Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MIR4709-201ENST00000577272 72 ntBASIC1.95□□□□□ -2.1
HLA-DOAP06340 MIR5694-201ENST00000581190 76 ntBASIC1.95□□□□□ -2.1
HLA-DOAP06340 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DOAP06340 AC027279.3-201ENST00000625055 122 ntBASIC1.95□□□□□ -2.1
HLA-DOAP06340 U6.95-201ENST00000636931 70 ntBASIC1.95□□□□□ -2.1
HLA-DOAP06340 RNU6-349P-201ENST00000362402 107 ntBASIC1.94□□□□□ -2.1
HLA-DOAP06340 Y_RNA.242-201ENST00000364473 110 ntBASIC1.94□□□□□ -2.1
HLA-DOAP06340 Y_RNA.351-201ENST00000365436 96 ntBASIC1.94□□□□□ -2.1
HLA-DOAP06340 SNORD38C-201ENST00000384381 69 ntBASIC1.94□□□□□ -2.1
HLA-DOAP06340 MIR526A1-201ENST00000384897 85 ntBASIC1.94□□□□□ -2.1
HLA-DOAP06340 HMGN2P38-201ENST00000423806 265 ntBASIC1.94□□□□□ -2.1
HLA-DOAP06340 HMGN2P19-201ENST00000425149 265 ntBASIC1.94□□□□□ -2.1
HLA-DOAP06340 RNU6-589P-201ENST00000516485 107 ntBASIC1.94□□□□□ -2.1
HLA-DOAP06340 Y_RNA.709-201ENST00000516952 92 ntBASIC1.94□□□□□ -2.1
HLA-DOAP06340 MIR4498-201ENST00000577599 66 ntBASIC1.94□□□□□ -2.1
HLA-DOAP06340 SNORD53B-201ENST00000577887 78 ntBASIC1.94□□□□□ -2.1
HLA-DOAP06340 MIR4303-201ENST00000581299 66 ntBASIC1.94□□□□□ -2.1
HLA-DOAP06340 AL137067.1-201ENST00000615933 120 ntBASIC1.94□□□□□ -2.1
HLA-DOAP06340 AL121890.5-201ENST00000620848 304 ntBASIC1.94□□□□□ -2.1
HLA-DOAP06340 RNU6-153P-201ENST00000364422 104 ntBASIC1.93□□□□□ -2.1
HLA-DOAP06340 Y_RNA.241-201ENST00000364470 117 ntBASIC1.93□□□□□ -2.1
HLA-DOAP06340 RNU4-16P-201ENST00000364737 141 ntBASIC1.93□□□□□ -2.1
HLA-DOAP06340 SNORA22-201ENST00000383907 134 ntBASIC1.93□□□□□ -2.1
HLA-DOAP06340 SNORA6-201ENST00000384033 151 ntBASIC1.93□□□□□ -2.1
HLA-DOAP06340 MIR548A3-201ENST00000385297 97 ntBASIC1.93□□□□□ -2.1
HLA-DOAP06340 MT-TI-201ENST00000387365 69 ntBASIC1.93□□□□□ -2.1
HLA-DOAP06340 RNU4-62P-201ENST00000410125 130 ntBASIC1.93□□□□□ -2.1
HLA-DOAP06340 RPS26P48-201ENST00000491713 339 ntBASIC1.93□□□□□ -2.1
HLA-DOAP06340 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
HLA-DOAP06340 AC024614.2-201ENST00000577584 372 ntBASIC1.93□□□□□ -2.1
HLA-DOAP06340 AL670379.3-201ENST00000605040 251 ntBASIC1.93□□□□□ -2.1
HLA-DOAP06340 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DOAP06340 AL596211.1-201ENST00000569873 2277 ntBASIC1.93□□□□□ -2.1
HLA-DOAP06340 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
HLA-DOAP06340 RNU6-833P-201ENST00000363486 107 ntBASIC1.92□□□□□ -2.1
HLA-DOAP06340 RNU6-203P-201ENST00000384038 104 ntBASIC1.92□□□□□ -2.1
HLA-DOAP06340 RNU6-439P-201ENST00000384188 106 ntBASIC1.92□□□□□ -2.1
HLA-DOAP06340 RNU4-52P-201ENST00000384209 138 ntBASIC1.92□□□□□ -2.1
HLA-DOAP06340 SNORD116-21-201ENST00000384507 92 ntBASIC1.92□□□□□ -2.1
HLA-DOAP06340 Y_RNA.528-201ENST00000384575 108 ntBASIC1.92□□□□□ -2.1
HLA-DOAP06340 MIR570-201ENST00000384917 97 ntBASIC1.92□□□□□ -2.1
HLA-DOAP06340 BTF3P4-201ENST00000418852 495 ntBASIC1.92□□□□□ -2.1
HLA-DOAP06340 Y_RNA.649-201ENST00000459077 103 ntBASIC1.92□□□□□ -2.1
HLA-DOAP06340 RNU7-45P-201ENST00000459460 63 ntBASIC1.92□□□□□ -2.1
HLA-DOAP06340 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DOAP06340 PDCD5P2-201ENST00000507570 312 ntBASIC1.92□□□□□ -2.1
HLA-DOAP06340 MIR4448-201ENST00000584360 86 ntBASIC1.92□□□□□ -2.1
HLA-DOAP06340 snoU13.31-201ENST00000607291 104 ntBASIC1.92□□□□□ -2.1
HLA-DOAP06340 AC091932.4-201ENST00000623386 200 ntBASIC1.92□□□□□ -2.1
HLA-DOAP06340 RNU6-690P-201ENST00000365242 106 ntBASIC1.91□□□□□ -2.1
HLA-DOAP06340 RNU6-950P-201ENST00000384651 107 ntBASIC1.91□□□□□ -2.1
