Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 RNU7-96P-201ENST00000459535 64 ntBASIC-1.03□□□□□ -2.57
TCRBP04435 MIR1244-1-201ENST00000612829 85 ntBASIC-1.03□□□□□ -2.57
TCRBP04435 MIR1244-3-201ENST00000635744 85 ntBASIC-1.03□□□□□ -2.57
TCRBP04435 MIR1244-2-201ENST00000636449 85 ntBASIC-1.03□□□□□ -2.57
TCRBP04435 MIR1244-4-202ENST00000636813 85 ntBASIC-1.03□□□□□ -2.57
TCRBP04435 RNU6-626P-201ENST00000363354 107 ntBASIC-1.04□□□□□ -2.58
TCRBP04435 RNU6-865P-201ENST00000364772 107 ntBASIC-1.04□□□□□ -2.58
TCRBP04435 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.04□□□□□ -2.58
TCRBP04435 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.04□□□□□ -2.58
TCRBP04435 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.04□□□□□ -2.58
TCRBP04435 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.04□□□□□ -2.58
TCRBP04435 AC091951.2-201ENST00000500762 203 ntBASIC-1.04□□□□□ -2.58
TCRBP04435 MIR4473-201ENST00000583731 91 ntBASIC-1.04□□□□□ -2.58
TCRBP04435 AC005357.1-201ENST00000588399 301 ntBASIC-1.04□□□□□ -2.58
TCRBP04435 DEFB117-201ENST00000602356 141 ntBASIC-1.04□□□□□ -2.58
TCRBP04435 RNA5SP403-201ENST00000363598 108 ntBASIC-1.05□□□□□ -2.58
TCRBP04435 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.05□□□□□ -2.58
TCRBP04435 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.05□□□□□ -2.58
TCRBP04435 MTND2P22-201ENST00000444325 1033 ntBASIC-1.05□□□□□ -2.58
TCRBP04435 FCF1P4-201ENST00000448326 183 ntBASIC-1.05□□□□□ -2.58
TCRBP04435 RN7SKP298-201ENST00000515950 94 ntBASIC-1.05□□□□□ -2.58
TCRBP04435 MIR4423-201ENST00000580922 80 ntBASIC-1.05□□□□□ -2.58
TCRBP04435 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.05□□□□□ -2.58
TCRBP04435 AC124312.5-201ENST00000604451 268 ntBASIC-1.05□□□□□ -2.58
TCRBP04435 AL360085.1-201ENST00000604713 532 ntBASIC-1.05□□□□□ -2.58
TCRBP04435 AC011476.5-201ENST00000615594 130 ntBASIC-1.05□□□□□ -2.58
TCRBP04435 AC022140.2-201ENST00000623500 188 ntBASIC-1.05□□□□□ -2.58
TCRBP04435 RNU4-58P-201ENST00000363192 141 ntBASIC-1.06□□□□□ -2.58
TCRBP04435 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.06□□□□□ -2.58
TCRBP04435 MIR204-201ENST00000385200 110 ntBASIC-1.06□□□□□ -2.58
TCRBP04435 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.06□□□□□ -2.58
TCRBP04435 RNU6-693P-201ENST00000516134 107 ntBASIC-1.06□□□□□ -2.58
TCRBP04435 AL603755.1-201ENST00000619504 163 ntBASIC-1.06□□□□□ -2.58
TCRBP04435 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.07□□□□□ -2.58
TCRBP04435 SEPT14P3-201ENST00000439401 183 ntBASIC-1.07□□□□□ -2.58
TCRBP04435 AL732372.2-207ENST00000445840 183 ntBASIC-1.07□□□□□ -2.58
TCRBP04435 SEPT14P2-201ENST00000453405 183 ntBASIC-1.07□□□□□ -2.58
TCRBP04435 SNORD5.1-201ENST00000458800 75 ntBASIC-1.07□□□□□ -2.58
TCRBP04435 RNU7-141P-201ENST00000459304 62 ntBASIC-1.07□□□□□ -2.58
TCRBP04435 SEPT14P4-201ENST00000513445 186 ntBASIC-1.07□□□□□ -2.58
TCRBP04435 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.07□□□□□ -2.58
TCRBP04435 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.07□□□□□ -2.58
TCRBP04435 FO082796.1-201ENST00000523795 183 ntBASIC-1.07□□□□□ -2.58
TCRBP04435 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.07□□□□□ -2.58
TCRBP04435 AC022441.3-201ENST00000605737 136 ntBASIC-1.07□□□□□ -2.58
TCRBP04435 AC087752.4-201ENST00000605911 462 ntBASIC-1.07□□□□□ -2.58
TCRBP04435 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.07□□□□□ -2.58
TCRBP04435 MIR302B-201ENST00000362188 73 ntBASIC-1.08□□□□□ -2.58
TCRBP04435 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.08□□□□□ -2.58
TCRBP04435 RNA5SP133-201ENST00000363368 119 ntBASIC-1.08□□□□□ -2.58
TCRBP04435 RNU6-509P-201ENST00000363519 107 ntBASIC-1.08□□□□□ -2.58
TCRBP04435 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.08□□□□□ -2.58
TCRBP04435 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.08□□□□□ -2.58
TCRBP04435 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.08□□□□□ -2.58
TCRBP04435 MIR548A2-201ENST00000384956 97 ntBASIC-1.08□□□□□ -2.58
TCRBP04435 RNU2-14P-201ENST00000411053 191 ntBASIC-1.08□□□□□ -2.58
TCRBP04435 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.08□□□□□ -2.58
TCRBP04435 RNU2-31P-201ENST00000516954 155 ntBASIC-1.08□□□□□ -2.58
TCRBP04435 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.08□□□□□ -2.58
TCRBP04435 DISC2.1-201ENST00000612827 205 ntBASIC-1.08□□□□□ -2.58
TCRBP04435 RNY1P13-201ENST00000365030 105 ntBASIC-1.09□□□□□ -2.58
TCRBP04435 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.09□□□□□ -2.58
TCRBP04435 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.09□□□□□ -2.58
TCRBP04435 MTND3P12-201ENST00000559068 328 ntBASIC-1.09□□□□□ -2.58
TCRBP04435 MIR3145-201ENST00000580727 82 ntBASIC-1.09□□□□□ -2.58
TCRBP04435 AL049861.1-201ENST00000603130 150 ntBASIC-1.09□□□□□ -2.58
TCRBP04435 U6.109-201ENST00000636749 87 ntBASIC-1.09□□□□□ -2.58
TCRBP04435 SNORA18-201ENST00000384416 132 ntBASIC-1.1□□□□□ -2.59
TCRBP04435 MTND4P28-201ENST00000426217 387 ntBASIC-1.1□□□□□ -2.59
TCRBP04435 MTND1P2-201ENST00000430604 821 ntBASIC-1.1□□□□□ -2.59
TCRBP04435 AC023449.1-201ENST00000454464 154 ntBASIC-1.1□□□□□ -2.59
TCRBP04435 AC021146.6-201ENST00000514659 117 ntBASIC-1.1□□□□□ -2.59
TCRBP04435 SCARNA17-201ENST00000516183 144 ntBASIC-1.1□□□□□ -2.59
TCRBP04435 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.11□□□□□ -2.59
TCRBP04435 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.11□□□□□ -2.59
TCRBP04435 MIR196A1-201ENST00000388006 70 ntBASIC-1.11□□□□□ -2.59
TCRBP04435 RNA5SP261-201ENST00000410536 106 ntBASIC-1.11□□□□□ -2.59
TCRBP04435 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.11□□□□□ -2.59
TCRBP04435 AC074085.1-201ENST00000413598 418 ntBASIC-1.11□□□□□ -2.59
TCRBP04435 AL445567.1-201ENST00000439121 144 ntBASIC-1.11□□□□□ -2.59
TCRBP04435 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.11□□□□□ -2.59
TCRBP04435 MIR2053-201ENST00000459295 91 ntBASIC-1.11□□□□□ -2.59
TCRBP04435 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.11□□□□□ -2.59
TCRBP04435 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.11□□□□□ -2.59
TCRBP04435 RN7SKP295-201ENST00000517264 153 ntBASIC-1.11□□□□□ -2.59
TCRBP04435 AC092794.2-201ENST00000620933 563 ntBASIC-1.11□□□□□ -2.59
TCRBP04435 MIR3662-201ENST00000637030 95 ntBASIC-1.11□□□□□ -2.59
TCRBP04435 MIR409-201ENST00000362237 79 ntBASIC-1.12□□□□□ -2.59
TCRBP04435 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.12□□□□□ -2.59
TCRBP04435 SNORA75-201ENST00000384158 137 ntBASIC-1.12□□□□□ -2.59
TCRBP04435 SNORD61-201ENST00000384252 73 ntBASIC-1.12□□□□□ -2.59
TCRBP04435 MIR9-2-201ENST00000384838 87 ntBASIC-1.12□□□□□ -2.59
TCRBP04435 MIR587-201ENST00000384845 96 ntBASIC-1.12□□□□□ -2.59
TCRBP04435 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
TCRBP04435 RNU6-332P-201ENST00000391193 108 ntBASIC-1.12□□□□□ -2.59
TCRBP04435 RNY1P9-201ENST00000532431 109 ntBASIC-1.12□□□□□ -2.59
TCRBP04435 MIR6863-201ENST00000636112 90 ntBASIC-1.12□□□□□ -2.59
TCRBP04435 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.13□□□□□ -2.59
TCRBP04435 RNU6-901P-201ENST00000384593 106 ntBASIC-1.13□□□□□ -2.59
TCRBP04435 SNORD56B-201ENST00000384713 71 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms