Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 Y_RNA.98-201ENST00000363109 102 ntBASIC2.81□□□□□ -1.96
THBS1P07996 Y_RNA.510-201ENST00000384511 114 ntBASIC2.81□□□□□ -1.96
THBS1P07996 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.81□□□□□ -1.96
THBS1P07996 RPL31P63-201ENST00000422565 375 ntBASIC2.81□□□□□ -1.96
THBS1P07996 RN7SL633P-201ENST00000488974 297 ntBASIC2.81□□□□□ -1.96
THBS1P07996 RNU6-826P-201ENST00000516827 104 ntBASIC2.81□□□□□ -1.96
THBS1P07996 MIR5094-201ENST00000578766 85 ntBASIC2.81□□□□□ -1.96
THBS1P07996 MIR548AR-201ENST00000582191 57 ntBASIC2.81□□□□□ -1.96
THBS1P07996 UBL5P2-201ENST00000583788 219 ntBASIC2.81□□□□□ -1.96
THBS1P07996 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.81□□□□□ -1.96
THBS1P07996 SEPT14P17-201ENST00000617978 177 ntBASIC2.81□□□□□ -1.96
THBS1P07996 AL513423.1-201ENST00000621695 132 ntBASIC2.81□□□□□ -1.96
THBS1P07996 Y_RNA.448-201ENST00000384185 108 ntBASIC2.8□□□□□ -1.96
THBS1P07996 SNORD67-201ENST00000390833 111 ntBASIC2.8□□□□□ -1.96
THBS1P07996 RNU6-1086P-201ENST00000410930 100 ntBASIC2.8□□□□□ -1.96
THBS1P07996 SPINT5P-201ENST00000448174 155 ntBASIC2.8□□□□□ -1.96
THBS1P07996 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
THBS1P07996 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
THBS1P07996 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
THBS1P07996 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
THBS1P07996 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.79□□□□□ -1.96
THBS1P07996 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
THBS1P07996 SNORD115-3-201ENST00000363100 82 ntBASIC2.79□□□□□ -1.96
THBS1P07996 Y_RNA.173-201ENST00000363776 113 ntBASIC2.79□□□□□ -1.96
THBS1P07996 RNU6-524P-201ENST00000384270 107 ntBASIC2.79□□□□□ -1.96
THBS1P07996 Y_RNA.545-201ENST00000384652 105 ntBASIC2.79□□□□□ -1.96
THBS1P07996 UBBP3-201ENST00000445497 241 ntBASIC2.79□□□□□ -1.96
THBS1P07996 U7.4-201ENST00000614961 63 ntBASIC2.79□□□□□ -1.96
THBS1P07996 SCARNA15.3-201ENST00000626315 122 ntBASIC2.79□□□□□ -1.96
THBS1P07996 SCARNA4.1-201ENST00000628597 123 ntBASIC2.79□□□□□ -1.96
THBS1P07996 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
THBS1P07996 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
THBS1P07996 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.78□□□□□ -1.96
THBS1P07996 RNU6-342P-201ENST00000384521 104 ntBASIC2.78□□□□□ -1.96
THBS1P07996 MIR889-201ENST00000401280 79 ntBASIC2.78□□□□□ -1.96
THBS1P07996 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.78□□□□□ -1.96
THBS1P07996 MTND5P40-201ENST00000559945 246 ntBASIC2.78□□□□□ -1.96
THBS1P07996 MIR8055-201ENST00000610739 97 ntBASIC2.78□□□□□ -1.96
THBS1P07996 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.78□□□□□ -1.96
THBS1P07996 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.77□□□□□ -1.97
THBS1P07996 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
THBS1P07996 MIR22-201ENST00000362190 85 ntBASIC2.77□□□□□ -1.97
THBS1P07996 Y_RNA.168-201ENST00000363740 102 ntBASIC2.77□□□□□ -1.97
THBS1P07996 SNORA80A-201ENST00000363922 136 ntBASIC2.77□□□□□ -1.97
THBS1P07996 SNORD115-27-201ENST00000364430 82 ntBASIC2.77□□□□□ -1.97
THBS1P07996 SNORD28B-201ENST00000390993 75 ntBASIC2.77□□□□□ -1.97
THBS1P07996 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.77□□□□□ -1.97
THBS1P07996 AC093850.1-201ENST00000454121 251 ntBASIC2.77□□□□□ -1.97
THBS1P07996 RNU7-48P-201ENST00000458875 63 ntBASIC2.77□□□□□ -1.97
THBS1P07996 RNU1-98P-201ENST00000458992 160 ntBASIC2.77□□□□□ -1.97
THBS1P07996 RNU7-79P-201ENST00000516082 62 ntBASIC2.77□□□□□ -1.97
THBS1P07996 RNA5SP341-201ENST00000516261 117 ntBASIC2.77□□□□□ -1.97
THBS1P07996 SNORD67.1-201ENST00000516618 108 ntBASIC2.77□□□□□ -1.97
THBS1P07996 AC140658.3-201ENST00000567603 271 ntBASIC2.77□□□□□ -1.97
THBS1P07996 AL513043.2-201ENST00000573941 143 ntBASIC2.77□□□□□ -1.97
THBS1P07996 MIR4513-201ENST00000581077 86 ntBASIC2.77□□□□□ -1.97
THBS1P07996 FAM106DP-201ENST00000586416 501 ntBASIC2.77□□□□□ -1.97
THBS1P07996 AL033523.1-201ENST00000605153 153 ntBASIC2.77□□□□□ -1.97
THBS1P07996 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.77□□□□□ -1.97
THBS1P07996 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
THBS1P07996 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
THBS1P07996 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
THBS1P07996 RNA5SP138-201ENST00000365098 114 ntBASIC2.76□□□□□ -1.97
THBS1P07996 SNORA44-201ENST00000384584 132 ntBASIC2.76□□□□□ -1.97
THBS1P07996 Y_RNA.565-201ENST00000384719 101 ntBASIC2.76□□□□□ -1.97
THBS1P07996 MIR520A-201ENST00000384862 85 ntBASIC2.76□□□□□ -1.97
THBS1P07996 MIR660-201ENST00000385235 97 ntBASIC2.76□□□□□ -1.97
THBS1P07996 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
THBS1P07996 RPL23AP6-201ENST00000446637 472 ntBASIC2.76□□□□□ -1.97
THBS1P07996 RPL12P50-201ENST00000603116 116 ntBASIC2.76□□□□□ -1.97
THBS1P07996 SNORD14A-201ENST00000606526 91 ntBASIC2.76□□□□□ -1.97
THBS1P07996 AC012676.2-201ENST00000619258 186 ntBASIC2.76□□□□□ -1.97
THBS1P07996 MIR8065-201ENST00000620577 100 ntBASIC2.76□□□□□ -1.97
THBS1P07996 AC007318.2-201ENST00000620999 243 ntBASIC2.76□□□□□ -1.97
THBS1P07996 AP001362.1-201ENST00000625165 124 ntBASIC2.76□□□□□ -1.97
THBS1P07996 Z97988.1-201ENST00000637697 135 ntBASIC2.76□□□□□ -1.97
THBS1P07996 MIR422A-201ENST00000362286 90 ntBASIC2.75□□□□□ -1.97
THBS1P07996 SNORD56.5-201ENST00000364281 72 ntBASIC2.75□□□□□ -1.97
THBS1P07996 SNORA54-201ENST00000384281 123 ntBASIC2.75□□□□□ -1.97
THBS1P07996 RNU6-1307P-201ENST00000391012 103 ntBASIC2.75□□□□□ -1.97
THBS1P07996 MIR1236-201ENST00000408340 102 ntBASIC2.75□□□□□ -1.97
THBS1P07996 RNU6-519P-201ENST00000410590 108 ntBASIC2.75□□□□□ -1.97
THBS1P07996 RNU2-7P-201ENST00000410794 178 ntBASIC2.75□□□□□ -1.97
THBS1P07996 AP004217.1-201ENST00000480579 346 ntBASIC2.75□□□□□ -1.97
THBS1P07996 RNU7-43P-201ENST00000516554 64 ntBASIC2.75□□□□□ -1.97
THBS1P07996 RNU7-137P-201ENST00000516788 62 ntBASIC2.75□□□□□ -1.97
THBS1P07996 CYP3A52P-201ENST00000563326 91 ntBASIC2.75□□□□□ -1.97
THBS1P07996 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.75□□□□□ -1.97
THBS1P07996 MIR6852-201ENST00000621699 66 ntBASIC2.75□□□□□ -1.97
THBS1P07996 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.75□□□□□ -1.97
THBS1P07996 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
THBS1P07996 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
THBS1P07996 RNU6-380P-201ENST00000410207 107 ntBASIC2.74□□□□□ -1.97
THBS1P07996 RNU6-613P-201ENST00000410412 108 ntBASIC2.74□□□□□ -1.97
THBS1P07996 HMGN1P33-201ENST00000432945 451 ntBASIC2.74□□□□□ -1.97
THBS1P07996 RNA5SP481-201ENST00000516814 122 ntBASIC2.74□□□□□ -1.97
THBS1P07996 SNORA74.3-201ENST00000517108 154 ntBASIC2.74□□□□□ -1.97
THBS1P07996 AC107016.2-201ENST00000547968 190 ntBASIC2.74□□□□□ -1.97
THBS1P07996 MIR4709-201ENST00000577272 72 ntBASIC2.74□□□□□ -1.97
THBS1P07996 MIR3126-201ENST00000577443 74 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 228.3 ms