HLA-DOAP06340 SNORD28B-201ENST00000390993 75 ntBASIC1.91□□□□□ -2.1
HLA-DOAP06340 U8.17-201ENST00000391292 132 ntBASIC1.91□□□□□ -2.1
HLA-DOAP06340 PGBD4P5-201ENST00000445958 426 ntBASIC1.91□□□□□ -2.1
HLA-DOAP06340 RNA5SP481-201ENST00000516814 122 ntBASIC1.91□□□□□ -2.1
HLA-DOAP06340 AC022523.2-201ENST00000561045 150 ntBASIC1.91□□□□□ -2.1
HLA-DOAP06340 AC095038.3-201ENST00000634439 195 ntBASIC1.91□□□□□ -2.1
HLA-DOAP06340 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.9□□□□□ -2.1
HLA-DOAP06340 RNU1-133P-201ENST00000364867 167 ntBASIC1.9□□□□□ -2.11
HLA-DOAP06340 RNU6-1104P-201ENST00000384723 104 ntBASIC1.9□□□□□ -2.11
HLA-DOAP06340 AC063976.4-201ENST00000421971 163 ntBASIC1.9□□□□□ -2.11
HLA-DOAP06340 RNU6-830P-201ENST00000516353 107 ntBASIC1.9□□□□□ -2.11
HLA-DOAP06340 RNY4P20-201ENST00000516678 93 ntBASIC1.9□□□□□ -2.11
HLA-DOAP06340 AC090821.2-201ENST00000523552 176 ntBASIC1.9□□□□□ -2.11
HLA-DOAP06340 BX248123.2-201ENST00000606318 124 ntBASIC1.9□□□□□ -2.11
HLA-DOAP06340 AL773524.1-201ENST00000614065 229 ntBASIC1.9□□□□□ -2.11
HLA-DOAP06340 SNORD3E-202ENST00000627253 216 ntBASIC1.9□□□□□ -2.11
HLA-DOAP06340 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DOAP06340 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HLA-DOAP06340 SNORD48-201ENST00000364953 64 ntBASIC1.89□□□□□ -2.11
HLA-DOAP06340 SNORA27-201ENST00000384323 126 ntBASIC1.89□□□□□ -2.11
HLA-DOAP06340 Y_RNA.549-201ENST00000384657 102 ntBASIC1.89□□□□□ -2.11
HLA-DOAP06340 MIR660-201ENST00000385235 97 ntBASIC1.89□□□□□ -2.11
HLA-DOAP06340 MIR1267-201ENST00000408723 78 ntBASIC1.89□□□□□ -2.11
HLA-DOAP06340 AC087499.4-201ENST00000448505 178 ntBASIC1.89□□□□□ -2.11
HLA-DOAP06340 RNU6-1053P-201ENST00000515930 101 ntBASIC1.89□□□□□ -2.11
HLA-DOAP06340 SUMO2P16-201ENST00000519475 264 ntBASIC1.89□□□□□ -2.11
HLA-DOAP06340 MIR4287-201ENST00000579398 78 ntBASIC1.89□□□□□ -2.11
HLA-DOAP06340 AL512598.1-201ENST00000610158 273 ntBASIC1.89□□□□□ -2.11
HLA-DOAP06340 MIR6840-201ENST00000611937 71 ntBASIC1.89□□□□□ -2.11
HLA-DOAP06340 AC106754.2-201ENST00000623006 233 ntBASIC1.89□□□□□ -2.11
HLA-DOAP06340 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.89□□□□□ -2.11
HLA-DOAP06340 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.89□□□□□ -2.11
HLA-DOAP06340 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HLA-DOAP06340 Y_RNA.346-201ENST00000365385 112 ntBASIC1.88□□□□□ -2.11
HLA-DOAP06340 RNU6-360P-201ENST00000390944 104 ntBASIC1.88□□□□□ -2.11
HLA-DOAP06340 RNA5SP212-201ENST00000391223 107 ntBASIC1.88□□□□□ -2.11
HLA-DOAP06340 AP1B1P2-201ENST00000416196 106 ntBASIC1.88□□□□□ -2.11
HLA-DOAP06340 AC011753.1-201ENST00000451001 220 ntBASIC1.88□□□□□ -2.11
HLA-DOAP06340 RNU2-35P-201ENST00000516446 142 ntBASIC1.88□□□□□ -2.11
HLA-DOAP06340 RNU6-113P-201ENST00000516653 101 ntBASIC1.88□□□□□ -2.11
HLA-DOAP06340 RNU7-70P-201ENST00000516941 66 ntBASIC1.88□□□□□ -2.11
HLA-DOAP06340 DNAJC19P9-201ENST00000555084 351 ntBASIC1.88□□□□□ -2.11
HLA-DOAP06340 AC021443.1-201ENST00000604478 211 ntBASIC1.88□□□□□ -2.11
HLA-DOAP06340 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.88□□□□□ -2.11
HLA-DOAP06340 RNU1-42P-201ENST00000364033 160 ntBASIC1.87□□□□□ -2.11
HLA-DOAP06340 RNU6-60P-201ENST00000364792 103 ntBASIC1.87□□□□□ -2.11
HLA-DOAP06340 RNY1P6-201ENST00000384193 109 ntBASIC1.87□□□□□ -2.11
HLA-DOAP06340 SNORA67.6-201ENST00000391093 99 ntBASIC1.87□□□□□ -2.11
HLA-DOAP06340 RNU7-123P-201ENST00000515911 60 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms