Protein–RNA interactions for Protein: O75679

RFPL3, Ret finger protein-like 3, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3O75679 RNU6-958P-201ENST00000516995 106 ntBASIC1.89□□□□□ -2.11
RFPL3O75679 MIR4781-201ENST00000585250 76 ntBASIC1.89□□□□□ -2.11
RFPL3O75679 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.89□□□□□ -2.11
RFPL3O75679 MIR4791-201ENST00000607666 84 ntBASIC1.89□□□□□ -2.11
RFPL3O75679 AL121890.5-201ENST00000620848 304 ntBASIC1.89□□□□□ -2.11
RFPL3O75679 AC008133.2-201ENST00000624540 351 ntBASIC1.89□□□□□ -2.11
RFPL3O75679 Y_RNA.537-201ENST00000384626 109 ntBASIC1.88□□□□□ -2.11
RFPL3O75679 RNU6-460P-201ENST00000391158 108 ntBASIC1.88□□□□□ -2.11
RFPL3O75679 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.88□□□□□ -2.11
RFPL3O75679 AC245517.4-201ENST00000448601 281 ntBASIC1.88□□□□□ -2.11
RFPL3O75679 RPS29P29-201ENST00000456396 171 ntBASIC1.88□□□□□ -2.11
RFPL3O75679 RNU7-96P-201ENST00000459535 64 ntBASIC1.88□□□□□ -2.11
RFPL3O75679 RNU5E-3P-201ENST00000515913 68 ntBASIC1.88□□□□□ -2.11
RFPL3O75679 RNU6-426P-201ENST00000516464 97 ntBASIC1.88□□□□□ -2.11
RFPL3O75679 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RFPL3O75679 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RFPL3O75679 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
RFPL3O75679 AL596211.1-201ENST00000569873 2277 ntBASIC1.88□□□□□ -2.11
RFPL3O75679 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RFPL3O75679 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RFPL3O75679 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
RFPL3O75679 MIR378A-201ENST00000362177 66 ntBASIC1.87□□□□□ -2.11
RFPL3O75679 RNU1-133P-201ENST00000364867 167 ntBASIC1.87□□□□□ -2.11
RFPL3O75679 Y_RNA.494-201ENST00000384432 111 ntBASIC1.87□□□□□ -2.11
RFPL3O75679 SNORA20-201ENST00000384662 132 ntBASIC1.87□□□□□ -2.11
RFPL3O75679 MIR569-201ENST00000385228 96 ntBASIC1.87□□□□□ -2.11
RFPL3O75679 SNORA17.3-201ENST00000391159 129 ntBASIC1.87□□□□□ -2.11
RFPL3O75679 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
RFPL3O75679 AL035398.1-201ENST00000430869 322 ntBASIC1.87□□□□□ -2.11
RFPL3O75679 SNORA25.15-201ENST00000516487 89 ntBASIC1.87□□□□□ -2.11
RFPL3O75679 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.87□□□□□ -2.11
RFPL3O75679 RNU7-53P-201ENST00000516705 60 ntBASIC1.87□□□□□ -2.11
RFPL3O75679 AC091895.1-201ENST00000624494 256 ntBASIC1.87□□□□□ -2.11
RFPL3O75679 MIR376A2-201ENST00000636782 80 ntBASIC1.87□□□□□ -2.11
RFPL3O75679 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
RFPL3O75679 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RFPL3O75679 AL442644.1-201ENST00000454390 3105 ntBASIC1.86□□□□□ -2.11
RFPL3O75679 RNA5SP190-201ENST00000365222 118 ntBASIC1.86□□□□□ -2.11
RFPL3O75679 MIR1287-201ENST00000408492 90 ntBASIC1.86□□□□□ -2.11
RFPL3O75679 RNA5SP272-201ENST00000516095 111 ntBASIC1.86□□□□□ -2.11
RFPL3O75679 RNU6-250P-201ENST00000516958 103 ntBASIC1.86□□□□□ -2.11
RFPL3O75679 AP001328.1-201ENST00000528550 176 ntBASIC1.86□□□□□ -2.11
RFPL3O75679 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
RFPL3O75679 AP001485.1-201ENST00000604799 199 ntBASIC1.86□□□□□ -2.11
RFPL3O75679 MIR337-201ENST00000362281 93 ntBASIC1.85□□□□□ -2.11
RFPL3O75679 Y_RNA.420-201ENST00000384043 110 ntBASIC1.85□□□□□ -2.11
RFPL3O75679 RNU2-11P-201ENST00000459191 187 ntBASIC1.85□□□□□ -2.11
RFPL3O75679 SNORD13-201ENST00000459299 104 ntBASIC1.85□□□□□ -2.11
RFPL3O75679 RN7SKP88-201ENST00000516847 250 ntBASIC1.85□□□□□ -2.11
RFPL3O75679 AL512310.8-201ENST00000550183 120 ntBASIC1.85□□□□□ -2.11
RFPL3O75679 MIR3664-201ENST00000579074 99 ntBASIC1.85□□□□□ -2.11
RFPL3O75679 7SK.8-201ENST00000612110 250 ntBASIC1.85□□□□□ -2.11
RFPL3O75679 7SK.11-201ENST00000615477 250 ntBASIC1.85□□□□□ -2.11
RFPL3O75679 7SK.13-201ENST00000622040 250 ntBASIC1.85□□□□□ -2.11
RFPL3O75679 MIR4251-201ENST00000635819 61 ntBASIC1.85□□□□□ -2.11
RFPL3O75679 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RFPL3O75679 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.84□□□□□ -2.11
RFPL3O75679 U8.1-201ENST00000362843 134 ntBASIC1.84□□□□□ -2.11
RFPL3O75679 Y_RNA.120-201ENST00000363304 110 ntBASIC1.84□□□□□ -2.11
RFPL3O75679 Y_RNA.251-201ENST00000364551 99 ntBASIC1.84□□□□□ -2.11
RFPL3O75679 RNU6-915P-201ENST00000364943 103 ntBASIC1.84□□□□□ -2.11
RFPL3O75679 RNU6-187P-201ENST00000384139 106 ntBASIC1.84□□□□□ -2.11
RFPL3O75679 MIR613-201ENST00000385248 95 ntBASIC1.84□□□□□ -2.11
RFPL3O75679 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RFPL3O75679 RNU7-41P-201ENST00000515917 61 ntBASIC1.84□□□□□ -2.11
RFPL3O75679 Y_RNA.690-201ENST00000516603 95 ntBASIC1.84□□□□□ -2.11
RFPL3O75679 RNU6-902P-201ENST00000517212 91 ntBASIC1.84□□□□□ -2.11
RFPL3O75679 MIR5089-201ENST00000580047 84 ntBASIC1.84□□□□□ -2.11
RFPL3O75679 MIR3683-201ENST00000580847 82 ntBASIC1.84□□□□□ -2.11
RFPL3O75679 MIR4285-201ENST00000581001 85 ntBASIC1.84□□□□□ -2.11
RFPL3O75679 AC012493.3-201ENST00000604494 112 ntBASIC1.84□□□□□ -2.11
RFPL3O75679 AC084768.2-201ENST00000622736 221 ntBASIC1.84□□□□□ -2.11
RFPL3O75679 AC010332.2-201ENST00000613083 1904 ntBASIC1.83□□□□□ -2.12
RFPL3O75679 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RFPL3O75679 RNY1P11-201ENST00000363759 113 ntBASIC1.83□□□□□ -2.12
RFPL3O75679 RNA5SP48-201ENST00000363969 126 ntBASIC1.83□□□□□ -2.12
RFPL3O75679 RPS27P16-201ENST00000425758 201 ntBASIC1.83□□□□□ -2.12
RFPL3O75679 AC003989.2-201ENST00000440224 169 ntBASIC1.83□□□□□ -2.12
RFPL3O75679 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.83□□□□□ -2.12
RFPL3O75679 RNU7-197P-201ENST00000458836 62 ntBASIC1.83□□□□□ -2.12
RFPL3O75679 RNU6-998P-201ENST00000515894 101 ntBASIC1.83□□□□□ -2.12
RFPL3O75679 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.83□□□□□ -2.12
RFPL3O75679 AC091932.4-201ENST00000623386 200 ntBASIC1.83□□□□□ -2.12
RFPL3O75679 Y_RNA.568-201ENST00000384742 113 ntBASIC1.82□□□□□ -2.12
RFPL3O75679 SNORA40-201ENST00000388090 126 ntBASIC1.82□□□□□ -2.12
RFPL3O75679 Y_RNA.692-201ENST00000516627 105 ntBASIC1.82□□□□□ -2.12
RFPL3O75679 SCARNA15-202ENST00000516881 127 ntBASIC1.82□□□□□ -2.12
RFPL3O75679 Y_RNA.757-201ENST00000578934 114 ntBASIC1.82□□□□□ -2.12
RFPL3O75679 AC011603.4-201ENST00000611325 277 ntBASIC1.82□□□□□ -2.12
RFPL3O75679 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.82□□□□□ -2.12
RFPL3O75679 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.81□□□□□ -2.12
RFPL3O75679 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.81□□□□□ -2.12
RFPL3O75679 RNU6-321P-201ENST00000410912 106 ntBASIC1.81□□□□□ -2.12
RFPL3O75679 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.81□□□□□ -2.12
RFPL3O75679 snoU13.16-201ENST00000459350 104 ntBASIC1.81□□□□□ -2.12
RFPL3O75679 Y_RNA.686-201ENST00000516548 134 ntBASIC1.81□□□□□ -2.12
RFPL3O75679 AL096861.1-201ENST00000610899 123 ntBASIC1.81□□□□□ -2.12
RFPL3O75679 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.81□□□□□ -2.12
RFPL3O75679 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.81□□□□□ -2.12
RFPL3O75679 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms