Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.77□□□□□ -2.29
TOP1P11387 RNU7-43P-201ENST00000516554 64 ntBASIC0.77□□□□□ -2.29
TOP1P11387 RNU6-1007P-201ENST00000516586 107 ntBASIC0.77□□□□□ -2.29
TOP1P11387 AC004812.1-201ENST00000540773 146 ntBASIC0.77□□□□□ -2.29
TOP1P11387 MIR3149-201ENST00000584629 83 ntBASIC0.77□□□□□ -2.29
TOP1P11387 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.77□□□□□ -2.29
TOP1P11387 7SK.10-201ENST00000621414 298 ntBASIC0.77□□□□□ -2.29
TOP1P11387 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TOP1P11387 Y_RNA.60-201ENST00000362831 98 ntBASIC0.76□□□□□ -2.29
TOP1P11387 Y_RNA.65-201ENST00000362846 100 ntBASIC0.76□□□□□ -2.29
TOP1P11387 Y_RNA.91-201ENST00000363042 107 ntBASIC0.76□□□□□ -2.29
TOP1P11387 RNA5SP264-201ENST00000363115 107 ntBASIC0.76□□□□□ -2.29
TOP1P11387 SNORA25.3-201ENST00000363205 127 ntBASIC0.76□□□□□ -2.29
TOP1P11387 Y_RNA.144-201ENST00000363521 113 ntBASIC0.76□□□□□ -2.29
TOP1P11387 MIR518F-201ENST00000384973 87 ntBASIC0.76□□□□□ -2.29
TOP1P11387 MIR942-201ENST00000401111 86 ntBASIC0.76□□□□□ -2.29
TOP1P11387 AL606845.1-201ENST00000404881 255 ntBASIC0.76□□□□□ -2.29
TOP1P11387 MIR548O-201ENST00000408583 114 ntBASIC0.76□□□□□ -2.29
TOP1P11387 AL392103.1-201ENST00000447000 198 ntBASIC0.76□□□□□ -2.29
TOP1P11387 AC023449.1-201ENST00000454464 154 ntBASIC0.76□□□□□ -2.29
TOP1P11387 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.76□□□□□ -2.29
TOP1P11387 RNU6-111P-201ENST00000517179 105 ntBASIC0.76□□□□□ -2.29
TOP1P11387 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.76□□□□□ -2.29
TOP1P11387 AC015726.2-201ENST00000620112 122 ntBASIC0.76□□□□□ -2.29
TOP1P11387 Y_RNA.262-201ENST00000364641 102 ntBASIC0.75□□□□□ -2.29
TOP1P11387 Y_RNA.634-201ENST00000364811 113 ntBASIC0.75□□□□□ -2.29
TOP1P11387 RNU6-702P-201ENST00000364982 107 ntBASIC0.75□□□□□ -2.29
TOP1P11387 RNY3P5-201ENST00000384127 102 ntBASIC0.75□□□□□ -2.29
TOP1P11387 MIR15B-201ENST00000385045 98 ntBASIC0.75□□□□□ -2.29
TOP1P11387 MIR605-201ENST00000385078 83 ntBASIC0.75□□□□□ -2.29
TOP1P11387 MIR802-201ENST00000390235 94 ntBASIC0.75□□□□□ -2.29
TOP1P11387 RNU6-1228P-201ENST00000391014 107 ntBASIC0.75□□□□□ -2.29
TOP1P11387 SNORA75.2-201ENST00000391138 150 ntBASIC0.75□□□□□ -2.29
TOP1P11387 SNORA75.3-201ENST00000391231 150 ntBASIC0.75□□□□□ -2.29
TOP1P11387 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
TOP1P11387 Y_RNA.622-201ENST00000411091 108 ntBASIC0.75□□□□□ -2.29
TOP1P11387 RNU2-55P-201ENST00000411146 174 ntBASIC0.75□□□□□ -2.29
TOP1P11387 Y_RNA.626-201ENST00000411288 95 ntBASIC0.75□□□□□ -2.29
TOP1P11387 RPL39P39-201ENST00000455840 151 ntBASIC0.75□□□□□ -2.29
TOP1P11387 RNU7-21P-201ENST00000459430 62 ntBASIC0.75□□□□□ -2.29
TOP1P11387 RNU6-1023P-201ENST00000516137 106 ntBASIC0.75□□□□□ -2.29
TOP1P11387 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
TOP1P11387 RNY1-201ENST00000364228 113 ntBASIC0.74□□□□□ -2.29
TOP1P11387 Y_RNA.242-201ENST00000364473 110 ntBASIC0.74□□□□□ -2.29
TOP1P11387 RNU1-133P-201ENST00000364867 167 ntBASIC0.74□□□□□ -2.29
TOP1P11387 Y_RNA.478-201ENST00000384358 107 ntBASIC0.74□□□□□ -2.29
TOP1P11387 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.74□□□□□ -2.29
TOP1P11387 RNU6-693P-201ENST00000516134 107 ntBASIC0.74□□□□□ -2.29
TOP1P11387 MIR4662B-201ENST00000579498 81 ntBASIC0.74□□□□□ -2.29
TOP1P11387 MIR4308-201ENST00000580634 81 ntBASIC0.74□□□□□ -2.29
TOP1P11387 AC097639.2-201ENST00000603159 172 ntBASIC0.74□□□□□ -2.29
TOP1P11387 AC008133.2-201ENST00000624540 351 ntBASIC0.74□□□□□ -2.29
TOP1P11387 AC023934.1-201ENST00000574529 2389 ntBASIC0.74□□□□□ -2.29
TOP1P11387 Y_RNA.23-201ENST00000362496 106 ntBASIC0.73□□□□□ -2.29
TOP1P11387 RNU6-888P-201ENST00000363010 101 ntBASIC0.73□□□□□ -2.29
TOP1P11387 SNORD45.3-201ENST00000363836 72 ntBASIC0.73□□□□□ -2.29
TOP1P11387 SNORD115-28-201ENST00000363931 81 ntBASIC0.73□□□□□ -2.29
TOP1P11387 Y_RNA.308-201ENST00000365043 101 ntBASIC0.73□□□□□ -2.29
TOP1P11387 Y_RNA.370-201ENST00000365589 108 ntBASIC0.73□□□□□ -2.29
TOP1P11387 SNORD24-201ENST00000383884 75 ntBASIC0.73□□□□□ -2.29
TOP1P11387 Y_RNA.537-201ENST00000384626 109 ntBASIC0.73□□□□□ -2.29
TOP1P11387 MIR489-201ENST00000384923 84 ntBASIC0.73□□□□□ -2.29
TOP1P11387 AF228730.3-201ENST00000436691 102 ntBASIC0.73□□□□□ -2.29
TOP1P11387 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.73□□□□□ -2.29
TOP1P11387 RNU6-1299P-201ENST00000516316 100 ntBASIC0.73□□□□□ -2.29
TOP1P11387 RNA5SP255-201ENST00000516370 107 ntBASIC0.73□□□□□ -2.29
TOP1P11387 MIR4791-201ENST00000607666 84 ntBASIC0.73□□□□□ -2.29
TOP1P11387 MTND1P7-201ENST00000632801 297 ntBASIC0.73□□□□□ -2.29
TOP1P11387 MIR4251-201ENST00000635819 61 ntBASIC0.73□□□□□ -2.29
TOP1P11387 Y_RNA.37-201ENST00000362606 108 ntBASIC0.72□□□□□ -2.29
TOP1P11387 RNU6-923P-201ENST00000364753 107 ntBASIC0.72□□□□□ -2.29
TOP1P11387 RNU4-17P-201ENST00000365598 141 ntBASIC0.72□□□□□ -2.29
TOP1P11387 SNORA24-201ENST00000384096 131 ntBASIC0.72□□□□□ -2.29
TOP1P11387 SNORA1-201ENST00000384107 130 ntBASIC0.72□□□□□ -2.29
TOP1P11387 RNU6-110P-201ENST00000384508 104 ntBASIC0.72□□□□□ -2.29
TOP1P11387 RNU6-493P-201ENST00000391321 108 ntBASIC0.72□□□□□ -2.29
TOP1P11387 RNA5SP436-201ENST00000516020 115 ntBASIC0.72□□□□□ -2.29
TOP1P11387 RNA5SP153-201ENST00000516498 76 ntBASIC0.72□□□□□ -2.29
TOP1P11387 SNORD36C-201ENST00000516733 66 ntBASIC0.72□□□□□ -2.29
TOP1P11387 RNU6-365P-201ENST00000517113 106 ntBASIC0.72□□□□□ -2.29
TOP1P11387 RNU6-1270P-201ENST00000517128 108 ntBASIC0.72□□□□□ -2.29
TOP1P11387 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
TOP1P11387 AC004817.2-201ENST00000561794 651 ntBASIC0.72□□□□□ -2.29
TOP1P11387 MIR548AO-201ENST00000579992 96 ntBASIC0.72□□□□□ -2.29
TOP1P11387 MIR6515-201ENST00000619843 57 ntBASIC0.72□□□□□ -2.29
TOP1P11387 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
TOP1P11387 Y_RNA.432-201ENST00000384087 111 ntBASIC0.71□□□□□ -2.3
TOP1P11387 RNU4-43P-201ENST00000410628 137 ntBASIC0.71□□□□□ -2.3
TOP1P11387 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.71□□□□□ -2.3
TOP1P11387 RNU4-71P-201ENST00000516258 113 ntBASIC0.71□□□□□ -2.3
TOP1P11387 SNORA18.4-201ENST00000516440 124 ntBASIC0.71□□□□□ -2.3
TOP1P11387 RNU6-504P-201ENST00000516568 104 ntBASIC0.71□□□□□ -2.3
TOP1P11387 AC109810.1-201ENST00000534066 224 ntBASIC0.71□□□□□ -2.3
TOP1P11387 MIR4744-201ENST00000581563 82 ntBASIC0.71□□□□□ -2.3
TOP1P11387 SEPT14P17-201ENST00000617978 177 ntBASIC0.71□□□□□ -2.3
TOP1P11387 AC243994.1-201ENST00000618627 109 ntBASIC0.71□□□□□ -2.3
TOP1P11387 MIR6516-201ENST00000630554 81 ntBASIC0.71□□□□□ -2.3
TOP1P11387 MIR376A2-201ENST00000636782 80 ntBASIC0.71□□□□□ -2.3
TOP1P11387 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.71□□□□□ -2.3
TOP1P11387 MIR103A2-201ENST00000362154 78 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 400.7 ms