ -2.18
KRT9P35527 RNU6-126P-201ENST00000516685 103 ntBASIC1.43□□□□□ -2.18
KRT9P35527 Y_RNA.714-201ENST00000517065 90 ntBASIC1.43□□□□□ -2.18
KRT9P35527 MIR4662B-201ENST00000579498 81 ntBASIC1.43□□□□□ -2.18
KRT9P35527 AL357312.1-201ENST00000603879 298 ntBASIC1.43□□□□□ -2.18
KRT9P35527 AC011603.4-201ENST00000611325 277 ntBASIC1.43□□□□□ -2.18
KRT9P35527 Pinc.1-201ENST00000616452 154 ntBASIC1.43□□□□□ -2.18
KRT9P35527 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRT9P35527 RNU6-597P-201ENST00000365620 102 ntBASIC1.42□□□□□ -2.18
KRT9P35527 Y_RNA.542-201ENST00000384641 111 ntBASIC1.42□□□□□ -2.18
KRT9P35527 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.42□□□□□ -2.18
KRT9P35527 SNORD11-201ENST00000459124 84 ntBASIC1.42□□□□□ -2.18
KRT9P35527 HMGN1P7-201ENST00000491722 313 ntBASIC1.42□□□□□ -2.18
KRT9P35527 SNORD77.4-201ENST00000516158 81 ntBASIC1.42□□□□□ -2.18
KRT9P35527 RNU7-149P-201ENST00000516739 59 ntBASIC1.42□□□□□ -2.18
KRT9P35527 RNU6-971P-201ENST00000516920 106 ntBASIC1.42□□□□□ -2.18
KRT9P35527 AP001328.1-201ENST00000528550 176 ntBASIC1.42□□□□□ -2.18
KRT9P35527 FAM106DP-201ENST00000586416 501 ntBASIC1.42□□□□□ -2.18
KRT9P35527 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.42□□□□□ -2.18
KRT9P35527 Y_RNA.634-201ENST00000364811 113 ntBASIC1.41□□□□□ -2.18
KRT9P35527 RNU6-484P-201ENST00000384016 107 ntBASIC1.41□□□□□ -2.18
KRT9P35527 MIR452-201ENST00000385020 85 ntBASIC1.41□□□□□ -2.18
KRT9P35527 RNU6-1168P-201ENST00000390831 104 ntBASIC1.41□□□□□ -2.18
KRT9P35527 RNU6-460P-201ENST00000391158 108 ntBASIC1.41□□□□□ -2.18
KRT9P35527 SNRPGP10-201ENST00000432323 225 ntBASIC1.41□□□□□ -2.18
KRT9P35527 AC008267.6-201ENST00000441664 139 ntBASIC1.41□□□□□ -2.18
KRT9P35527 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.41□□□□□ -2.18
KRT9P35527 RNU1-123P-201ENST00000458950 160 ntBASIC1.41□□□□□ -2.18
KRT9P35527 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.41□□□□□ -2.18
KRT9P35527 AL133373.1-201ENST00000497098 94 ntBASIC1.41□□□□□ -2.18
KRT9P35527 RNU6-947P-201ENST00000516264 106 ntBASIC1.41□□□□□ -2.18
KRT9P35527 RNU6-365P-201ENST00000517113 106 ntBASIC1.41□□□□□ -2.18
KRT9P35527 AL365222.1-201ENST00000614661 98 ntBASIC1.41□□□□□ -2.18
KRT9P35527 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.41□□□□□ -2.18
KRT9P35527 AP001340.1-201ENST00000624405 217 ntBASIC1.41□□□□□ -2.18
KRT9P35527 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KRT9P35527 Y_RNA.242-201ENST00000364473 110 ntBASIC1.4□□□□□ -2.19
KRT9P35527 RNU6-1082P-201ENST00000364574 107 ntBASIC1.4□□□□□ -2.19
KRT9P35527 SNORA25.8-201ENST00000364831 128 ntBASIC1.4□□□□□ -2.19
KRT9P35527 RNU6-1138P-201ENST00000365359 106 ntBASIC1.4□□□□□ -2.19
KRT9P35527 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
KRT9P35527 Y_RNA.584-201ENST00000391090 114 ntBASIC1.4□□□□□ -2.19
KRT9P35527 AC015922.2-201ENST00000435593 184 ntBASIC1.4□□□□□ -2.19
KRT9P35527 RNU7-197P-201ENST00000458836 62 ntBASIC1.4□□□□□ -2.19
KRT9P35527 SNORA31.2-201ENST00000516019 134 ntBASIC1.4□□□□□ -2.19
KRT9P35527 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.4□□□□□ -2.19
KRT9P35527 Y_RNA.71-201ENST00000362892 104 ntBASIC1.39□□□□□ -2.19
KRT9P35527 RNU6-1290P-201ENST00000362957 109 ntBASIC1.39□□□□□ -2.19
KRT9P35527 Y_RNA.91-201ENST00000363042 107 ntBASIC1.39□□□□□ -2.19
KRT9P35527 RNU6-978P-201ENST00000364371 103 ntBASIC1.39□□□□□ -2.19
KRT9P35527 Y_RNA.336-201ENST00000365307 109 ntBASIC1.39□□□□□ -2.19
KRT9P35527 SNORD18B-201ENST00000365659 72 ntBASIC1.39□□□□□ -2.19
KRT9P35527 Y_RNA.486-201ENST00000384398 107 ntBASIC1.39□□□□□ -2.19
KRT9P35527 SNORA22C-201ENST00000384614 134 ntBASIC1.39□□□□□ -2.19
KRT9P35527 MTATP6P29-201ENST00000415057 132 ntBASIC1.39□□□□□ -2.19
KRT9P35527 RNU4-57P-201ENST00000515980 135 ntBASIC1.39□□□□□ -2.19
KRT9P35527 RNU6-504P-201ENST00000516568 104 ntBASIC1.39□□□□□ -2.19
KRT9P35527 AC090821.2-201ENST00000523552 176 ntBASIC1.39□□□□□ -2.19
KRT9P35527 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.39□□□□□ -2.19
KRT9P35527 Y_RNA.757-201ENST00000578934 114 ntBASIC1.39□□□□□ -2.19
KRT9P35527 AL359881.1-201ENST00000602916 267 ntBASIC1.39□□□□□ -2.19
KRT9P35527 AL022345.2-201ENST00000606307 135 ntBASIC1.39□□□□□ -2.19
KRT9P35527 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRT9P35527 RNU6-1084P-201ENST00000362498 107 ntBASIC1.38□□□□□ -2.19
KRT9P35527 Y_RNA.127-201ENST00000363386 109 ntBASIC1.38□□□□□ -2.19
KRT9P35527 Y_RNA.251-201ENST00000364551 99 ntBASIC1.38□□□□□ -2.19
KRT9P35527 RNU6-915P-201ENST00000364943 103 ntBASIC1.38□□□□□ -2.19
KRT9P35527 SNORD50B-201ENST00000364995 70 ntBASIC1.38□□□□□ -2.19
KRT9P35527 Y_RNA.327-201ENST00000365201 102 ntBASIC1.38□□□□□ -2.19
KRT9P35527 RNU6-1336P-201ENST00000383886 109 ntBASIC1.38□□□□□ -2.19
KRT9P35527 SNORA25-201ENST00000384384 134 ntBASIC1.38□□□□□ -2.19
KRT9P35527 MIR802-201ENST00000390235 94 ntBASIC1.38□□□□□ -2.19
KRT9P35527 RNU6-1054P-201ENST00000411293 104 ntBASIC1.38□□□□□ -2.19
KRT9P35527 RPL39P39-201ENST00000455840 151 ntBASIC1.38□□□□□ -2.19
KRT9P35527 AC048334.1-201ENST00000477975 159 ntBASIC1.38□□□□□ -2.19
KRT9P35527 SNORA18.4-201ENST00000516440 124 ntBASIC1.38□□□□□ -2.19
KRT9P35527 SNORD45.4-201ENST00000516629 73 ntBASIC1.38□□□□□ -2.19
KRT9P35527 MIR4421-201ENST00000578133 69 ntBASIC1.38□□□□□ -2.19
KRT9P35527 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KRT9P35527 U7.2-201ENST00000607576 63 ntBASIC1.38□□□□□ -2.19
KRT9P35527 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.38□□□□□ -2.19
KRT9P35527 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRT9P35527 Y_RNA.261-201ENST00000364631 102 ntBASIC1.37□□□□□ -2.19
KRT9P35527 RNU6-80P-201ENST00000384195 107 ntBASIC1.37□□□□□ -2.19
KRT9P35527 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.37□□□□□ -2.19
KRT9P35527 AC009474.2-201ENST00000451383 136 ntBASIC1.37□□□□□ -2.19
KRT9P35527 AC004223.1-201ENST00000479840 271 ntBASIC1.37□□□□□ -2.19
KRT9P35527 NDUFA4P2-201ENST00000489989 244 ntBASIC1.37□□□□□ -2.19
KRT9P35527 SNORA31.4-201ENST00000516049 129 ntBASIC1.37□□□□□ -2.19
KRT9P35527 RNU6-1333P-201ENST00000516162 93 ntBASIC1.37□□□□□ -2.19
KRT9P35527 SNORD111.1-201ENST00000516421 86 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms