Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.09□□□□□ -2.07
COL6A2P12110 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
COL6A2P12110 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
COL6A2P12110 Y_RNA.528-201ENST00000384575 108 ntBASIC2.08□□□□□ -2.08
COL6A2P12110 MIR548A3-201ENST00000385297 97 ntBASIC2.08□□□□□ -2.08
COL6A2P12110 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
COL6A2P12110 MIR1263-201ENST00000408324 86 ntBASIC2.08□□□□□ -2.08
COL6A2P12110 AC244636.1-201ENST00000421152 228 ntBASIC2.08□□□□□ -2.08
COL6A2P12110 AL035398.1-201ENST00000430869 322 ntBASIC2.08□□□□□ -2.08
COL6A2P12110 JTBP1-201ENST00000441314 247 ntBASIC2.08□□□□□ -2.08
COL6A2P12110 RNU6-589P-201ENST00000516485 107 ntBASIC2.08□□□□□ -2.08
COL6A2P12110 MTND5P34-201ENST00000568888 325 ntBASIC2.08□□□□□ -2.08
COL6A2P12110 MIR548AR-201ENST00000582191 57 ntBASIC2.08□□□□□ -2.08
COL6A2P12110 AL596211.1-201ENST00000569873 2277 ntBASIC2.08□□□□□ -2.08
COL6A2P12110 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
COL6A2P12110 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL6A2P12110 RNU6-661P-201ENST00000362409 107 ntBASIC2.07□□□□□ -2.08
COL6A2P12110 Z98742.3-201ENST00000418637 326 ntBASIC2.07□□□□□ -2.08
COL6A2P12110 snoU13.23-201ENST00000458863 104 ntBASIC2.07□□□□□ -2.08
COL6A2P12110 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.07□□□□□ -2.08
COL6A2P12110 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.07□□□□□ -2.08
COL6A2P12110 SNORA31.4-201ENST00000516049 129 ntBASIC2.07□□□□□ -2.08
COL6A2P12110 FAM106DP-201ENST00000586416 501 ntBASIC2.07□□□□□ -2.08
COL6A2P12110 MIR6129-201ENST00000616087 109 ntBASIC2.07□□□□□ -2.08
COL6A2P12110 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
COL6A2P12110 RNA5SP160-201ENST00000364866 120 ntBASIC2.06□□□□□ -2.08
COL6A2P12110 RNU6-44P-201ENST00000384045 107 ntBASIC2.06□□□□□ -2.08
COL6A2P12110 SNORA70.7-201ENST00000384159 133 ntBASIC2.06□□□□□ -2.08
COL6A2P12110 MIR653-201ENST00000385279 96 ntBASIC2.06□□□□□ -2.08
COL6A2P12110 RNY4P18-201ENST00000391107 89 ntBASIC2.06□□□□□ -2.08
COL6A2P12110 AL356320.1-201ENST00000429616 163 ntBASIC2.06□□□□□ -2.08
COL6A2P12110 Y_RNA.649-201ENST00000459077 103 ntBASIC2.06□□□□□ -2.08
COL6A2P12110 Y_RNA.709-201ENST00000516952 92 ntBASIC2.06□□□□□ -2.08
COL6A2P12110 SNORA74.3-201ENST00000517108 154 ntBASIC2.06□□□□□ -2.08
COL6A2P12110 AL121890.5-201ENST00000620848 304 ntBASIC2.06□□□□□ -2.08
COL6A2P12110 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
COL6A2P12110 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.05□□□□□ -2.08
COL6A2P12110 RNU6-414P-201ENST00000363705 104 ntBASIC2.05□□□□□ -2.08
COL6A2P12110 Y_RNA.537-201ENST00000384626 109 ntBASIC2.05□□□□□ -2.08
COL6A2P12110 RNU6-1067P-201ENST00000384752 107 ntBASIC2.05□□□□□ -2.08
COL6A2P12110 RNU2-40P-201ENST00000410833 196 ntBASIC2.05□□□□□ -2.08
COL6A2P12110 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.05□□□□□ -2.08
COL6A2P12110 RPS29P29-201ENST00000456396 171 ntBASIC2.05□□□□□ -2.08
COL6A2P12110 RNU2-11P-201ENST00000459191 187 ntBASIC2.05□□□□□ -2.08
COL6A2P12110 RNU6-917P-201ENST00000516294 104 ntBASIC2.05□□□□□ -2.08
COL6A2P12110 RNA5SP364-201ENST00000516938 78 ntBASIC2.05□□□□□ -2.08
COL6A2P12110 IGKV3-31-201ENST00000523109 329 ntBASIC2.05□□□□□ -2.08
COL6A2P12110 MIR4713-201ENST00000582691 75 ntBASIC2.05□□□□□ -2.08
COL6A2P12110 MIR4305-201ENST00000583252 102 ntBASIC2.05□□□□□ -2.08
COL6A2P12110 AL096840.1-201ENST00000603287 93 ntBASIC2.05□□□□□ -2.08
COL6A2P12110 AC021443.1-201ENST00000604478 211 ntBASIC2.05□□□□□ -2.08
COL6A2P12110 AC095038.3-201ENST00000634439 195 ntBASIC2.05□□□□□ -2.08
COL6A2P12110 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
COL6A2P12110 MIR302B-201ENST00000362188 73 ntBASIC2.04□□□□□ -2.08
COL6A2P12110 MIR342-201ENST00000362212 99 ntBASIC2.04□□□□□ -2.08
COL6A2P12110 Y_RNA.198-201ENST00000364013 98 ntBASIC2.04□□□□□ -2.08
COL6A2P12110 Y_RNA.298-201ENST00000364960 107 ntBASIC2.04□□□□□ -2.08
COL6A2P12110 SNORD116-21-201ENST00000384507 92 ntBASIC2.04□□□□□ -2.08
COL6A2P12110 MIR570-201ENST00000384917 97 ntBASIC2.04□□□□□ -2.08
COL6A2P12110 SNORD28B-201ENST00000390993 75 ntBASIC2.04□□□□□ -2.08
COL6A2P12110 RNA5SP489-201ENST00000410986 109 ntBASIC2.04□□□□□ -2.08
COL6A2P12110 RNU7-73P-201ENST00000458743 63 ntBASIC2.04□□□□□ -2.08
COL6A2P12110 RNU7-53P-201ENST00000516705 60 ntBASIC2.04□□□□□ -2.08
COL6A2P12110 SUMO2P16-201ENST00000519475 264 ntBASIC2.04□□□□□ -2.08
COL6A2P12110 DEFB122-202ENST00000569013 197 ntBASIC2.04□□□□□ -2.08
COL6A2P12110 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.04□□□□□ -2.08
COL6A2P12110 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.04□□□□□ -2.08
COL6A2P12110 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
COL6A2P12110 SNX2P2-201ENST00000424553 323 ntBASIC2.03□□□□□ -2.08
COL6A2P12110 RPL23AP42-201ENST00000471152 471 ntBASIC2.03□□□□□ -2.08
COL6A2P12110 RNU7-43P-201ENST00000516554 64 ntBASIC2.03□□□□□ -2.08
COL6A2P12110 AC015712.3-201ENST00000559380 164 ntBASIC2.03□□□□□ -2.08
COL6A2P12110 MIR4299-201ENST00000577899 72 ntBASIC2.03□□□□□ -2.08
COL6A2P12110 MIR4648-201ENST00000580107 72 ntBASIC2.03□□□□□ -2.08
COL6A2P12110 RNU6-880P-201ENST00000384526 107 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 RNU6-1319P-201ENST00000390855 104 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 RNU6-747P-201ENST00000390928 104 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 RNU6-241P-201ENST00000391148 104 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 RNU6-177P-201ENST00000411257 104 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 AC063976.4-201ENST00000421971 163 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 RNU7-67P-201ENST00000459003 62 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 RNU7-164P-201ENST00000459221 62 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 AC108210.2-201ENST00000503681 201 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 RNY4P20-201ENST00000516678 93 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 SNORA77B-201ENST00000578179 125 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 MIR3935-201ENST00000583472 104 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 HSPE1P19-201ENST00000603327 295 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 MIR4791-201ENST00000607666 84 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 AC243994.1-201ENST00000618627 109 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 MIR6873-201ENST00000622788 63 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 AC021613.1-201ENST00000623880 111 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.02□□□□□ -2.09
COL6A2P12110 AC092881.1-201ENST00000638218 2733 ntBASIC2.02□□□□□ -2.09
COL6A2P12110 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
COL6A2P12110 RNU6-755P-201ENST00000364400 103 ntBASIC2.01□□□□□ -2.09
COL6A2P12110 RNU6-482P-201ENST00000391068 107 ntBASIC2.01□□□□□ -2.09
COL6A2P12110 AL591806.2-201ENST00000433122 173 ntBASIC2.01□□□□□ -2.09
COL6A2P12110 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL6A2P12110 RNU6-893P-201ENST00000458841 100 ntBASIC2.01□□□□□ -2.09
COL6A2P12110 Y_RNA.676-201ENST00000516393 96 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms